Wall clock time and date at job start Mon Mar 30 2020 04:58:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46895 * 111.00318 * 2 1 4 4 C 1.50702 * 109.47120 * 293.95550 * 3 2 1 5 5 H 1.08003 * 119.99431 * 359.97438 * 4 3 2 6 6 C 1.37871 * 120.00393 * 180.02562 * 4 3 2 7 7 N 1.31517 * 119.99771 * 359.97438 * 6 4 3 8 8 Si 1.86799 * 120.00397 * 179.97438 * 6 4 3 9 9 H 1.48495 * 109.47302 * 89.99496 * 8 6 4 10 10 H 1.48495 * 109.47154 * 209.99999 * 8 6 4 11 11 H 1.48504 * 109.46645 * 329.99490 * 8 6 4 12 12 C 1.46904 * 110.99841 * 123.95253 * 2 1 3 13 13 C 1.50699 * 109.47250 * 66.04250 * 12 2 1 14 14 O 1.21283 * 119.99912 * 0.02562 * 13 12 2 15 15 C 1.46984 * 120.00221 * 180.02562 * 13 12 2 16 16 C 1.39944 * 120.18294 * 0.02562 * 15 13 12 17 17 C 1.37979 * 119.82395 * 179.97438 * 16 15 13 18 18 F 1.35099 * 119.90166 * 180.02562 * 17 16 15 19 19 C 1.38719 * 120.19548 * 359.73144 * 17 16 15 20 20 C 1.38202 * 120.37882 * 0.55517 * 19 17 16 21 21 C 1.38273 * 120.16993 * 359.43953 * 20 19 17 22 22 F 1.35102 * 120.10158 * 180.26043 * 21 20 19 23 23 H 1.09009 * 109.46970 * 296.05181 * 1 2 3 24 24 H 1.08998 * 109.46708 * 56.04280 * 1 2 3 25 25 H 1.08994 * 109.47491 * 176.05106 * 1 2 3 26 26 H 1.08999 * 109.47076 * 53.95164 * 3 2 1 27 27 H 1.09000 * 109.47220 * 173.95382 * 3 2 1 28 28 H 0.97006 * 119.99869 * 180.02562 * 7 6 4 29 29 H 1.09003 * 109.47231 * 306.04720 * 12 2 1 30 30 H 1.08992 * 109.47245 * 186.04641 * 12 2 1 31 31 H 1.08002 * 120.08661 * 359.96082 * 16 15 13 32 32 H 1.08007 * 119.80942 * 180.27016 * 19 17 16 33 33 H 1.08002 * 119.91866 * 179.72504 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6370 2.0471 -1.2984 5 1 1.0747 1.5111 -2.0487 6 6 2.0278 3.3490 -1.5290 7 7 2.7130 4.0014 -0.6155 8 14 1.5840 4.1864 -3.1387 9 1 0.2719 4.8672 -2.9973 10 1 2.6267 5.1870 -3.4801 11 1 1.5006 3.1703 -4.2186 12 6 1.9955 -0.7660 1.1376 13 6 1.6369 -2.2204 0.9730 14 8 1.0054 -2.5832 0.0032 15 6 2.0524 -3.1992 1.9877 16 6 2.7807 -2.7847 3.1085 17 6 3.1665 -3.7098 4.0568 18 9 3.8692 -3.3113 5.1396 19 6 2.8298 -5.0469 3.9046 20 6 2.1158 -5.4662 2.7980 21 6 1.7212 -4.5523 1.8384 22 9 1.0188 -4.9630 0.7598 23 1 -0.3633 0.4514 0.9233 24 1 -0.3633 0.5740 -0.8524 25 1 -0.3634 -1.0251 -0.0708 26 1 1.5612 1.9273 0.8309 27 1 3.0798 1.3443 0.1082 28 1 2.9876 4.9176 -0.7775 29 1 1.5611 -0.3872 2.0629 30 1 3.0797 -0.6611 1.1757 31 1 3.0402 -1.7435 3.2308 32 1 3.1312 -5.7650 4.6529 33 1 1.8615 -6.5097 2.6848 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000048013445.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:58:01 Heat of formation + Delta-G solvation = -87.331357 kcal Electronic energy + Delta-G solvation = -19784.160827 eV Core-core repulsion = 16253.604992 eV Total energy + Delta-G solvation = -3530.555835 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 269.097 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -49.22225 -49.08337 -39.89939 -38.28031 -35.94128 -32.60381 -32.18543 -30.30198 -28.43903 -26.99869 -24.92462 -23.95595 -22.74522 -20.86390 -19.74267 -17.98948 -17.49045 -17.39017 -16.35058 -16.20477 -15.72147 -15.59509 -15.01640 -14.79744 -14.70120 -14.43917 -14.39201 -13.79564 -13.50990 -13.31020 -12.83829 -12.48587 -12.18337 -11.89821 -11.76648 -11.47191 -11.07608 -10.85735 -10.74334 -10.55379 -10.01421 -9.64173 -9.51674 -9.09009 -8.91124 -8.45043 -7.30569 -6.04229 -4.05028 0.17705 0.62142 2.25527 3.19514 3.32807 3.38803 3.44293 3.64038 3.78139 3.95723 4.18198 4.42583 4.46978 4.70512 5.00605 5.07888 5.32182 5.36099 5.43982 5.54932 5.66229 5.66582 5.73822 5.78120 6.23544 6.33377 6.35601 6.82997 7.19084 7.26275 7.65638 7.78084 8.03054 8.14007 8.49349 9.02704 9.59299 11.06823 Molecular weight = 269.10amu Principal moments of inertia in cm(-1) A = 0.029838 B = 0.004070 C = 0.003661 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 938.176099 B = 6878.025525 C = 7646.531019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.528 5.528 3 C 0.192 3.808 4 C -0.507 4.507 5 H 0.065 0.935 6 C 0.055 3.945 7 N -0.900 5.900 8 Si 0.899 3.101 9 H -0.281 1.281 10 H -0.287 1.287 11 H -0.272 1.272 12 C 0.013 3.987 13 C 0.388 3.612 14 O -0.410 6.410 15 C -0.166 4.166 16 C -0.081 4.081 17 C 0.077 3.923 18 F -0.132 7.132 19 C -0.100 4.100 20 C -0.140 4.140 21 C 0.143 3.857 22 F -0.112 7.112 23 H 0.008 0.992 24 H 0.077 0.923 25 H 0.059 0.941 26 H -0.007 1.007 27 H 0.031 0.969 28 H 0.261 0.739 29 H 0.060 0.940 30 H 0.105 0.895 31 H 0.157 0.843 32 H 0.149 0.851 33 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.384 -17.694 11.558 21.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 N -0.252 5.252 3 C 0.067 3.933 4 C -0.545 4.545 5 H 0.083 0.917 6 C -0.146 4.146 7 N -0.540 5.540 8 Si 0.727 3.273 9 H -0.207 1.207 10 H -0.212 1.212 11 H -0.197 1.197 12 C -0.116 4.116 13 C 0.262 3.738 14 O -0.282 6.282 15 C -0.169 4.169 16 C -0.100 4.100 17 C 0.058 3.942 18 F -0.111 7.111 19 C -0.119 4.119 20 C -0.159 4.159 21 C 0.123 3.877 22 F -0.090 7.090 23 H 0.026 0.974 24 H 0.095 0.905 25 H 0.078 0.922 26 H 0.011 0.989 27 H 0.049 0.951 28 H 0.071 0.929 29 H 0.078 0.922 30 H 0.123 0.877 31 H 0.175 0.825 32 H 0.167 0.833 33 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.282 -17.923 10.610 20.830 hybrid contribution -0.299 0.965 0.129 1.018 sum -0.017 -16.958 10.739 20.072 Atomic orbital electron populations 1.22373 0.88143 1.00844 1.00374 1.61972 1.07756 1.17726 1.37796 1.19801 0.95409 0.81031 0.97030 1.21152 1.34831 0.96906 1.01636 0.91691 1.24977 0.95228 0.97291 0.97084 1.69955 1.38404 1.11460 1.34154 0.86475 0.77971 0.79191 0.83692 1.20721 1.21241 1.19691 1.22364 1.02430 0.91324 0.95523 1.22510 0.77328 0.90568 0.83381 1.90556 1.28435 1.81559 1.27605 1.20770 1.03621 0.93706 0.98755 1.21424 0.95815 1.01126 0.91598 1.17519 0.97545 0.93049 0.86088 1.91547 1.76207 1.91287 1.52040 1.21186 0.97790 0.94533 0.98403 1.20992 1.00733 1.00535 0.93625 1.17958 0.92992 0.91752 0.84962 1.91616 1.75062 1.90383 1.51946 0.97378 0.90457 0.92233 0.98875 0.95061 0.92910 0.92236 0.87712 0.82498 0.83343 0.83145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.65 9.03 60.07 0.54 1.19 16 2 N -0.53 -11.70 4.49 -245.83 -1.10 -12.81 16 3 C 0.19 4.96 4.72 -4.98 -0.02 4.93 16 4 C -0.51 -14.36 8.46 -34.44 -0.29 -14.65 16 5 H 0.06 1.85 7.12 -52.48 -0.37 1.48 16 6 C 0.06 1.57 5.46 -17.82 -0.10 1.48 16 7 N -0.90 -26.56 13.29 55.43 0.74 -25.82 16 8 Si 0.90 21.79 29.54 -169.99 -5.02 16.77 16 9 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 10 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 11 H -0.27 -6.54 7.11 56.52 0.40 -6.14 16 12 C 0.01 0.22 4.06 -4.97 -0.02 0.20 16 13 C 0.39 6.30 6.84 -30.77 -0.21 6.09 16 14 O -0.41 -8.00 13.30 5.56 0.07 -7.92 16 15 C -0.17 -2.10 5.87 -105.02 -0.62 -2.72 16 16 C -0.08 -0.83 9.44 -39.04 -0.37 -1.20 16 17 C 0.08 0.72 7.29 -39.50 -0.29 0.43 16 18 F -0.13 -1.31 17.26 2.25 0.04 -1.27 16 19 C -0.10 -0.75 10.01 -39.42 -0.39 -1.15 16 20 C -0.14 -1.17 10.01 -39.58 -0.40 -1.56 16 21 C 0.14 1.71 7.29 -38.87 -0.28 1.43 16 22 F -0.11 -1.60 15.55 2.25 0.04 -1.56 16 23 H 0.01 0.15 8.14 -51.92 -0.42 -0.27 16 24 H 0.08 1.71 6.76 -51.93 -0.35 1.36 16 25 H 0.06 1.18 5.88 -51.93 -0.31 0.87 16 26 H -0.01 -0.18 8.12 -51.93 -0.42 -0.60 16 27 H 0.03 0.84 7.93 -51.93 -0.41 0.43 16 28 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 29 H 0.06 0.91 8.07 -51.93 -0.42 0.49 16 30 H 0.10 1.64 7.88 -51.93 -0.41 1.23 16 31 H 0.16 1.43 7.05 -52.49 -0.37 1.06 16 32 H 0.15 0.69 8.06 -52.48 -0.42 0.27 16 33 H 0.15 0.85 8.06 -52.49 -0.42 0.43 16 LS Contribution 294.60 15.07 4.44 4.44 Total: -1.00 -32.20 294.60 -6.71 -38.92 By element: Atomic # 1 Polarization: -1.73 SS G_CDS: -3.47 Total: -5.20 kcal Atomic # 6 Polarization: -3.10 SS G_CDS: -2.45 Total: -5.55 kcal Atomic # 7 Polarization: -38.26 SS G_CDS: -0.37 Total: -38.63 kcal Atomic # 8 Polarization: -8.00 SS G_CDS: 0.07 Total: -7.92 kcal Atomic # 9 Polarization: -2.90 SS G_CDS: 0.07 Total: -2.83 kcal Atomic # 14 Polarization: 21.79 SS G_CDS: -5.02 Total: 16.77 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -32.20 -6.71 -38.92 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000048013445.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.416 kcal (2) G-P(sol) polarization free energy of solvation -32.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.617 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.714 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds