Wall clock time and date at job start Mon Mar 30 2020 05:02:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46495 * 109.47243 * 257.06968 * 3 2 1 5 5 C 1.36832 * 120.00106 * 262.95378 * 4 3 2 6 6 H 1.07996 * 120.00312 * 202.53501 * 5 4 3 7 7 C 1.38909 * 119.99550 * 22.25377 * 5 4 3 8 8 N 1.31475 * 120.00379 * 7.85469 * 7 5 4 9 9 Si 1.86802 * 119.99617 * 187.85190 * 7 5 4 10 10 H 1.48497 * 109.46871 * 90.00223 * 9 7 5 11 11 H 1.48500 * 109.47116 * 210.00121 * 9 7 5 12 12 H 1.48497 * 109.47535 * 330.00243 * 9 7 5 13 13 C 1.37870 * 120.00119 * 82.95707 * 4 3 2 14 14 N 1.32726 * 120.90627 * 273.71219 * 13 4 3 15 15 C 1.32288 * 121.46557 * 179.97438 * 14 13 4 16 16 N 1.31224 * 122.99822 * 359.97438 * 15 14 13 17 17 C 1.34124 * 120.50840 * 0.02562 * 16 15 14 18 18 C 1.40214 * 121.84266 * 179.97438 * 17 16 15 19 19 C 1.36167 * 119.82470 * 179.97438 * 18 17 16 20 20 C 1.39863 * 120.96294 * 0.02562 * 19 18 17 21 21 N 1.39696 * 119.70493 * 180.02562 * 20 19 18 22 22 C 1.38054 * 120.59203 * 359.97438 * 20 19 18 23 23 C 1.39826 * 119.34494 * 359.74332 * 22 20 19 24 24 H 1.09003 * 109.47187 * 137.06568 * 3 2 1 25 25 H 1.09007 * 109.46899 * 17.06951 * 3 2 1 26 26 H 0.96995 * 120.00184 * 179.97438 * 8 7 5 27 27 H 1.07995 * 118.50199 * 179.97438 * 15 14 13 28 28 H 1.07995 * 120.08884 * 0.02562 * 18 17 16 29 29 H 1.08005 * 119.51784 * 180.02562 * 19 18 17 30 30 H 0.97003 * 120.00042 * 359.97438 * 21 20 19 31 31 H 0.97000 * 120.00499 * 179.97438 * 21 20 19 32 32 H 1.07996 * 120.32761 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0962 0.3099 1.3461 5 6 3.4607 1.5898 1.6644 6 1 4.1396 1.7698 2.4849 7 6 2.9622 2.6573 0.9285 8 7 2.0245 2.4550 0.0294 9 14 3.6241 4.3802 1.2164 10 1 4.7809 4.6226 0.3174 11 1 2.5584 5.3741 0.9308 12 1 4.0594 4.5136 2.6299 13 6 3.1884 -0.6886 2.2923 14 7 2.1451 -1.0117 3.0464 15 6 2.2211 -1.9681 3.9572 16 7 3.3150 -2.6580 4.1794 17 6 4.4291 -2.4140 3.4736 18 6 5.6132 -3.1336 3.6882 19 6 6.7205 -2.8520 2.9475 20 6 6.6974 -1.8511 1.9708 21 7 7.8486 -1.5844 1.2256 22 6 5.5470 -1.1251 1.7358 23 6 4.3972 -1.4027 2.4816 24 1 2.9710 0.7532 -0.7000 25 1 2.9717 -0.9817 -0.3017 26 1 1.6762 3.2005 -0.4842 27 1 1.3428 -2.1914 4.5446 28 1 5.6467 -3.9097 4.4384 29 1 7.6298 -3.4097 3.1166 30 1 8.6592 -2.0922 1.3869 31 1 7.8373 -0.8915 0.5469 32 1 5.5338 -0.3535 0.9803 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000081589239.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:02:48 Heat of formation + Delta-G solvation = 129.008651 kcal Electronic energy + Delta-G solvation = -19802.766989 eV Core-core repulsion = 16764.574298 eV Total energy + Delta-G solvation = -3038.192690 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 269.097 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -40.66824 -37.81003 -36.76058 -34.52221 -33.90374 -32.69415 -30.93267 -30.62406 -28.16009 -27.17668 -24.87834 -23.20888 -23.08053 -21.05467 -18.39339 -17.72552 -17.64968 -17.15377 -16.30554 -15.70479 -14.81125 -14.66535 -14.37683 -13.96259 -13.73781 -13.56511 -13.45041 -12.85079 -12.49836 -12.44965 -11.82792 -11.40355 -11.31122 -11.16031 -11.04984 -10.62779 -10.45084 -10.31720 -10.21581 -10.14080 -9.62239 -9.09096 -8.61833 -8.54316 -7.55116 -7.03175 -6.15209 -3.72609 0.76975 1.33709 2.42044 3.21742 3.29970 3.32257 3.47074 3.86597 3.95624 4.28236 4.41854 4.63552 4.67912 4.73971 4.94243 5.05073 5.15828 5.29042 5.57634 5.58855 5.73001 5.95810 6.14295 6.21954 6.35485 6.40894 6.49092 6.83396 6.93159 7.00847 7.48889 7.53722 7.78232 7.84373 8.01637 8.73003 8.89100 9.15821 9.39170 9.73292 10.90771 Molecular weight = 269.10amu Principal moments of inertia in cm(-1) A = 0.016612 B = 0.007698 C = 0.006272 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1685.073685 B = 3636.504762 C = 4463.121046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.495 5.495 2 C 0.250 3.750 3 C 0.266 3.734 4 N -0.528 5.528 5 C -0.273 4.273 6 H 0.084 0.916 7 C 0.020 3.980 8 N -0.899 5.899 9 Si 0.923 3.077 10 H -0.281 1.281 11 H -0.287 1.287 12 H -0.277 1.277 13 C 0.480 3.520 14 N -0.540 5.540 15 C 0.290 3.710 16 N -0.526 5.526 17 C 0.116 3.884 18 C -0.072 4.072 19 C -0.138 4.138 20 C 0.188 3.812 21 N -0.879 5.879 22 C -0.138 4.138 23 C -0.115 4.115 24 H 0.135 0.865 25 H 0.056 0.944 26 H 0.266 0.734 27 H 0.180 0.820 28 H 0.133 0.867 29 H 0.124 0.876 30 H 0.394 0.606 31 H 0.400 0.600 32 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.026 -8.309 1.302 15.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.176 5.176 2 C -0.069 4.069 3 C 0.138 3.862 4 N -0.247 5.247 5 C -0.400 4.400 6 H 0.102 0.898 7 C -0.181 4.181 8 N -0.541 5.541 9 Si 0.752 3.248 10 H -0.207 1.207 11 H -0.213 1.213 12 H -0.202 1.202 13 C 0.230 3.770 14 N -0.258 5.258 15 C -0.002 4.002 16 N -0.241 5.241 17 C -0.012 4.012 18 C -0.091 4.091 19 C -0.162 4.162 20 C 0.084 3.916 21 N -0.419 5.419 22 C -0.165 4.165 23 C -0.124 4.124 24 H 0.152 0.848 25 H 0.074 0.926 26 H 0.077 0.923 27 H 0.197 0.803 28 H 0.151 0.849 29 H 0.142 0.858 30 H 0.221 0.779 31 H 0.229 0.771 32 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 10.466 -8.490 1.853 13.604 hybrid contribution 1.416 1.398 -0.306 2.013 sum 11.882 -7.092 1.546 13.924 Atomic orbital electron populations 1.80802 1.14228 1.13217 1.09351 1.29997 0.96027 0.89197 0.91704 1.18496 0.80780 0.99879 0.87052 1.41319 1.73159 1.04996 1.05251 1.19182 1.23219 0.80073 1.17553 0.89848 1.25112 0.95862 0.98768 0.98310 1.69739 1.27152 1.31695 1.25499 0.85971 0.77957 0.82621 0.78296 1.20747 1.21337 1.20187 1.19084 0.86344 0.85531 0.86043 1.68760 1.34065 1.16135 1.06804 1.24533 0.95065 0.87921 0.92637 1.68621 0.99751 1.28689 1.27028 1.18800 0.93427 0.95261 0.93751 1.20406 0.90455 0.98992 0.99292 1.20472 0.99038 0.99100 0.97561 1.17759 0.87666 0.94195 0.91940 1.42403 1.11330 1.44517 1.43639 1.20583 0.90322 1.02264 1.03349 1.19698 0.96583 0.97823 0.98302 0.84775 0.92579 0.92333 0.80300 0.84912 0.85769 0.77882 0.77121 0.83805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 21. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -13.04 18.54 42.15 0.78 -12.26 16 2 C 0.25 6.10 13.67 -20.76 -0.28 5.82 16 3 C 0.27 5.67 5.38 -6.83 -0.04 5.64 16 4 N -0.53 -11.99 1.86 -117.63 -0.22 -12.21 16 5 C -0.27 -6.64 9.66 -15.07 -0.15 -6.79 16 6 H 0.08 2.04 7.84 -52.49 -0.41 1.63 16 7 C 0.02 0.49 5.16 -17.46 -0.09 0.40 16 8 N -0.90 -23.24 8.99 55.49 0.50 -22.74 16 9 Si 0.92 19.90 29.56 -169.99 -5.02 14.88 16 10 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 11 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 12 H -0.28 -6.01 7.11 56.52 0.40 -5.60 16 13 C 0.48 10.44 6.09 -154.86 -0.94 9.50 16 14 N -0.54 -12.10 10.43 -13.51 -0.14 -12.24 16 15 C 0.29 5.54 12.22 -92.21 -1.13 4.42 16 16 N -0.53 -9.73 10.44 -12.62 -0.13 -9.87 16 17 C 0.12 2.06 6.62 -84.80 -0.56 1.50 16 18 C -0.07 -1.01 9.99 -39.58 -0.40 -1.40 16 19 C -0.14 -1.64 9.78 -39.72 -0.39 -2.03 16 20 C 0.19 2.41 6.74 -83.73 -0.56 1.84 16 21 N -0.88 -8.00 9.08 32.44 0.29 -7.71 16 22 C -0.14 -2.21 9.45 -39.06 -0.37 -2.58 16 23 C -0.12 -2.16 5.75 -106.67 -0.61 -2.77 16 24 H 0.13 2.90 6.27 -51.93 -0.33 2.57 16 25 H 0.06 1.01 8.10 -51.92 -0.42 0.59 16 26 H 0.27 6.82 8.31 -40.82 -0.34 6.48 16 27 H 0.18 2.84 8.06 -52.49 -0.42 2.41 16 28 H 0.13 1.58 8.06 -52.49 -0.42 1.16 16 29 H 0.12 1.06 8.06 -52.48 -0.42 0.64 16 30 H 0.39 2.58 8.84 -40.82 -0.36 2.22 16 31 H 0.40 3.30 8.83 -40.82 -0.36 2.94 16 32 H 0.14 2.33 7.65 -52.49 -0.40 1.92 16 LS Contribution 290.75 15.07 4.38 4.38 Total: -1.00 -31.00 290.75 -7.76 -38.76 By element: Atomic # 1 Polarization: 8.14 SS G_CDS: -2.68 Total: 5.46 kcal Atomic # 6 Polarization: 19.06 SS G_CDS: -5.52 Total: 13.54 kcal Atomic # 7 Polarization: -78.10 SS G_CDS: 1.08 Total: -77.02 kcal Atomic # 14 Polarization: 19.90 SS G_CDS: -5.02 Total: 14.88 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -31.00 -7.76 -38.76 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000081589239.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 167.770 kcal (2) G-P(sol) polarization free energy of solvation -30.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 136.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.762 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.761 kcal (6) G-S(sol) free energy of system = (1) + (5) 129.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds