Wall clock time and date at job start Mon Mar 30 2020 05:24:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.34231 * 126.28427 * 2 1 4 4 H 0.97000 * 125.73382 * 0.22858 * 3 2 1 5 5 N 1.39925 * 108.52310 * 180.26385 * 3 2 1 6 6 C 1.30533 * 108.89753 * 0.02562 * 5 3 2 7 7 Cl 1.73595 * 126.00252 * 180.02562 * 6 5 3 8 8 C 1.38075 * 126.27809 * 180.31259 * 2 1 3 9 9 C 1.47382 * 126.42283 * 359.69731 * 8 2 1 10 10 O 1.21614 * 119.99677 * 90.00263 * 9 8 2 11 11 N 1.34778 * 120.00209 * 270.00213 * 9 8 2 12 12 C 1.47062 * 136.05818 * 359.62841 * 11 9 8 13 13 C 1.53237 * 88.08603 * 207.20432 * 12 11 9 14 14 C 1.50691 * 114.32970 * 220.47040 * 13 12 11 15 15 H 1.07997 * 120.00490 * 93.75319 * 14 13 12 16 16 C 1.37879 * 120.00147 * 273.75978 * 14 13 12 17 17 N 1.31516 * 120.00205 * 179.97438 * 16 14 13 18 18 Si 1.86805 * 119.99871 * 359.97438 * 16 14 13 19 19 H 1.48501 * 109.47033 * 89.99911 * 18 16 14 20 20 H 1.48497 * 109.47170 * 210.00208 * 18 16 14 21 21 H 1.48504 * 109.47036 * 329.99840 * 18 16 14 22 22 C 1.47063 * 136.05729 * 180.02562 * 11 9 8 23 23 H 1.09005 * 109.46920 * 269.68818 * 1 2 3 24 24 H 1.08997 * 109.47216 * 29.68720 * 1 2 3 25 25 H 1.08996 * 109.47584 * 149.69231 * 1 2 3 26 26 H 1.09003 * 113.46609 * 321.93831 * 12 11 9 27 27 H 1.09003 * 113.46672 * 92.37252 * 12 11 9 28 28 H 1.09004 * 114.19202 * 87.72694 * 13 12 11 29 29 H 0.97004 * 119.99942 * 179.97438 * 17 16 14 30 30 H 1.09004 * 113.47040 * 267.62075 * 22 11 9 31 31 H 1.08999 * 113.46917 * 38.00315 * 22 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.3013 1.0820 0.0000 4 1 2.0019 2.0046 0.0031 5 7 3.6339 0.6552 -0.0061 6 6 3.6598 -0.6499 -0.0103 7 17 5.0841 -1.6422 -0.0179 8 6 2.3240 -1.1131 -0.0061 9 6 1.8857 -2.5202 -0.0075 10 8 1.7005 -3.0983 -1.0613 11 7 1.6903 -3.1664 1.1590 12 6 1.8079 -2.8334 2.5866 13 6 2.0734 -4.3180 2.8583 14 6 1.3962 -4.8539 4.0932 15 1 0.4290 -5.3282 4.0160 16 6 2.0113 -4.7387 5.3218 17 7 1.4200 -5.2060 6.3996 18 14 3.6845 -3.9188 5.4554 19 1 3.5052 -2.4629 5.6862 20 1 4.4367 -4.5112 6.5904 21 1 4.4415 -4.1308 4.1955 22 6 1.2722 -4.5168 1.5644 23 1 -0.3633 -0.0056 1.0277 24 1 -0.3633 0.8927 -0.5089 25 1 -0.3634 -0.8872 -0.5186 26 1 2.6601 -2.1929 2.8141 27 1 0.8785 -2.4711 3.0259 28 1 3.1221 -4.6054 2.7829 29 1 1.8530 -5.1252 7.2639 30 1 0.1984 -4.6079 1.7285 31 1 1.6688 -5.3046 0.9240 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000864068632.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:24:02 Heat of formation + Delta-G solvation = 69.190757 kcal Electronic energy + Delta-G solvation = -18259.228890 eV Core-core repulsion = 15183.716701 eV Total energy + Delta-G solvation = -3075.512190 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.067 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.58343 -39.39491 -37.10945 -36.83575 -32.83898 -32.65523 -31.51164 -29.50304 -27.60717 -25.40435 -25.08611 -22.16164 -22.03214 -19.87076 -18.54164 -17.51877 -17.16433 -16.31473 -15.58324 -15.32549 -15.13999 -14.84680 -14.14573 -13.66620 -13.31932 -13.11127 -12.84983 -12.68513 -12.32053 -12.01317 -11.78558 -11.76752 -11.71598 -10.94343 -10.83059 -10.71159 -9.99865 -9.87572 -9.55182 -9.42968 -9.20607 -8.81445 -8.67987 -8.05540 -6.21465 -4.24389 1.39915 1.41222 2.12323 2.76141 2.90267 3.21616 3.30663 3.34107 3.54278 4.30962 4.35885 4.65727 4.83747 5.01417 5.13315 5.21986 5.54907 5.57891 5.71528 5.81798 5.95774 6.12714 6.25831 6.32858 6.41702 6.55651 6.82074 7.14477 7.18874 7.54569 8.28373 8.36760 8.61519 8.81756 9.39634 10.90300 Molecular weight = 269.07amu Principal moments of inertia in cm(-1) A = 0.020013 B = 0.006590 C = 0.006062 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1398.732906 B = 4248.094927 C = 4618.191161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.139 3.861 3 N -0.450 5.450 4 H 0.447 0.553 5 N -0.280 5.280 6 C 0.160 3.840 7 Cl 0.021 6.979 8 C -0.253 4.253 9 C 0.614 3.386 10 O -0.549 6.549 11 N -0.632 5.632 12 C 0.088 3.912 13 C -0.013 4.013 14 C -0.510 4.510 15 H 0.081 0.919 16 C 0.079 3.921 17 N -0.893 5.893 18 Si 0.869 3.131 19 H -0.274 1.274 20 H -0.286 1.286 21 H -0.260 1.260 22 C 0.115 3.885 23 H 0.093 0.907 24 H 0.080 0.920 25 H 0.094 0.906 26 H 0.052 0.948 27 H 0.085 0.915 28 H 0.067 0.933 29 H 0.266 0.734 30 H 0.082 0.918 31 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.347 12.445 -10.177 16.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.007 3.993 3 N -0.159 5.159 4 H 0.293 0.707 5 N -0.106 5.106 6 C -0.032 4.032 7 Cl 0.048 6.952 8 C -0.268 4.268 9 C 0.401 3.599 10 O -0.427 6.427 11 N -0.365 5.365 12 C -0.035 4.035 13 C -0.032 4.032 14 C -0.548 4.548 15 H 0.099 0.901 16 C -0.125 4.125 17 N -0.529 5.529 18 Si 0.696 3.304 19 H -0.200 1.200 20 H -0.212 1.212 21 H -0.185 1.185 22 C -0.006 4.006 23 H 0.112 0.888 24 H 0.099 0.901 25 H 0.112 0.888 26 H 0.071 0.929 27 H 0.103 0.897 28 H 0.085 0.915 29 H 0.076 0.924 30 H 0.100 0.900 31 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 1.146 13.149 -10.722 17.005 hybrid contribution 0.509 0.358 0.303 0.692 sum 1.654 13.507 -10.419 17.138 Atomic orbital electron populations 1.20618 0.85676 1.04831 1.04598 1.21378 0.94856 0.85924 0.97113 1.45770 1.03023 1.08499 1.58649 0.70732 1.77104 0.96558 1.10709 1.26218 1.22556 0.88929 0.90425 1.01328 1.98421 1.35176 1.64854 1.96700 1.19838 0.91031 0.94725 1.21232 1.16565 0.77391 0.83598 0.82325 1.90753 1.53551 1.67815 1.30615 1.49847 1.64659 1.16347 1.05607 1.23780 1.00702 1.01967 0.77028 1.20866 0.97435 0.90972 0.93970 1.20756 1.06100 1.38868 0.89028 0.90108 1.24979 0.97332 0.94446 0.95704 1.69889 1.38762 1.45314 0.98955 0.86942 0.84938 0.80103 0.78404 1.19995 1.21152 1.18469 1.23145 1.00133 0.82479 0.94852 0.88820 0.90096 0.88762 0.92943 0.89656 0.91471 0.92365 0.89980 0.91789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.88 10.25 36.00 0.37 -0.51 16 2 C 0.14 1.74 7.29 -81.60 -0.60 1.15 16 3 N -0.45 -4.98 7.28 33.86 0.25 -4.73 16 4 H 0.45 2.96 8.96 -182.73 -1.64 1.32 16 5 N -0.28 -4.11 12.64 33.17 0.42 -3.69 16 6 C 0.16 2.63 7.89 -16.91 -0.13 2.49 16 7 Cl 0.02 0.33 29.19 -51.86 -1.51 -1.18 16 8 C -0.25 -4.19 5.70 -105.04 -0.60 -4.79 16 9 C 0.61 11.77 7.42 -12.54 -0.09 11.68 16 10 O -0.55 -12.01 17.88 5.27 0.09 -11.91 16 11 N -0.63 -12.13 3.69 -186.73 -0.69 -12.82 16 12 C 0.09 1.71 7.50 -8.66 -0.06 1.65 16 13 C -0.01 -0.28 2.98 -91.41 -0.27 -0.55 16 14 C -0.51 -12.97 9.38 -34.44 -0.32 -13.29 16 15 H 0.08 2.21 8.06 -52.49 -0.42 1.79 16 16 C 0.08 2.10 5.47 -17.82 -0.10 2.00 16 17 N -0.89 -25.47 13.96 55.43 0.77 -24.70 16 18 Si 0.87 20.10 27.42 -169.99 -4.66 15.44 16 19 H -0.27 -6.21 7.11 56.52 0.40 -5.81 16 20 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 21 H -0.26 -5.82 6.22 56.52 0.35 -5.47 16 22 C 0.12 2.25 8.19 -8.53 -0.07 2.18 16 23 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 24 H 0.08 0.45 8.14 -51.93 -0.42 0.03 16 25 H 0.09 0.97 7.96 -51.93 -0.41 0.55 16 26 H 0.05 1.01 8.14 -51.93 -0.42 0.59 16 27 H 0.09 1.60 8.10 -51.93 -0.42 1.18 16 28 H 0.07 1.50 6.50 -51.93 -0.34 1.17 16 29 H 0.27 7.16 8.31 -40.82 -0.34 6.82 16 30 H 0.08 1.53 8.10 -51.93 -0.42 1.11 16 31 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 LS Contribution 293.12 15.07 4.42 4.42 Total: -1.00 -31.71 293.12 -7.32 -39.03 By element: Atomic # 1 Polarization: 2.67 SS G_CDS: -4.53 Total: -1.86 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: -1.88 Total: 2.02 kcal Atomic # 7 Polarization: -46.69 SS G_CDS: 0.75 Total: -45.94 kcal Atomic # 8 Polarization: -12.01 SS G_CDS: 0.09 Total: -11.91 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -4.66 Total: 15.44 kcal Atomic # 17 Polarization: 0.33 SS G_CDS: -1.51 Total: -1.18 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -31.71 -7.32 -39.03 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000864068632.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.220 kcal (2) G-P(sol) polarization free energy of solvation -31.708 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.029 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.191 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds