Wall clock time and date at job start Mon Mar 30 2020 05:10:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.35376 * 126.13738 * 2 1 4 4 Cl 1.73602 * 126.04279 * 359.97438 * 3 2 1 5 5 C 1.39925 * 107.90667 * 180.13178 * 3 2 1 6 6 C 1.50702 * 125.89075 * 179.88240 * 5 3 2 7 7 N 1.46498 * 109.47588 * 269.71647 * 6 5 3 8 8 C 1.36937 * 119.99808 * 89.99736 * 7 6 5 9 9 H 1.08000 * 120.00212 * 218.52818 * 8 7 6 10 10 C 1.38812 * 119.99875 * 38.80380 * 8 7 6 11 11 N 1.31615 * 120.00167 * 19.00638 * 10 8 7 12 12 Si 1.86806 * 120.00116 * 199.00465 * 10 8 7 13 13 H 1.48502 * 109.46869 * 59.99722 * 12 10 8 14 14 H 1.48491 * 109.47442 * 179.97438 * 12 10 8 15 15 H 1.48497 * 109.46774 * 300.00370 * 12 10 8 16 16 C 1.46499 * 120.00097 * 270.00433 * 7 6 5 17 17 C 1.53003 * 117.49749 * 194.13220 * 16 7 6 18 18 C 1.52996 * 117.49910 * 125.47118 * 16 7 6 19 19 N 1.30849 * 108.21695 * 359.62389 * 5 3 2 20 20 N 1.35042 * 126.13394 * 179.71625 * 2 1 3 21 21 C 1.46501 * 126.04233 * 359.97438 * 20 2 1 22 22 H 1.08990 * 109.47512 * 270.28056 * 1 2 3 23 23 H 1.08997 * 109.46493 * 30.28409 * 1 2 3 24 24 H 1.08998 * 109.46905 * 150.27657 * 1 2 3 25 25 H 1.09002 * 109.46964 * 149.71650 * 6 5 3 26 26 H 1.09001 * 109.47133 * 29.72291 * 6 5 3 27 27 H 0.96998 * 120.00214 * 174.94048 * 11 10 8 28 28 H 1.09006 * 115.54946 * 339.79738 * 16 7 6 29 29 H 1.08997 * 117.49757 * 0.02562 * 17 16 7 30 30 H 1.08999 * 117.49567 * 145.01860 * 17 16 7 31 31 H 1.09001 * 117.49664 * 214.97578 * 18 16 7 32 32 H 1.08992 * 117.49850 * 359.97438 * 18 16 7 33 33 H 1.09000 * 109.46872 * 270.00015 * 21 20 2 34 34 H 1.08997 * 109.46922 * 29.99732 * 21 20 2 35 35 H 1.08992 * 109.47579 * 149.99678 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3054 1.0933 0.0000 4 17 1.7741 2.7460 -0.0006 5 6 3.6344 0.6556 -0.0031 6 6 4.8555 1.5388 -0.0066 7 7 5.2518 1.8187 -1.3889 8 6 4.7419 2.9104 -2.0397 9 1 4.4817 2.8427 -3.0857 10 6 4.5648 4.1056 -1.3563 11 7 5.2084 4.3204 -0.2285 12 14 3.4131 5.4091 -2.0373 13 1 2.0413 4.8504 -2.1445 14 1 3.3995 6.5822 -1.1270 15 1 3.8823 5.8305 -3.3817 16 6 6.1934 0.9306 -2.0751 17 6 6.8233 1.4370 -3.3743 18 6 5.7571 0.3394 -3.4171 19 7 3.6341 -0.6529 0.0033 20 7 2.3034 -1.0906 0.0054 21 6 1.8549 -2.4853 0.0128 22 1 -0.3634 0.0050 1.0275 23 1 -0.3632 0.8874 -0.5182 24 1 -0.3633 -0.8925 -0.5095 25 1 5.6713 1.0329 0.5099 26 1 4.6281 2.4752 0.5029 27 1 5.1423 5.1826 0.2110 28 1 6.8092 0.3071 -1.4268 29 1 6.5374 2.4310 -3.7182 30 1 7.8533 1.1462 -3.5809 31 1 6.0861 -0.6728 -3.6519 32 1 4.7693 0.6109 -3.7892 33 1 1.7441 -2.8258 1.0423 34 1 0.8963 -2.5614 -0.5002 35 1 2.5907 -3.1063 -0.4980 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000421325472.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:10:59 Heat of formation + Delta-G solvation = 119.701568 kcal Electronic energy + Delta-G solvation = -19093.134548 eV Core-core repulsion = 16155.645766 eV Total energy + Delta-G solvation = -2937.488782 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 269.099 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -40.68854 -36.91787 -35.53507 -33.94218 -32.71571 -31.45428 -30.42361 -27.21877 -26.50564 -24.95345 -23.32126 -21.26837 -20.06385 -19.59716 -19.01410 -16.48467 -16.03474 -15.38684 -15.25948 -14.32703 -14.19179 -13.90176 -13.37888 -13.22082 -12.98189 -12.65255 -12.31224 -12.19914 -11.96818 -11.62460 -11.23530 -10.96549 -10.68942 -10.63438 -10.50777 -10.35433 -10.21649 -9.96514 -9.65117 -9.45071 -9.23893 -8.54023 -8.34336 -7.60950 -6.42789 -5.77689 -3.32745 2.24082 2.64361 3.27133 3.40126 3.45387 3.50040 3.59135 4.51957 4.84238 4.92028 5.06912 5.16838 5.24832 5.40163 5.43783 5.47095 5.58633 5.75887 5.91757 6.00980 6.07987 6.21292 6.33467 6.40005 6.57323 6.70310 6.85144 7.07114 7.17106 7.26649 7.37536 7.59936 7.89801 8.31965 8.58763 9.20829 9.83147 10.39994 11.26111 Molecular weight = 269.10amu Principal moments of inertia in cm(-1) A = 0.016225 B = 0.009943 C = 0.007020 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1725.287554 B = 2815.430880 C = 3987.487456 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.069 3.931 3 C -0.158 4.158 4 Cl -0.037 7.037 5 C 0.104 3.896 6 C 0.214 3.786 7 N -0.534 5.534 8 C -0.259 4.259 9 H 0.057 0.943 10 C 0.038 3.962 11 N -0.885 5.885 12 Si 0.882 3.118 13 H -0.272 1.272 14 H -0.290 1.290 15 H -0.283 1.283 16 C 0.133 3.867 17 C -0.194 4.194 18 C -0.225 4.225 19 N -0.296 5.296 20 N -0.384 5.384 21 C 0.111 3.889 22 H 0.076 0.924 23 H 0.084 0.916 24 H 0.066 0.934 25 H 0.044 0.956 26 H 0.125 0.875 27 H 0.258 0.742 28 H 0.088 0.912 29 H 0.099 0.901 30 H 0.073 0.927 31 H 0.069 0.931 32 H 0.081 0.919 33 H 0.067 0.933 34 H 0.079 0.921 35 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.813 -9.570 1.622 12.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.058 4.058 3 C -0.197 4.197 4 Cl -0.009 7.009 5 C -0.066 4.066 6 C 0.085 3.915 7 N -0.249 5.249 8 C -0.388 4.388 9 H 0.075 0.925 10 C -0.163 4.163 11 N -0.526 5.526 12 Si 0.711 3.289 13 H -0.198 1.198 14 H -0.216 1.216 15 H -0.209 1.209 16 C 0.024 3.976 17 C -0.233 4.233 18 C -0.266 4.266 19 N -0.118 5.118 20 N -0.168 5.168 21 C -0.031 4.031 22 H 0.095 0.905 23 H 0.103 0.897 24 H 0.085 0.915 25 H 0.062 0.938 26 H 0.142 0.858 27 H 0.068 0.932 28 H 0.106 0.894 29 H 0.117 0.883 30 H 0.091 0.909 31 H 0.088 0.912 32 H 0.099 0.901 33 H 0.086 0.914 34 H 0.097 0.903 35 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -7.237 -10.473 1.817 12.859 hybrid contribution -1.286 1.383 -0.597 1.980 sum -8.523 -9.091 1.221 12.521 Atomic orbital electron populations 1.20380 0.87607 1.03528 1.02932 1.20506 0.94085 0.87125 1.04111 1.20441 0.93164 0.86304 1.19749 1.98311 1.89744 1.15331 1.97509 1.24152 0.97126 0.90902 0.94374 1.19698 0.87494 0.96678 0.87642 1.43185 1.45625 1.25340 1.10782 1.18740 1.37015 0.87824 0.95233 0.92502 1.25012 0.97715 0.96537 0.97010 1.69786 1.41244 1.22828 1.18780 0.86678 0.82607 0.81198 0.78410 1.19773 1.21590 1.20889 1.21092 0.94141 0.95737 0.86646 1.23079 0.95669 0.99193 1.05371 1.23292 0.99105 0.96043 1.08180 1.77469 0.95111 1.12396 1.26797 1.48158 1.04467 1.04945 1.59186 1.21662 1.00526 0.78373 1.02576 0.90498 0.89732 0.91471 0.93810 0.85793 0.93185 0.89415 0.88258 0.90877 0.91206 0.90061 0.91399 0.90260 0.89620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.06 9.94 36.01 0.36 -0.70 16 2 C 0.07 1.20 6.94 -82.20 -0.57 0.63 16 3 C -0.16 -3.31 6.63 -39.97 -0.27 -3.58 16 4 Cl -0.04 -0.79 27.53 -51.86 -1.43 -2.22 16 5 C 0.10 2.35 6.80 -82.38 -0.56 1.79 16 6 C 0.21 5.18 5.75 -5.19 -0.03 5.15 16 7 N -0.53 -13.40 2.76 -167.02 -0.46 -13.86 16 8 C -0.26 -6.93 8.02 -15.06 -0.12 -7.05 16 9 H 0.06 1.58 7.24 -52.49 -0.38 1.20 16 10 C 0.04 1.03 4.67 -17.43 -0.08 0.95 16 11 N -0.88 -24.47 11.40 55.49 0.63 -23.84 16 12 Si 0.88 21.57 28.89 -169.99 -4.91 16.66 16 13 H -0.27 -6.55 7.11 56.52 0.40 -6.14 16 14 H -0.29 -7.12 7.11 56.52 0.40 -6.72 16 15 H -0.28 -6.90 7.11 56.52 0.40 -6.50 16 16 C 0.13 3.00 6.61 -67.93 -0.45 2.55 16 17 C -0.19 -4.05 9.82 -26.69 -0.26 -4.32 16 18 C -0.23 -4.67 10.09 -26.69 -0.27 -4.94 16 19 N -0.30 -6.20 12.57 33.68 0.42 -5.77 16 20 N -0.38 -6.59 4.02 -63.85 -0.26 -6.84 16 21 C 0.11 1.23 11.28 59.85 0.67 1.91 16 22 H 0.08 0.82 8.14 -51.93 -0.42 0.39 16 23 H 0.08 1.07 7.91 -51.93 -0.41 0.66 16 24 H 0.07 0.65 7.08 -51.93 -0.37 0.28 16 25 H 0.04 1.02 8.04 -51.93 -0.42 0.60 16 26 H 0.12 3.27 5.37 -51.93 -0.28 2.99 16 27 H 0.26 6.97 8.32 -40.82 -0.34 6.63 16 28 H 0.09 1.87 8.10 -51.93 -0.42 1.45 16 29 H 0.10 2.27 6.97 -51.93 -0.36 1.90 16 30 H 0.07 1.34 8.14 -51.93 -0.42 0.92 16 31 H 0.07 1.29 8.14 -51.93 -0.42 0.87 16 32 H 0.08 1.82 7.99 -51.93 -0.42 1.41 16 33 H 0.07 0.64 8.14 -51.93 -0.42 0.21 16 34 H 0.08 0.67 7.05 -51.93 -0.37 0.30 16 35 H 0.09 0.92 8.14 -51.93 -0.42 0.49 16 LS Contribution 309.83 15.07 4.67 4.67 Total: -1.00 -30.28 309.83 -7.57 -37.86 By element: Atomic # 1 Polarization: 5.63 SS G_CDS: -4.67 Total: 0.97 kcal Atomic # 6 Polarization: -6.03 SS G_CDS: -1.58 Total: -7.61 kcal Atomic # 7 Polarization: -50.66 SS G_CDS: 0.34 Total: -50.32 kcal Atomic # 14 Polarization: 21.57 SS G_CDS: -4.91 Total: 16.66 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.43 Total: -2.22 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -30.28 -7.57 -37.86 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000421325472.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 157.560 kcal (2) G-P(sol) polarization free energy of solvation -30.284 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 127.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 119.702 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds