Wall clock time and date at job start Mon Mar 30 2020 05:28:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53002 * 109.47233 * 2 1 4 4 N 1.46497 * 109.47256 * 179.97438 * 3 2 1 5 5 C 1.36801 * 119.99917 * 262.39644 * 4 3 2 6 6 H 1.07999 * 120.00423 * 196.19571 * 5 4 3 7 7 C 1.39097 * 120.00086 * 16.19314 * 5 4 3 8 8 N 1.31337 * 119.99715 * 20.04269 * 7 5 4 9 9 Si 1.86794 * 120.00449 * 200.04054 * 7 5 4 10 10 H 1.48491 * 109.47482 * 89.99892 * 9 7 5 11 11 H 1.48506 * 109.47389 * 210.00636 * 9 7 5 12 12 H 1.48506 * 109.47011 * 329.99920 * 9 7 5 13 13 C 1.34774 * 120.00157 * 82.39578 * 4 3 2 14 14 O 1.21575 * 119.99957 * 182.43951 * 13 4 3 15 15 C 1.47938 * 119.99953 * 2.44932 * 13 4 3 16 16 C 1.39884 * 120.17239 * 172.75085 * 15 13 4 17 17 C 1.38683 * 117.90325 * 179.97438 * 16 15 13 18 18 C 1.38791 * 118.07221 * 359.97438 * 17 16 15 19 19 Cl 1.73609 * 119.97182 * 179.97438 * 18 17 16 20 20 N 1.32272 * 120.05699 * 0.02562 * 18 17 16 21 21 N 1.28352 * 122.28436 * 359.97438 * 20 18 17 22 22 H 1.09003 * 109.47157 * 180.02562 * 1 2 3 23 23 H 1.08991 * 109.47381 * 300.00379 * 1 2 3 24 24 H 1.08998 * 109.46577 * 60.00626 * 1 2 3 25 25 H 1.09004 * 109.47709 * 239.99756 * 2 1 3 26 26 H 1.09002 * 109.47445 * 119.99530 * 2 1 3 27 27 H 1.09004 * 109.46972 * 59.99305 * 3 2 1 28 28 H 1.09008 * 109.46806 * 299.99759 * 3 2 1 29 29 H 0.97004 * 119.99747 * 179.97438 * 8 7 5 30 30 H 1.07997 * 121.04545 * 359.95529 * 16 15 13 31 31 H 1.08002 * 120.95672 * 179.72564 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5050 1.4425 0.0006 5 6 4.1885 1.5995 1.1752 6 1 5.2363 1.8605 1.1596 7 6 3.5339 1.4229 2.3897 8 7 2.4122 0.7414 2.4381 9 14 4.2500 2.1549 3.9520 10 1 3.7151 3.5264 4.1465 11 1 3.8750 1.3079 5.1127 12 1 5.7297 2.2122 3.8387 13 6 4.1794 1.2879 -1.1560 14 8 5.3943 1.2434 -1.1500 15 6 3.4413 1.1725 -2.4329 16 6 4.1348 1.1643 -3.6476 17 6 3.3961 1.0536 -4.8160 18 6 2.0156 0.9572 -4.7093 19 17 1.0427 0.8172 -6.1403 20 7 1.4406 0.9729 -3.5182 21 7 2.1165 1.0751 -2.4319 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3634 0.5138 0.8899 24 1 -0.3632 0.5137 -0.8901 25 1 1.8934 -0.5139 -0.8900 26 1 1.8934 -0.5138 0.8900 27 1 1.6766 1.9564 0.8900 28 1 1.6767 1.9563 -0.8901 29 1 1.9559 0.6179 3.2852 30 1 5.2117 1.2421 -3.6747 31 1 3.8807 1.0467 -5.7812 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000233035570.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:28:09 Heat of formation + Delta-G solvation = 43.039691 kcal Electronic energy + Delta-G solvation = -18645.800402 eV Core-core repulsion = 15569.154217 eV Total energy + Delta-G solvation = -3076.646185 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.067 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.76756 -38.39302 -36.71314 -35.50676 -32.96320 -32.64039 -31.65330 -31.34223 -26.25225 -25.31545 -24.30493 -23.79345 -20.70906 -20.08772 -17.81650 -17.09758 -16.91451 -16.33057 -15.15385 -15.04332 -14.28188 -14.00348 -13.75032 -13.58808 -13.37538 -12.82837 -12.23453 -12.07584 -11.87354 -11.57736 -11.47740 -11.22435 -10.96607 -10.68072 -10.49236 -10.38986 -10.13847 -10.09476 -9.63633 -9.29303 -9.21214 -8.94747 -8.61105 -7.85558 -6.61184 -4.01487 0.71487 0.99744 1.75632 2.99005 3.11826 3.16198 3.33682 3.86312 4.20229 4.33452 4.55594 4.73229 4.92659 5.00616 5.09876 5.34927 5.84730 6.03003 6.14786 6.24993 6.30189 6.51469 6.68352 6.96784 6.97918 7.06694 7.19448 7.41206 7.77657 7.86420 8.26254 8.81210 8.92089 9.12138 9.76524 10.30003 Molecular weight = 269.07amu Principal moments of inertia in cm(-1) A = 0.031464 B = 0.005780 C = 0.005010 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 889.686572 B = 4843.002636 C = 5587.770401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.110 4.110 3 C 0.119 3.881 4 N -0.385 5.385 5 C -0.292 4.292 6 H 0.112 0.888 7 C 0.034 3.966 8 N -0.829 5.829 9 Si 0.933 3.067 10 H -0.273 1.273 11 H -0.280 1.280 12 H -0.265 1.265 13 C 0.452 3.548 14 O -0.598 6.598 15 C 0.055 3.945 16 C -0.068 4.068 17 C -0.117 4.117 18 C 0.095 3.905 19 Cl -0.029 7.029 20 N -0.236 5.236 21 N -0.194 5.194 22 H 0.035 0.965 23 H 0.046 0.954 24 H 0.046 0.954 25 H 0.032 0.968 26 H 0.096 0.904 27 H 0.085 0.915 28 H 0.074 0.926 29 H 0.276 0.724 30 H 0.163 0.837 31 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.949 0.653 -9.079 9.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C -0.148 4.148 3 C -0.005 4.005 4 N -0.097 5.097 5 C -0.422 4.422 6 H 0.130 0.870 7 C -0.174 4.174 8 N -0.465 5.465 9 Si 0.758 3.242 10 H -0.199 1.199 11 H -0.205 1.205 12 H -0.189 1.189 13 C 0.242 3.758 14 O -0.485 6.485 15 C -0.089 4.089 16 C -0.099 4.099 17 C -0.146 4.146 18 C -0.077 4.077 19 Cl -0.001 7.001 20 N -0.081 5.081 21 N -0.042 5.042 22 H 0.054 0.946 23 H 0.065 0.935 24 H 0.065 0.935 25 H 0.051 0.949 26 H 0.114 0.886 27 H 0.103 0.897 28 H 0.092 0.908 29 H 0.087 0.913 30 H 0.181 0.819 31 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -3.990 0.502 -8.122 9.063 hybrid contribution 1.260 0.226 -0.345 1.326 sum -2.730 0.728 -8.466 8.925 Atomic orbital electron populations 1.21521 0.97220 0.99685 1.00566 1.21711 0.94170 0.97331 1.01576 1.21942 0.78756 0.98342 1.01426 1.43991 1.06866 1.53268 1.05562 1.20049 0.97294 1.43001 0.81815 0.87050 1.25554 0.96348 0.95508 1.00038 1.70086 1.16670 1.32012 1.27684 0.85815 0.79855 0.79007 0.79538 1.19862 1.20541 1.18934 1.17035 0.86796 0.89698 0.82302 1.90622 1.12346 1.60102 1.85444 1.23478 0.92119 0.96322 0.96993 1.22359 1.02902 0.94210 0.90395 1.22034 0.92197 0.99630 1.00705 1.23424 0.90415 1.02936 0.90929 1.98381 1.72030 1.96053 1.33617 1.73036 1.32321 1.08576 0.94203 1.74180 1.05748 1.09094 1.15173 0.94565 0.93480 0.93506 0.94926 0.88565 0.89688 0.90837 0.91314 0.81943 0.82779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.48 9.91 37.16 0.37 -2.11 16 2 C -0.11 -2.40 5.06 -26.73 -0.14 -2.54 16 3 C 0.12 2.71 4.14 -4.04 -0.02 2.70 16 4 N -0.39 -9.72 2.64 -115.85 -0.31 -10.03 16 5 C -0.29 -7.63 9.35 -15.02 -0.14 -7.77 16 6 H 0.11 3.02 7.37 -52.49 -0.39 2.64 16 7 C 0.03 0.82 4.92 -17.44 -0.09 0.73 16 8 N -0.83 -19.82 8.43 55.50 0.47 -19.36 16 9 Si 0.93 18.86 29.60 -169.99 -5.03 13.83 16 10 H -0.27 -5.46 7.11 56.52 0.40 -5.06 16 11 H -0.28 -5.58 7.11 56.52 0.40 -5.18 16 12 H -0.27 -5.42 7.11 56.52 0.40 -5.02 16 13 C 0.45 11.22 7.54 -12.29 -0.09 11.12 16 14 O -0.60 -16.19 16.06 5.30 0.09 -16.10 16 15 C 0.05 1.14 6.56 -82.84 -0.54 0.60 16 16 C -0.07 -1.15 9.73 -38.80 -0.38 -1.52 16 17 C -0.12 -1.62 9.99 -39.21 -0.39 -2.01 16 18 C 0.09 1.47 7.37 -17.16 -0.13 1.35 16 19 Cl -0.03 -0.36 29.13 -51.86 -1.51 -1.87 16 20 N -0.24 -4.38 11.50 32.93 0.38 -4.00 16 21 N -0.19 -3.94 5.47 33.31 0.18 -3.76 16 22 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 23 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 24 H 0.05 0.85 8.14 -51.93 -0.42 0.43 16 25 H 0.03 0.74 6.60 -51.93 -0.34 0.39 16 26 H 0.10 2.34 5.96 -51.93 -0.31 2.03 16 27 H 0.08 2.03 6.16 -51.93 -0.32 1.71 16 28 H 0.07 1.64 5.37 -51.92 -0.28 1.36 16 29 H 0.28 6.18 8.31 -40.82 -0.34 5.84 16 30 H 0.16 2.51 7.73 -52.49 -0.41 2.10 16 31 H 0.15 1.51 8.06 -52.49 -0.42 1.09 16 LS Contribution 278.69 15.07 4.20 4.20 Total: -1.00 -27.64 278.69 -5.94 -33.58 By element: Atomic # 1 Polarization: 5.84 SS G_CDS: -2.87 Total: 2.97 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -1.54 Total: 0.54 kcal Atomic # 7 Polarization: -37.87 SS G_CDS: 0.72 Total: -37.14 kcal Atomic # 8 Polarization: -16.19 SS G_CDS: 0.09 Total: -16.10 kcal Atomic # 14 Polarization: 18.86 SS G_CDS: -5.03 Total: 13.83 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -1.51 Total: -1.87 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -27.64 -5.94 -33.58 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000233035570.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.621 kcal (2) G-P(sol) polarization free energy of solvation -27.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.581 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds