Wall clock time and date at job start Mon Mar 30 2020 04:58:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35953 * 117.00287 * 2 1 4 4 C 1.38657 * 120.41145 * 0.02562 * 3 2 1 5 5 N 1.31929 * 120.86192 * 180.02562 * 4 3 2 6 6 C 1.31921 * 121.81221 * 359.97438 * 5 4 3 7 7 F 1.35104 * 119.63409 * 180.02562 * 6 5 4 8 8 C 1.39153 * 120.72937 * 0.02562 * 6 5 4 9 9 N 1.40091 * 120.46295 * 180.02562 * 8 6 5 10 10 C 1.34772 * 119.99765 * 204.48262 * 9 8 6 11 11 O 1.21590 * 120.00359 * 5.71110 * 10 9 8 12 12 N 1.34780 * 120.00163 * 185.71399 * 10 9 8 13 13 C 1.46497 * 120.00371 * 179.97438 * 12 10 9 14 14 C 1.50702 * 109.46964 * 180.02562 * 13 12 10 15 15 H 1.07994 * 120.00332 * 359.97438 * 14 13 12 16 16 C 1.37876 * 119.99602 * 180.02562 * 14 13 12 17 17 N 1.31518 * 120.00217 * 359.97438 * 16 14 13 18 18 Si 1.86796 * 119.99946 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.47270 * 359.97438 * 18 16 14 20 20 H 1.48503 * 109.47198 * 119.99682 * 18 16 14 21 21 H 1.48508 * 109.47267 * 239.99726 * 18 16 14 22 22 C 1.39037 * 119.07072 * 359.97438 * 8 6 5 23 23 H 1.09004 * 109.47356 * 59.99210 * 1 2 3 24 24 H 1.09000 * 109.47426 * 179.97438 * 1 2 3 25 25 H 1.09005 * 109.46950 * 299.99726 * 1 2 3 26 26 H 1.08000 * 119.56575 * 359.73501 * 4 3 2 27 27 H 0.97006 * 120.00108 * 24.47796 * 9 8 6 28 28 H 0.97005 * 119.99863 * 359.97438 * 12 10 9 29 29 H 1.08996 * 109.47018 * 300.00059 * 13 12 10 30 30 H 1.08997 * 109.46947 * 59.99942 * 13 12 10 31 31 H 0.97003 * 119.99867 * 180.02562 * 17 16 14 32 32 H 1.08008 * 120.82558 * 180.02562 * 22 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 1.2995 2.3796 0.0005 5 7 1.8892 3.5598 0.0000 6 6 3.2029 3.6807 -0.0005 7 9 3.7604 4.9113 -0.0005 8 6 4.0206 2.5548 -0.0011 9 7 5.4150 2.6897 -0.0011 10 6 6.1879 1.6975 -0.4853 11 8 5.6752 0.7314 -1.0164 12 7 7.5294 1.7761 -0.3808 13 6 8.3696 0.6974 -0.9066 14 6 9.8200 1.0270 -0.6647 15 1 10.0891 1.9481 -0.1692 16 6 10.8036 0.1531 -1.0768 17 7 10.4760 -0.9684 -1.6807 18 14 12.6015 0.5620 -0.7776 19 1 12.7028 1.8723 -0.0861 20 1 13.2151 -0.4933 0.0681 21 1 13.3162 0.6323 -2.0775 22 6 3.4343 1.2941 -0.0005 23 1 -0.3634 0.5140 -0.8899 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8901 26 1 0.2210 2.3227 -0.0034 27 1 5.8241 3.4973 0.3474 28 1 7.9385 2.5470 0.0426 29 1 8.1204 -0.2360 -0.4020 30 1 8.1947 0.5896 -1.9771 31 1 11.1680 -1.5833 -1.9703 32 1 4.0419 0.4011 -0.0005 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000861582339.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:58:54 Heat of formation + Delta-G solvation = -90.707469 kcal Electronic energy + Delta-G solvation = -19730.607979 eV Core-core repulsion = 16219.825707 eV Total energy + Delta-G solvation = -3510.782272 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 269.096 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -50.06547 -42.14252 -41.00218 -39.08813 -36.67633 -36.02854 -34.48478 -32.71542 -30.79343 -29.09730 -28.26176 -25.61168 -24.72265 -23.71993 -22.10413 -20.32956 -19.67898 -19.12053 -18.68423 -17.91432 -17.63617 -17.32969 -16.68003 -16.61331 -16.51475 -15.88712 -15.73614 -15.12610 -14.96297 -14.48921 -14.31044 -14.11545 -14.05927 -13.91911 -12.90494 -12.84522 -12.77577 -12.38504 -12.34891 -12.22392 -11.61280 -11.45907 -10.86916 -10.79269 -10.16249 -9.83485 -9.21790 -8.29354 -6.45394 -0.27995 -0.07823 1.33376 1.45594 1.46420 1.59513 1.90289 2.12570 2.38096 2.40681 2.50881 3.06484 3.20977 3.30692 3.52100 3.90313 3.99097 4.37563 4.45576 4.68792 4.71995 4.81080 4.92099 5.02899 5.24184 5.40414 5.42183 5.53624 5.79572 5.96737 6.14959 6.41405 6.64543 6.98872 7.23139 7.42849 8.82873 Molecular weight = 269.10amu Principal moments of inertia in cm(-1) A = 0.030453 B = 0.003857 C = 0.003458 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 919.220504 B = 7258.214689 C = 8095.700805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.323 6.323 3 C 0.105 3.895 4 C 0.035 3.965 5 N -0.462 5.462 6 C 0.226 3.774 7 F -0.112 7.112 8 C 0.149 3.851 9 N -0.664 5.664 10 C 0.695 3.305 11 O -0.614 6.614 12 N -0.708 5.708 13 C 0.282 3.718 14 C -0.555 4.555 15 H 0.085 0.915 16 C 0.006 3.994 17 N -0.929 5.929 18 Si 0.984 3.016 19 H -0.254 1.254 20 H -0.279 1.279 21 H -0.280 1.280 22 C -0.128 4.128 23 H 0.076 0.924 24 H 0.122 0.878 25 H 0.080 0.920 26 H 0.211 0.789 27 H 0.428 0.572 28 H 0.409 0.591 29 H -0.005 1.005 30 H -0.007 1.007 31 H 0.269 0.731 32 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.272 7.734 6.116 20.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.234 6.234 3 C 0.055 3.945 4 C -0.124 4.124 5 N -0.176 5.176 6 C 0.068 3.932 7 F -0.092 7.092 8 C 0.048 3.952 9 N -0.312 5.312 10 C 0.395 3.605 11 O -0.494 6.494 12 N -0.361 5.361 13 C 0.160 3.840 14 C -0.593 4.593 15 H 0.103 0.897 16 C -0.194 4.194 17 N -0.567 5.567 18 Si 0.808 3.192 19 H -0.177 1.177 20 H -0.205 1.205 21 H -0.206 1.206 22 C -0.157 4.157 23 H 0.094 0.906 24 H 0.140 0.860 25 H 0.099 0.901 26 H 0.227 0.773 27 H 0.268 0.732 28 H 0.245 0.755 29 H 0.013 0.987 30 H 0.011 0.989 31 H 0.078 0.922 32 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -18.903 7.270 5.563 21.003 hybrid contribution 1.788 0.031 0.149 1.794 sum -17.115 7.301 5.711 19.464 Atomic orbital electron populations 1.23601 0.75008 1.06519 1.03430 1.86158 1.24606 1.24952 1.87727 1.19825 0.91588 0.86932 0.96130 1.23076 1.01903 0.84047 1.03375 1.66900 1.08675 1.29312 1.12714 1.17508 0.87803 0.79187 1.08676 1.91585 1.83635 1.39688 1.94248 1.17980 0.83348 0.92813 1.01102 1.42369 1.02974 1.21341 1.64541 1.16161 0.82419 0.82680 0.79257 1.90858 1.73470 1.34503 1.50585 1.45373 1.02995 1.25721 1.62031 1.18561 0.88650 0.84460 0.92355 1.21613 0.90269 1.07147 1.40293 0.89711 1.26010 1.04958 0.94340 0.94062 1.70135 1.35583 1.11324 1.39687 0.85116 0.77303 0.78866 0.77954 1.17718 1.20493 1.20574 1.21022 0.93420 0.97784 1.03431 0.90574 0.86022 0.90099 0.77262 0.73244 0.75485 0.98718 0.98928 0.92202 0.83300 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.08 9.82 113.37 1.11 1.19 16 2 O -0.32 -7.23 10.51 -93.02 -0.98 -8.21 16 3 C 0.10 2.63 6.70 22.57 0.15 2.78 16 4 C 0.04 0.73 10.21 84.78 0.87 1.59 16 5 N -0.46 -11.83 10.36 -196.08 -2.03 -13.87 16 6 C 0.23 6.29 8.42 84.90 0.72 7.01 16 7 F -0.11 -2.99 16.84 44.97 0.76 -2.23 16 8 C 0.15 4.56 6.46 38.23 0.25 4.80 16 9 N -0.66 -20.33 5.33 -316.71 -1.69 -22.02 16 10 C 0.69 27.99 8.38 179.05 1.50 29.49 16 11 O -0.61 -29.81 13.55 -4.00 -0.05 -29.86 16 12 N -0.71 -29.14 5.55 -482.30 -2.68 -31.82 16 13 C 0.28 15.04 5.43 85.63 0.46 15.51 16 14 C -0.56 -29.38 9.28 25.60 0.24 -29.14 16 15 H 0.08 4.05 7.60 -2.91 -0.02 4.02 16 16 C 0.01 0.34 5.46 84.65 0.46 0.80 16 17 N -0.93 -54.91 13.29 21.45 0.28 -54.62 16 18 Si 0.98 41.58 29.54 68.60 2.03 43.60 16 19 H -0.25 -9.90 7.11 99.48 0.71 -9.20 16 20 H -0.28 -11.62 7.11 99.48 0.71 -10.92 16 21 H -0.28 -11.69 7.11 99.48 0.71 -10.98 16 22 C -0.13 -4.09 8.77 22.66 0.20 -3.89 16 23 H 0.08 0.55 7.67 -2.39 -0.02 0.53 16 24 H 0.12 0.84 8.14 -2.39 -0.02 0.82 16 25 H 0.08 0.50 7.68 -2.38 -0.02 0.48 16 26 H 0.21 2.37 6.30 -2.91 -0.02 2.35 16 27 H 0.43 10.03 8.48 -92.70 -0.79 9.24 16 28 H 0.41 13.67 8.34 -92.70 -0.77 12.90 16 29 H -0.01 -0.31 8.14 -2.39 -0.02 -0.33 16 30 H -0.01 -0.43 8.14 -2.39 -0.02 -0.45 16 31 H 0.27 14.83 8.31 -92.71 -0.77 14.06 16 32 H 0.15 5.73 5.88 -2.91 -0.02 5.72 16 Total: -1.00 -71.86 289.91 1.24 -70.62 By element: Atomic # 1 Polarization: 18.61 SS G_CDS: -0.36 Total: 18.25 kcal Atomic # 6 Polarization: 24.19 SS G_CDS: 5.96 Total: 30.15 kcal Atomic # 7 Polarization: -116.21 SS G_CDS: -6.11 Total: -122.33 kcal Atomic # 8 Polarization: -37.04 SS G_CDS: -1.03 Total: -38.07 kcal Atomic # 9 Polarization: -2.99 SS G_CDS: 0.76 Total: -2.23 kcal Atomic # 14 Polarization: 41.58 SS G_CDS: 2.03 Total: 43.60 kcal Total: -71.86 1.24 -70.62 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000861582339.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.086 kcal (2) G-P(sol) polarization free energy of solvation -71.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.236 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -70.621 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.707 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds