Wall clock time and date at job start Mon Mar 30 2020 05:24:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.31899 * 119.03794 * 2 1 4 4 C 1.32290 * 121.01630 * 180.02562 * 3 2 1 5 5 Cl 1.73600 * 120.44506 * 179.97438 * 4 3 2 6 6 C 1.39011 * 119.10711 * 359.97438 * 4 3 2 7 7 C 1.39404 * 118.25577 * 359.97438 * 6 4 3 8 8 C 1.48446 * 120.54609 * 179.97438 * 7 6 4 9 9 O 1.21486 * 120.00107 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00165 * 180.02562 * 8 7 6 11 11 C 1.46506 * 120.00033 * 179.97438 * 10 8 7 12 12 H 1.08998 * 109.46566 * 324.99334 * 11 10 8 13 13 C 1.52997 * 109.47289 * 84.99600 * 11 10 8 14 14 C 1.50697 * 109.47015 * 205.00057 * 11 10 8 15 15 H 1.07998 * 120.00039 * 359.97438 * 14 11 10 16 16 C 1.37880 * 119.99815 * 179.97438 * 14 11 10 17 17 N 1.31517 * 119.99524 * 179.97438 * 16 14 11 18 18 Si 1.86794 * 120.00267 * 359.97438 * 16 14 11 19 19 H 1.48506 * 109.46589 * 89.99875 * 18 16 14 20 20 H 1.48490 * 109.47303 * 209.99928 * 18 16 14 21 21 H 1.48497 * 109.46869 * 330.00523 * 18 16 14 22 22 N 1.31556 * 119.02847 * 180.27147 * 2 1 3 23 23 H 1.09001 * 109.46859 * 89.99938 * 1 2 3 24 24 H 1.08996 * 109.47741 * 210.00319 * 1 2 3 25 25 H 1.09001 * 109.46960 * 330.01011 * 1 2 3 26 26 H 1.08002 * 120.87159 * 180.02562 * 6 4 3 27 27 H 0.96992 * 119.99904 * 359.97438 * 10 8 7 28 28 H 1.09002 * 109.47153 * 179.97438 * 13 11 10 29 29 H 1.09001 * 109.46832 * 60.00146 * 13 11 10 30 30 H 1.09004 * 109.47261 * 300.00128 * 13 11 10 31 31 H 0.97001 * 119.99599 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1472 1.1532 0.0000 4 6 3.4693 1.1989 -0.0005 5 17 4.2968 2.7250 -0.0012 6 6 4.1871 0.0084 -0.0005 7 6 3.4762 -1.1908 0.0006 8 6 4.1913 -2.4917 0.0001 9 8 5.4059 -2.5173 -0.0018 10 7 3.4930 -3.6445 0.0006 11 6 4.1987 -4.9284 -0.0005 12 1 5.1107 -4.8411 -0.5910 13 6 4.5563 -5.3151 1.4360 14 6 3.3116 -5.9887 -0.6001 15 1 2.3210 -5.7321 -0.9455 16 6 3.7646 -7.2865 -0.7079 17 7 2.9901 -8.2119 -1.2308 18 14 5.4781 -7.7303 -0.1112 19 1 5.4159 -8.1334 1.3167 20 1 6.0080 -8.8566 -0.9209 21 1 6.3724 -6.5536 -0.2548 22 7 2.1454 -1.1503 -0.0055 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3634 -0.8899 0.5138 25 1 -0.3633 0.8901 0.5137 26 1 5.2671 0.0124 -0.0005 27 1 2.5233 -3.6241 0.0017 28 1 5.0810 -6.2705 1.4352 29 1 3.6443 -5.4023 2.0265 30 1 5.1980 -4.5481 1.8698 31 1 3.3089 -9.1249 -1.3069 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000723227258.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:24:46 Heat of formation + Delta-G solvation = 8.493289 kcal Electronic energy + Delta-G solvation = -17733.953598 eV Core-core repulsion = 14655.809368 eV Total energy + Delta-G solvation = -3078.144229 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.067 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.45572 -39.05502 -37.22035 -35.25604 -34.04703 -33.30362 -32.40270 -30.00491 -28.79393 -25.77051 -25.18868 -23.44705 -21.51979 -19.97370 -18.52888 -18.06111 -16.55036 -15.89702 -15.72302 -15.60390 -15.24736 -14.62048 -14.28814 -13.90052 -13.30962 -13.23810 -13.02389 -12.65119 -12.26756 -12.24252 -11.91316 -11.82511 -11.39699 -11.18334 -10.88370 -10.67680 -10.27214 -10.18071 -9.74021 -9.67961 -9.39738 -9.30530 -8.82105 -8.33157 -6.24791 -4.28309 0.28608 0.47821 1.24084 2.82261 3.20184 3.27206 3.32716 3.35924 3.59774 3.65594 4.01183 4.27419 4.44775 4.67990 5.09319 5.12761 5.14747 5.33693 5.42680 5.62639 5.96888 6.22927 6.28246 6.43382 6.45981 6.73954 7.05953 7.12130 7.40041 7.60038 8.01386 8.39925 8.57939 8.76276 9.34377 10.87215 Molecular weight = 269.07amu Principal moments of inertia in cm(-1) A = 0.031264 B = 0.004502 C = 0.004055 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 895.391992 B = 6218.568050 C = 6904.187488 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.337 3.663 3 N -0.507 5.507 4 C 0.223 3.777 5 Cl -0.008 7.008 6 C -0.167 4.167 7 C 0.164 3.836 8 C 0.555 3.445 9 O -0.536 6.536 10 N -0.667 5.667 11 C 0.234 3.766 12 H 0.053 0.947 13 C -0.162 4.162 14 C -0.537 4.537 15 H 0.083 0.917 16 C 0.080 3.920 17 N -0.890 5.890 18 Si 0.885 3.115 19 H -0.275 1.275 20 H -0.293 1.293 21 H -0.262 1.262 22 N -0.487 5.487 23 H 0.092 0.908 24 H 0.094 0.906 25 H 0.089 0.911 26 H 0.170 0.830 27 H 0.408 0.592 28 H 0.050 0.950 29 H 0.056 0.944 30 H 0.037 0.963 31 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.961 17.910 3.553 18.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.070 3.930 3 N -0.226 5.226 4 C 0.049 3.951 5 Cl 0.021 6.979 6 C -0.191 4.191 7 C 0.016 3.984 8 C 0.336 3.664 9 O -0.413 6.413 10 N -0.315 5.315 11 C 0.131 3.869 12 H 0.071 0.929 13 C -0.220 4.220 14 C -0.575 4.575 15 H 0.101 0.899 16 C -0.124 4.124 17 N -0.526 5.526 18 Si 0.714 3.286 19 H -0.202 1.202 20 H -0.220 1.220 21 H -0.186 1.186 22 N -0.205 5.205 23 H 0.110 0.890 24 H 0.113 0.887 25 H 0.107 0.893 26 H 0.188 0.812 27 H 0.244 0.756 28 H 0.069 0.931 29 H 0.075 0.925 30 H 0.056 0.944 31 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -2.022 17.725 3.485 18.177 hybrid contribution 1.390 -0.101 0.297 1.425 sum -0.632 17.623 3.782 18.035 Atomic orbital electron populations 1.20662 0.84359 1.04790 1.04570 1.23291 0.98318 0.81620 0.89799 1.67580 1.08445 1.31582 1.14945 1.21994 0.89873 0.88402 0.94840 1.98438 1.75061 1.28481 1.95969 1.22686 1.04242 0.90600 1.01532 1.22097 0.89309 0.95182 0.91849 1.17687 0.86737 0.82827 0.79168 1.90775 1.12517 1.86610 1.51403 1.46155 1.11231 1.05425 1.68644 1.19280 0.94377 0.79887 0.93382 0.92949 1.22462 1.00554 0.99684 0.99336 1.20995 1.02629 0.92039 1.41846 0.89931 1.24814 0.97380 0.95942 0.94255 1.69864 1.36618 1.02359 1.43773 0.86889 0.85006 0.78413 0.78294 1.20194 1.22034 1.18626 1.68302 1.08879 1.30415 1.12907 0.88956 0.88694 0.89262 0.81214 0.75610 0.93112 0.92536 0.94419 0.92187 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.73 10.31 36.01 0.37 -0.36 16 2 C 0.34 4.26 7.64 -157.31 -1.20 3.06 16 3 N -0.51 -6.59 10.31 -7.86 -0.08 -6.68 16 4 C 0.22 2.85 7.34 -17.07 -0.13 2.72 16 5 Cl -0.01 -0.08 29.16 -51.86 -1.51 -1.60 16 6 C -0.17 -2.29 9.53 -38.86 -0.37 -2.66 16 7 C 0.16 2.60 6.79 -82.66 -0.56 2.04 16 8 C 0.55 10.58 7.79 -12.05 -0.09 10.48 16 9 O -0.54 -11.47 16.09 5.38 0.09 -11.38 16 10 N -0.67 -13.44 5.06 -55.69 -0.28 -13.73 16 11 C 0.23 5.47 2.15 -69.08 -0.15 5.32 16 12 H 0.05 1.33 6.63 -51.93 -0.34 0.98 16 13 C -0.16 -3.53 8.97 37.16 0.33 -3.20 16 14 C -0.54 -14.30 9.31 -34.44 -0.32 -14.62 16 15 H 0.08 2.33 7.98 -52.49 -0.42 1.91 16 16 C 0.08 2.21 5.45 -17.82 -0.10 2.11 16 17 N -0.89 -25.94 13.96 55.43 0.77 -25.17 16 18 Si 0.88 21.22 24.38 -169.99 -4.14 17.08 16 19 H -0.28 -6.38 6.87 56.52 0.39 -5.99 16 20 H -0.29 -7.02 7.11 56.52 0.40 -6.62 16 21 H -0.26 -6.19 6.53 56.52 0.37 -5.82 16 22 N -0.49 -7.16 9.60 -7.34 -0.07 -7.23 16 23 H 0.09 0.69 8.14 -51.93 -0.42 0.26 16 24 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 25 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 26 H 0.17 2.15 7.73 -52.49 -0.41 1.74 16 27 H 0.41 7.65 7.92 -40.82 -0.32 7.32 16 28 H 0.05 1.14 3.27 -51.93 -0.17 0.97 16 29 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 30 H 0.04 0.76 8.14 -51.93 -0.42 0.34 16 31 H 0.27 7.34 8.31 -40.82 -0.34 7.00 16 LS Contribution 286.90 15.07 4.32 4.32 Total: -1.00 -30.03 286.90 -6.08 -36.11 By element: Atomic # 1 Polarization: 6.33 SS G_CDS: -2.96 Total: 3.37 kcal Atomic # 6 Polarization: 7.11 SS G_CDS: -2.21 Total: 4.90 kcal Atomic # 7 Polarization: -53.14 SS G_CDS: 0.34 Total: -52.80 kcal Atomic # 8 Polarization: -11.47 SS G_CDS: 0.09 Total: -11.38 kcal Atomic # 14 Polarization: 21.22 SS G_CDS: -4.14 Total: 17.08 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.51 Total: -1.60 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -30.03 -6.08 -36.11 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000723227258.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.599 kcal (2) G-P(sol) polarization free energy of solvation -30.028 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.570 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.077 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.105 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds