Wall clock time and date at job start Mon Mar 30 2020 04:58:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46907 * 1 3 3 C 1.46896 * 110.99805 * 2 1 4 4 C 1.50706 * 109.47293 * 293.95211 * 3 2 1 5 5 H 1.08003 * 119.99552 * 0.02562 * 4 3 2 6 6 C 1.37871 * 119.99706 * 180.02562 * 4 3 2 7 7 N 1.31513 * 120.00377 * 359.97438 * 6 4 3 8 8 Si 1.86803 * 119.99837 * 180.02562 * 6 4 3 9 9 H 1.48503 * 109.47221 * 59.99355 * 8 6 4 10 10 H 1.48496 * 109.47705 * 179.97438 * 8 6 4 11 11 H 1.48503 * 109.47030 * 300.00009 * 8 6 4 12 12 C 1.46899 * 110.99769 * 123.95279 * 2 1 3 13 13 C 1.50703 * 109.47107 * 66.04798 * 12 2 1 14 14 O 1.21273 * 119.99963 * 359.97438 * 13 12 2 15 15 C 1.47018 * 120.00053 * 180.02562 * 13 12 2 16 16 C 1.39937 * 120.13564 * 180.02562 * 15 13 12 17 17 C 1.37764 * 119.89528 * 179.97438 * 16 15 13 18 18 C 1.38662 * 120.17524 * 359.97438 * 17 16 15 19 19 F 1.35108 * 119.86343 * 179.97438 * 18 17 16 20 20 C 1.38895 * 120.27849 * 359.97438 * 18 17 16 21 21 F 1.35097 * 119.95321 * 179.97438 * 20 18 17 22 22 C 1.37968 * 120.09693 * 359.75127 * 20 18 17 23 23 H 1.08995 * 109.47407 * 296.04618 * 1 2 3 24 24 H 1.09006 * 109.46770 * 56.04664 * 1 2 3 25 25 H 1.09003 * 109.46848 * 176.04346 * 1 2 3 26 26 H 1.09006 * 109.47466 * 53.95276 * 3 2 1 27 27 H 1.09000 * 109.46995 * 173.95474 * 3 2 1 28 28 H 0.97004 * 120.00259 * 179.97438 * 7 6 4 29 29 H 1.09002 * 109.47043 * 186.04778 * 12 2 1 30 30 H 1.09001 * 109.47354 * 306.04839 * 12 2 1 31 31 H 1.07995 * 120.05396 * 359.97438 * 16 15 13 32 32 H 1.08004 * 119.91015 * 179.97438 * 17 16 15 33 33 H 1.08004 * 120.08925 * 180.25309 * 22 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6370 2.0471 -1.2985 5 1 1.0740 1.5114 -2.0485 6 6 2.0277 3.3491 -1.5288 7 7 2.7128 4.0015 -0.6153 8 14 1.5827 4.1870 -3.1381 9 1 0.1054 4.2243 -3.2848 10 1 2.1149 5.5733 -3.1382 11 1 2.1735 3.4294 -4.2705 12 6 1.9955 -0.7660 1.1376 13 6 1.6369 -2.2204 0.9729 14 8 1.0048 -2.5831 0.0035 15 6 2.0526 -3.1995 1.9878 16 6 1.7217 -4.5508 1.8374 17 6 2.1141 -5.4642 2.7912 18 6 2.8364 -5.0479 3.8992 19 9 3.2176 -5.9489 4.8311 20 6 3.1697 -3.7086 4.0553 21 9 3.8732 -3.3102 5.1376 22 6 2.7874 -2.7852 3.1042 23 1 -0.3634 0.4512 0.9232 24 1 -0.3633 0.5740 -0.8525 25 1 -0.3633 -1.0253 -0.0709 26 1 1.5611 1.9274 0.8309 27 1 3.0797 1.3444 0.1082 28 1 2.9880 4.9174 -0.7776 29 1 3.0797 -0.6611 1.1757 30 1 1.5611 -0.3872 2.0628 31 1 1.1595 -4.8773 0.9750 32 1 1.8585 -6.5071 2.6756 33 1 3.0501 -1.7444 3.2236 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000050132643.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:58:05 Heat of formation + Delta-G solvation = -88.838369 kcal Electronic energy + Delta-G solvation = -19540.365095 eV Core-core repulsion = 16009.743912 eV Total energy + Delta-G solvation = -3530.621184 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 269.097 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -49.79520 -48.86056 -40.13623 -38.20634 -35.97469 -32.59224 -31.86083 -30.85156 -28.37116 -27.00521 -24.78544 -23.90995 -23.01415 -20.86162 -19.80150 -18.33261 -17.37648 -17.28638 -16.63982 -16.39231 -16.01867 -15.28971 -15.17184 -14.79775 -14.68353 -14.60764 -14.41358 -13.96296 -13.56153 -13.32663 -12.81748 -12.49515 -12.31415 -11.91363 -11.75686 -11.48833 -11.09847 -10.88665 -10.77048 -10.56833 -10.04464 -9.57088 -9.51177 -9.14213 -9.07745 -8.46061 -7.33388 -6.05578 -4.06708 0.11956 0.62915 2.16101 3.22534 3.33565 3.35430 3.37207 3.40754 3.79454 3.96861 4.14821 4.41795 4.52204 4.69593 4.98022 5.11608 5.30687 5.33936 5.41851 5.44523 5.62141 5.64523 5.75033 5.90725 6.20405 6.30488 6.31134 6.79862 7.17059 7.24325 7.61426 7.75549 8.01025 8.11720 8.47230 9.00605 9.57637 11.05385 Molecular weight = 269.10amu Principal moments of inertia in cm(-1) A = 0.038356 B = 0.003586 C = 0.003344 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 729.822663 B = 7806.578356 C = 8371.476197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.528 5.528 3 C 0.192 3.808 4 C -0.508 4.508 5 H 0.064 0.936 6 C 0.056 3.944 7 N -0.900 5.900 8 Si 0.900 3.100 9 H -0.277 1.277 10 H -0.288 1.288 11 H -0.276 1.276 12 C 0.008 3.992 13 C 0.395 3.605 14 O -0.420 6.420 15 C -0.139 4.139 16 C -0.046 4.046 17 C -0.137 4.137 18 C 0.089 3.911 19 F -0.126 7.126 20 C 0.058 3.942 21 F -0.125 7.125 22 C -0.081 4.081 23 H 0.008 0.992 24 H 0.076 0.924 25 H 0.059 0.941 26 H -0.007 1.007 27 H 0.031 0.969 28 H 0.262 0.738 29 H 0.105 0.895 30 H 0.060 0.940 31 H 0.152 0.848 32 H 0.152 0.848 33 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.556 -17.166 9.742 19.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 N -0.252 5.252 3 C 0.067 3.933 4 C -0.547 4.547 5 H 0.083 0.917 6 C -0.146 4.146 7 N -0.539 5.539 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.214 1.214 11 H -0.201 1.201 12 C -0.121 4.121 13 C 0.269 3.731 14 O -0.293 6.293 15 C -0.141 4.141 16 C -0.064 4.064 17 C -0.156 4.156 18 C 0.069 3.931 19 F -0.104 7.104 20 C 0.038 3.962 21 F -0.104 7.104 22 C -0.100 4.100 23 H 0.026 0.974 24 H 0.095 0.905 25 H 0.078 0.922 26 H 0.011 0.989 27 H 0.049 0.951 28 H 0.072 0.928 29 H 0.123 0.877 30 H 0.078 0.922 31 H 0.170 0.830 32 H 0.169 0.831 33 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -0.608 -17.407 8.894 19.557 hybrid contribution -0.077 0.879 0.519 1.024 sum -0.685 -16.528 9.413 19.033 Atomic orbital electron populations 1.22374 0.88169 1.00808 1.00398 1.61990 1.07726 1.17752 1.37768 1.19799 0.95409 0.81048 0.97012 1.21109 1.34980 0.96930 1.01653 0.91741 1.24977 0.95233 0.97279 0.97066 1.69940 1.38306 1.11566 1.34122 0.86532 0.78743 0.78266 0.83716 1.20246 1.21357 1.20102 1.22414 1.02493 0.91620 0.95557 1.22557 0.76731 0.90510 0.83276 1.90499 1.29068 1.81690 1.28008 1.20704 1.01067 0.95450 0.96865 1.21396 0.95725 0.91181 0.98141 1.21064 0.99679 1.01939 0.92926 1.18001 1.00244 0.85382 0.89469 1.91549 1.89148 1.66157 1.63578 1.17526 0.99630 0.91532 0.87544 1.91560 1.76065 1.90995 1.51779 1.21485 0.96034 1.00661 0.91782 0.97378 0.90485 0.92223 0.98881 0.95074 0.92828 0.87689 0.92199 0.82997 0.83078 0.82370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.62 9.03 60.07 0.54 1.16 16 2 N -0.53 -11.28 4.49 -245.81 -1.10 -12.38 16 3 C 0.19 4.87 4.72 -4.98 -0.02 4.84 16 4 C -0.51 -14.18 8.46 -34.44 -0.29 -14.47 16 5 H 0.06 1.80 7.12 -52.48 -0.37 1.43 16 6 C 0.06 1.57 5.46 -17.82 -0.10 1.47 16 7 N -0.90 -26.32 13.29 55.43 0.74 -25.58 16 8 Si 0.90 21.54 29.54 -169.99 -5.02 16.52 16 9 H -0.28 -6.52 7.11 56.52 0.40 -6.11 16 10 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 11 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 12 C 0.01 0.13 4.05 -4.98 -0.02 0.11 16 13 C 0.39 5.76 6.84 -30.75 -0.21 5.55 16 14 O -0.42 -7.29 14.30 5.56 0.08 -7.21 16 15 C -0.14 -1.57 5.87 -105.07 -0.62 -2.18 16 16 C -0.05 -0.44 9.59 -39.12 -0.38 -0.82 16 17 C -0.14 -1.14 10.00 -39.60 -0.40 -1.53 16 18 C 0.09 0.89 7.31 -39.18 -0.29 0.60 16 19 F -0.13 -1.33 17.17 2.25 0.04 -1.30 16 20 C 0.06 0.61 7.29 -39.44 -0.29 0.33 16 21 F -0.13 -1.45 17.17 2.25 0.04 -1.42 16 22 C -0.08 -0.82 9.44 -39.05 -0.37 -1.19 16 23 H 0.01 0.15 8.14 -51.93 -0.42 -0.27 16 24 H 0.08 1.66 6.76 -51.93 -0.35 1.30 16 25 H 0.06 1.11 5.88 -51.93 -0.31 0.80 16 26 H -0.01 -0.18 8.12 -51.93 -0.42 -0.60 16 27 H 0.03 0.83 7.93 -51.93 -0.41 0.41 16 28 H 0.26 7.27 8.31 -40.82 -0.34 6.94 16 29 H 0.11 1.57 7.87 -51.93 -0.41 1.16 16 30 H 0.06 0.88 8.07 -51.93 -0.42 0.46 16 31 H 0.15 1.34 7.64 -52.49 -0.40 0.93 16 32 H 0.15 0.85 8.06 -52.48 -0.42 0.43 16 33 H 0.16 1.41 7.05 -52.48 -0.37 1.04 16 LS Contribution 296.31 15.07 4.47 4.47 Total: -1.00 -31.02 296.31 -6.64 -37.67 By element: Atomic # 1 Polarization: -1.18 SS G_CDS: -3.44 Total: -4.62 kcal Atomic # 6 Polarization: -3.71 SS G_CDS: -2.43 Total: -6.14 kcal Atomic # 7 Polarization: -37.60 SS G_CDS: -0.37 Total: -37.97 kcal Atomic # 8 Polarization: -7.29 SS G_CDS: 0.08 Total: -7.21 kcal Atomic # 9 Polarization: -2.79 SS G_CDS: 0.08 Total: -2.71 kcal Atomic # 14 Polarization: 21.54 SS G_CDS: -5.02 Total: 16.52 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -31.02 -6.64 -37.67 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000050132643.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.173 kcal (2) G-P(sol) polarization free energy of solvation -31.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.198 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds