Wall clock time and date at job start Mon Mar 30 2020 05:21:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.36885 * 126.39965 * 2 1 4 4 Cl 1.73604 * 126.59574 * 0.02562 * 3 2 1 5 5 C 1.34796 * 106.80433 * 180.22176 * 3 2 1 6 6 N 1.34171 * 108.01181 * 359.77905 * 5 3 2 7 7 C 1.30474 * 109.27010 * 359.97438 * 6 5 3 8 8 C 1.50699 * 125.64311 * 179.97438 * 7 6 5 9 9 N 1.46895 * 109.47567 * 264.22950 * 8 7 6 10 10 C 1.47843 * 111.00340 * 54.49075 * 9 8 7 11 11 C 1.54902 * 104.79583 * 146.36654 * 10 9 8 12 12 C 1.55139 * 101.65332 * 322.92884 * 11 10 9 13 13 H 1.09000 * 110.86030 * 277.20555 * 12 11 10 14 14 C 1.50700 * 110.70588 * 154.03410 * 12 11 10 15 15 H 1.08001 * 120.00632 * 252.06539 * 14 12 11 16 16 C 1.37879 * 119.99712 * 72.06767 * 14 12 11 17 17 N 1.31520 * 120.00305 * 6.65362 * 16 14 12 18 18 Si 1.86798 * 119.99946 * 186.65720 * 16 14 12 19 19 H 1.48500 * 109.47129 * 84.98327 * 18 16 14 20 20 H 1.48499 * 109.47267 * 324.98123 * 18 16 14 21 21 H 1.48505 * 109.47364 * 204.97827 * 18 16 14 22 22 C 1.47443 * 111.00082 * 175.34025 * 9 8 7 23 23 H 1.09006 * 109.47277 * 274.23297 * 1 2 3 24 24 H 1.08996 * 109.47562 * 34.23215 * 1 2 3 25 25 H 1.08995 * 109.47272 * 154.23598 * 1 2 3 26 26 H 1.07995 * 125.99148 * 179.81061 * 5 3 2 27 27 H 1.08996 * 109.46740 * 144.22324 * 8 7 6 28 28 H 1.09007 * 109.46963 * 24.23153 * 8 7 6 29 29 H 1.09001 * 110.37469 * 265.19705 * 10 9 8 30 30 H 1.09000 * 110.37389 * 27.53772 * 10 9 8 31 31 H 1.09007 * 110.99180 * 204.83914 * 11 10 9 32 32 H 1.08997 * 110.99403 * 81.02383 * 11 10 9 33 33 H 0.96996 * 120.00042 * 180.02562 * 17 16 14 34 34 H 1.08998 * 109.89181 * 117.33121 * 22 9 8 35 35 H 1.08997 * 110.02050 * 356.21768 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2773 1.1018 0.0000 4 17 1.7696 2.7619 0.0006 5 6 3.5472 0.6497 -0.0050 6 7 3.5101 -0.6915 -0.0030 7 6 2.2670 -1.0879 0.0035 8 6 1.8025 -2.5215 0.0071 9 7 1.5121 -2.9457 -1.3689 10 6 2.6763 -2.7164 -2.2509 11 6 2.6290 -3.8752 -3.2777 12 6 2.1425 -5.0554 -2.3961 13 1 2.9754 -5.5055 -1.8560 14 6 1.4321 -6.0880 -3.2328 15 1 0.3601 -6.1973 -3.1607 16 6 2.1509 -6.8934 -4.0906 17 7 3.4655 -6.8528 -4.0844 18 14 1.2576 -8.0423 -5.2617 19 1 0.8870 -7.3022 -6.4946 20 1 0.0294 -8.5597 -4.6068 21 1 2.1464 -9.1784 -5.6148 22 6 1.1608 -4.3768 -1.4177 23 1 -0.3634 0.0759 1.0249 24 1 -0.3634 0.8496 -0.5781 25 1 -0.3633 -0.9255 -0.4467 26 1 4.4381 1.2601 -0.0093 27 1 0.9004 -2.6094 0.6125 28 1 2.5841 -3.1556 0.4256 29 1 2.5848 -1.7559 -2.7582 30 1 3.6016 -2.7563 -1.6761 31 1 3.6195 -4.0756 -3.6863 32 1 1.9157 -3.6626 -4.0739 33 1 3.9711 -7.4191 -4.6881 34 1 0.1383 -4.4956 -1.7762 35 1 1.2598 -4.8193 -0.4265 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000700102946.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:21:42 Heat of formation + Delta-G solvation = 59.641356 kcal Electronic energy + Delta-G solvation = -18403.631766 eV Core-core repulsion = 15463.538577 eV Total energy + Delta-G solvation = -2940.093188 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 269.099 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -42.19608 -38.06323 -36.87803 -34.15109 -33.35760 -31.41133 -28.93356 -28.24215 -27.17677 -25.47788 -23.87896 -21.55207 -20.58540 -19.56026 -19.51705 -17.28730 -16.56377 -16.14428 -15.28013 -14.96923 -14.56341 -14.35828 -13.96191 -13.36019 -13.12939 -12.95180 -12.75628 -12.44364 -12.18033 -11.91685 -11.64333 -11.36189 -11.17409 -11.07130 -10.66469 -10.60195 -10.29406 -10.01238 -9.69776 -9.65961 -9.35645 -8.91504 -8.39327 -8.35052 -7.73882 -6.03469 -4.05201 1.51678 1.77228 2.85630 2.99616 3.30979 3.37624 3.39605 4.33003 4.44175 4.62888 4.74535 4.91929 5.00166 5.28949 5.33175 5.39741 5.50911 5.71127 5.83872 6.06942 6.13021 6.23304 6.35538 6.44673 6.56846 6.80960 6.95127 7.09301 7.14435 7.49248 7.54420 7.63925 7.85787 7.96340 7.97610 8.39935 8.97076 9.58257 11.06933 Molecular weight = 269.10amu Principal moments of inertia in cm(-1) A = 0.044220 B = 0.003877 C = 0.003797 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 633.050386 B = 7220.577241 C = 7373.187643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.443 5.443 3 C 0.003 3.997 4 Cl -0.017 7.017 5 C 0.008 3.992 6 N -0.477 5.477 7 C 0.248 3.752 8 C 0.129 3.871 9 N -0.531 5.531 10 C 0.043 3.957 11 C -0.109 4.109 12 C 0.034 3.966 13 H 0.039 0.961 14 C -0.512 4.512 15 H 0.057 0.943 16 C 0.064 3.936 17 N -0.889 5.889 18 Si 0.890 3.110 19 H -0.280 1.280 20 H -0.275 1.275 21 H -0.288 1.288 22 C 0.048 3.952 23 H 0.076 0.924 24 H 0.084 0.916 25 H 0.105 0.895 26 H 0.177 0.823 27 H 0.086 0.914 28 H 0.070 0.930 29 H 0.054 0.946 30 H 0.048 0.952 31 H 0.064 0.936 32 H 0.055 0.945 33 H 0.261 0.739 34 H 0.072 0.928 35 H 0.038 0.962 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.784 15.494 9.185 18.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.128 5.128 3 C -0.137 4.137 4 Cl 0.011 6.989 5 C -0.143 4.143 6 N -0.196 5.196 7 C -0.014 4.014 8 C -0.001 4.001 9 N -0.257 5.257 10 C -0.085 4.085 11 C -0.148 4.148 12 C 0.015 3.985 13 H 0.058 0.942 14 C -0.551 4.551 15 H 0.075 0.925 16 C -0.138 4.138 17 N -0.527 5.527 18 Si 0.718 3.282 19 H -0.206 1.206 20 H -0.200 1.200 21 H -0.214 1.214 22 C -0.079 4.079 23 H 0.095 0.905 24 H 0.103 0.897 25 H 0.124 0.876 26 H 0.195 0.805 27 H 0.104 0.896 28 H 0.088 0.912 29 H 0.073 0.927 30 H 0.066 0.934 31 H 0.083 0.917 32 H 0.074 0.926 33 H 0.070 0.930 34 H 0.090 0.910 35 H 0.056 0.944 Dipole moment (debyes) X Y Z Total from point charges -4.587 15.338 8.942 18.337 hybrid contribution -0.544 -0.171 -0.444 0.723 sum -5.131 15.167 8.498 18.126 Atomic orbital electron populations 1.22166 0.75897 1.05967 1.03501 1.45071 1.08031 1.05262 1.54404 1.21717 0.91350 0.82102 1.18566 1.98359 1.91844 1.11075 1.97629 1.22144 0.94326 0.91215 1.06604 1.70482 1.18537 1.10473 1.20102 1.23192 0.85142 0.90332 1.02783 1.20688 1.00297 0.85534 0.93544 1.63836 1.36154 1.20765 1.04946 1.23066 0.91141 0.99187 0.95072 1.22699 1.01106 0.93936 0.97083 1.19832 0.93896 0.92533 0.92241 0.94238 1.21039 0.93512 1.17663 1.22866 0.92460 1.24982 0.94763 0.96718 0.97326 1.69966 1.05165 1.39926 1.37600 0.86650 0.79611 0.80368 0.81601 1.20593 1.19954 1.21359 1.23028 1.01383 0.84327 0.99136 0.90494 0.89739 0.87591 0.80546 0.89610 0.91208 0.92735 0.93396 0.91719 0.92592 0.92966 0.90965 0.94374 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.63 10.76 59.85 0.64 1.28 16 2 N -0.44 -5.78 3.16 -117.77 -0.37 -6.16 16 3 C 0.00 0.04 7.49 -16.52 -0.12 -0.08 16 4 Cl -0.02 -0.18 29.04 -51.86 -1.51 -1.68 16 5 C 0.01 0.11 11.86 -17.75 -0.21 -0.10 16 6 N -0.48 -7.87 10.90 -10.76 -0.12 -7.99 16 7 C 0.25 3.78 6.32 -155.33 -0.98 2.80 16 8 C 0.13 1.96 4.58 -4.98 -0.02 1.93 16 9 N -0.53 -9.53 5.27 -232.70 -1.23 -10.76 16 10 C 0.04 0.85 5.68 -2.30 -0.01 0.83 16 11 C -0.11 -2.54 6.35 -24.60 -0.16 -2.69 16 12 C 0.03 0.84 2.68 -89.95 -0.24 0.59 16 13 H 0.04 1.07 8.07 -51.93 -0.42 0.65 16 14 C -0.51 -13.76 8.42 -34.44 -0.29 -14.05 16 15 H 0.06 1.51 7.51 -52.49 -0.39 1.11 16 16 C 0.06 1.76 5.38 -17.82 -0.10 1.67 16 17 N -0.89 -25.53 13.16 55.43 0.73 -24.80 16 18 Si 0.89 21.07 29.54 -169.99 -5.02 16.05 16 19 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 20 H -0.27 -6.37 7.11 56.52 0.40 -5.97 16 21 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 22 C 0.05 0.96 6.47 -2.83 -0.02 0.94 16 23 H 0.08 0.57 8.14 -51.93 -0.42 0.15 16 24 H 0.08 0.71 8.05 -51.93 -0.42 0.29 16 25 H 0.11 1.03 7.61 -51.93 -0.40 0.64 16 26 H 0.18 2.00 8.06 -52.49 -0.42 1.57 16 27 H 0.09 1.07 7.92 -51.93 -0.41 0.66 16 28 H 0.07 1.12 8.11 -51.93 -0.42 0.70 16 29 H 0.05 1.08 8.14 -51.93 -0.42 0.65 16 30 H 0.05 0.99 7.45 -51.93 -0.39 0.60 16 31 H 0.06 1.61 8.14 -51.93 -0.42 1.19 16 32 H 0.06 1.33 8.04 -51.93 -0.42 0.92 16 33 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 34 H 0.07 1.46 7.61 -51.93 -0.40 1.06 16 35 H 0.04 0.70 7.57 -51.93 -0.39 0.31 16 LS Contribution 307.10 15.07 4.63 4.63 Total: -1.00 -29.57 307.10 -9.27 -38.84 By element: Atomic # 1 Polarization: 3.63 SS G_CDS: -4.88 Total: -1.24 kcal Atomic # 6 Polarization: -5.37 SS G_CDS: -1.51 Total: -6.88 kcal Atomic # 7 Polarization: -48.72 SS G_CDS: -0.99 Total: -49.71 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -5.02 Total: 16.05 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -1.51 Total: -1.68 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -29.57 -9.27 -38.84 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000700102946.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.485 kcal (2) G-P(sol) polarization free energy of solvation -29.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.844 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds