Wall clock time and date at job start Mon Mar 30 2020 05:15:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.48136 * 110.99783 * 2 1 4 4 C 1.54789 * 101.87649 * 95.47836 * 3 2 1 5 5 H 1.09004 * 111.02873 * 265.73170 * 4 3 2 6 6 N 1.46496 * 110.85294 * 142.18144 * 4 3 2 7 7 C 1.34783 * 120.00023 * 160.73290 * 6 4 3 8 8 O 1.21273 * 120.00007 * 359.97438 * 7 6 4 9 9 C 1.50699 * 119.99595 * 180.02562 * 7 6 4 10 10 H 1.08997 * 109.47443 * 319.99602 * 9 7 6 11 11 N 1.46903 * 109.46604 * 200.00003 * 9 7 6 12 12 C 1.52995 * 109.47514 * 80.00280 * 9 7 6 13 13 C 1.52997 * 109.47600 * 184.99448 * 12 9 7 14 14 C 1.50694 * 109.47460 * 179.97438 * 13 12 9 15 15 H 1.08002 * 120.00179 * 359.97438 * 14 13 12 16 16 C 1.37879 * 120.00472 * 180.02562 * 14 13 12 17 17 N 1.31514 * 119.99350 * 359.97438 * 16 14 13 18 18 Si 1.86798 * 120.00608 * 179.97438 * 16 14 13 19 19 H 1.48490 * 109.47339 * 179.97438 * 18 16 14 20 20 H 1.48493 * 109.47239 * 300.00306 * 18 16 14 21 21 H 1.48504 * 109.46636 * 59.99865 * 18 16 14 22 22 C 1.51806 * 102.23452 * 23.99713 * 4 3 2 23 23 O 1.21278 * 126.04040 * 165.16109 * 22 4 3 24 24 N 1.34594 * 107.91973 * 345.17742 * 22 4 3 25 25 H 1.09004 * 109.47061 * 300.18425 * 1 2 3 26 26 H 1.08995 * 109.47107 * 60.18926 * 1 2 3 27 27 H 1.09004 * 109.46881 * 180.19331 * 1 2 3 28 28 H 1.09002 * 110.95174 * 337.32899 * 3 2 1 29 29 H 1.08999 * 110.94798 * 213.62342 * 3 2 1 30 30 H 0.97001 * 120.00017 * 340.73635 * 6 4 3 31 31 H 1.00893 * 111.00208 * 299.99502 * 11 9 7 32 32 H 1.00904 * 111.00274 * 63.95945 * 11 9 7 33 33 H 1.09003 * 109.47604 * 64.99269 * 12 9 7 34 34 H 1.08999 * 109.47292 * 304.99634 * 12 9 7 35 35 H 1.09005 * 109.46800 * 60.00280 * 13 12 9 36 36 H 1.08998 * 109.47382 * 300.00079 * 13 12 9 37 37 H 0.97005 * 119.99661 * 179.97438 * 17 16 14 38 38 H 0.96999 * 123.52328 * 178.40891 * 24 22 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9998 1.3830 0.0000 4 6 2.2490 1.6286 1.5078 5 1 1.3942 2.1223 1.9702 6 7 3.4724 2.4075 1.7141 7 6 3.6702 3.0557 2.8792 8 8 2.8352 2.9945 3.7565 9 6 4.9285 3.8575 3.0911 10 1 5.7772 3.3207 2.6672 11 7 5.1451 4.0574 4.5303 12 6 4.7893 5.2167 2.4027 13 6 6.1103 5.9810 2.5108 14 6 5.9733 7.3195 1.8322 15 1 5.0378 7.5971 1.3695 16 6 7.0427 8.1893 1.8009 17 7 8.1821 7.8509 2.3639 18 14 6.8732 9.8482 0.9591 19 1 8.1552 10.5899 1.0642 20 1 6.5344 9.6446 -0.4723 21 1 5.7947 10.6290 1.6167 22 6 2.4111 0.2166 2.0413 23 8 2.8687 -0.0898 3.1218 24 7 1.9576 -0.6352 1.1030 25 1 -0.3633 0.5167 0.8884 26 1 -0.3633 0.5109 -0.8916 27 1 -0.3633 -1.0277 0.0035 28 1 1.2626 2.0835 -0.3924 29 1 2.9308 1.4431 -0.5637 30 1 4.1401 2.4569 1.0122 31 1 4.3715 4.5534 4.9468 32 1 5.3044 3.1775 4.9977 33 1 3.9977 5.7894 2.8858 34 1 4.5406 5.0680 1.3519 35 1 6.9020 5.4083 2.0275 36 1 6.3591 6.1297 3.5616 37 1 8.9346 8.4627 2.3416 38 1 1.9765 -1.6000 1.2013 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000691623148.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:15:08 Heat of formation + Delta-G solvation = -32.943213 kcal Electronic energy + Delta-G solvation = -20831.545155 eV Core-core repulsion = 17517.135218 eV Total energy + Delta-G solvation = -3314.409938 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 270.148 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -41.61311 -39.53637 -37.68326 -35.33227 -34.78505 -32.79570 -31.73087 -30.28598 -30.00770 -26.65235 -25.79647 -23.77739 -23.03165 -21.44381 -20.54457 -19.91057 -18.14304 -17.39029 -16.94770 -16.59776 -16.13811 -15.54080 -15.39572 -14.90818 -14.48826 -14.37761 -14.22517 -13.87013 -13.75005 -13.46369 -13.35659 -12.58823 -12.31222 -12.27109 -12.01677 -11.55582 -10.94121 -10.88089 -10.68838 -10.58479 -10.49822 -10.16818 -9.80356 -9.38305 -9.22332 -9.01238 -8.77000 -8.36098 -8.21089 -5.93803 -3.96293 2.03997 2.34253 2.73145 3.05755 3.35542 3.40563 3.42439 3.70093 3.93345 4.07320 4.49443 4.51454 4.76425 4.89066 4.92629 5.02575 5.12634 5.28671 5.30668 5.41560 5.53718 5.72455 5.81193 6.18455 6.41446 6.50614 6.62840 7.06861 7.11556 7.29783 7.52567 7.75641 7.81265 7.84671 7.95906 8.13274 8.23788 8.47738 9.11612 9.66784 11.17052 Molecular weight = 270.15amu Principal moments of inertia in cm(-1) A = 0.028446 B = 0.003728 C = 0.003432 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 984.071505 B = 7508.114689 C = 8156.171423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.017 4.017 2 N -0.289 5.289 3 C 0.025 3.975 4 C 0.085 3.915 5 H 0.123 0.877 6 N -0.712 5.712 7 C 0.489 3.511 8 O -0.539 6.539 9 C 0.082 3.918 10 H 0.099 0.901 11 N -0.806 5.806 12 C -0.095 4.095 13 C 0.031 3.969 14 C -0.524 4.524 15 H 0.051 0.949 16 C 0.058 3.942 17 N -0.892 5.892 18 Si 0.890 3.110 19 H -0.288 1.288 20 H -0.278 1.278 21 H -0.278 1.278 22 C 0.490 3.510 23 O -0.496 6.496 24 N -0.578 5.578 25 H 0.040 0.960 26 H 0.091 0.909 27 H 0.079 0.921 28 H 0.109 0.891 29 H 0.113 0.887 30 H 0.409 0.591 31 H 0.348 0.652 32 H 0.336 0.664 33 H 0.053 0.947 34 H 0.054 0.946 35 H 0.013 0.987 36 H 0.035 0.965 37 H 0.260 0.740 38 H 0.429 0.571 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.260 -16.487 -7.237 22.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 N -0.107 5.107 3 C -0.102 4.102 4 C -0.026 4.026 5 H 0.140 0.860 6 N -0.367 5.367 7 C 0.275 3.725 8 O -0.415 6.415 9 C -0.034 4.034 10 H 0.117 0.883 11 N -0.333 5.333 12 C -0.133 4.133 13 C -0.006 4.006 14 C -0.562 4.562 15 H 0.070 0.930 16 C -0.143 4.143 17 N -0.531 5.531 18 Si 0.718 3.282 19 H -0.213 1.213 20 H -0.204 1.204 21 H -0.203 1.203 22 C 0.272 3.728 23 O -0.365 6.365 24 N -0.330 5.330 25 H 0.058 0.942 26 H 0.109 0.891 27 H 0.098 0.902 28 H 0.127 0.873 29 H 0.131 0.869 30 H 0.245 0.755 31 H 0.162 0.838 32 H 0.148 0.852 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.032 0.968 36 H 0.054 0.946 37 H 0.070 0.930 38 H 0.273 0.727 Dipole moment (debyes) X Y Z Total from point charges -13.596 -16.335 -6.562 22.243 hybrid contribution -1.105 0.305 -0.103 1.151 sum -14.701 -16.030 -6.666 22.749 Atomic orbital electron populations 1.23280 0.87198 1.03685 1.02420 1.64883 1.08237 1.14602 1.22970 1.23919 1.03890 0.88354 0.94086 1.22063 0.92309 0.91035 0.97199 0.85953 1.45852 1.20853 1.50981 1.19057 1.22932 0.90542 0.78231 0.80826 1.90662 1.46086 1.62324 1.42383 1.21851 0.91975 0.97610 0.91998 0.88287 1.59010 1.47979 1.25266 1.01080 1.21671 1.02863 0.91317 0.97485 1.19015 0.89620 0.93443 0.98545 1.21234 0.97685 1.01506 1.35785 0.93032 1.24995 0.95438 0.98224 0.95666 1.69967 1.02343 1.36433 1.44388 0.86706 0.77222 0.84330 0.79983 1.21343 1.20367 1.20336 1.21930 0.77795 0.89160 0.83919 1.90804 1.43678 1.81991 1.20066 1.45911 1.62875 1.09208 1.14974 0.94158 0.89069 0.90192 0.87292 0.86922 0.75475 0.83836 0.85204 0.92800 0.92750 0.96826 0.94639 0.93021 0.72696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.02 -0.09 9.74 60.07 0.58 0.50 16 2 N -0.29 -1.99 5.88 -119.13 -0.70 -2.69 16 3 C 0.03 0.17 6.86 -2.20 -0.02 0.15 16 4 C 0.09 0.92 3.34 -67.60 -0.23 0.69 16 5 H 0.12 1.44 7.71 -51.93 -0.40 1.04 16 6 N -0.71 -8.68 5.19 -53.48 -0.28 -8.95 16 7 C 0.49 7.84 7.06 -10.98 -0.08 7.77 16 8 O -0.54 -10.32 15.98 5.56 0.09 -10.23 16 9 C 0.08 1.38 3.15 -68.87 -0.22 1.17 16 10 H 0.10 1.59 8.14 -51.93 -0.42 1.16 16 11 N -0.81 -14.11 8.44 -5.66 -0.05 -14.16 16 12 C -0.10 -1.87 4.78 -26.73 -0.13 -2.00 16 13 C 0.03 0.78 4.86 -27.89 -0.14 0.64 16 14 C -0.52 -14.62 9.11 -34.44 -0.31 -14.94 16 15 H 0.05 1.39 7.74 -52.49 -0.41 0.98 16 16 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 17 N -0.89 -26.81 13.29 55.43 0.74 -26.08 16 18 Si 0.89 21.53 29.54 -169.99 -5.02 16.51 16 19 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 20 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 21 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 22 C 0.49 6.17 8.28 -10.52 -0.09 6.08 16 23 O -0.50 -8.60 18.03 5.56 0.10 -8.50 16 24 N -0.58 -5.01 5.96 31.48 0.19 -4.82 16 25 H 0.04 0.23 8.14 -51.93 -0.42 -0.19 16 26 H 0.09 0.30 8.12 -51.93 -0.42 -0.12 16 27 H 0.08 0.34 8.14 -51.93 -0.42 -0.09 16 28 H 0.11 0.50 7.77 -51.93 -0.40 0.10 16 29 H 0.11 0.64 7.80 -51.93 -0.41 0.24 16 30 H 0.41 3.98 8.38 -40.82 -0.34 3.64 16 31 H 0.35 6.13 8.58 -39.30 -0.34 5.79 16 32 H 0.34 5.36 9.06 -39.29 -0.36 5.00 16 33 H 0.05 1.10 8.14 -51.93 -0.42 0.68 16 34 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 35 H 0.01 0.36 8.14 -51.93 -0.42 -0.07 16 36 H 0.04 0.98 7.75 -51.93 -0.40 0.58 16 37 H 0.26 7.41 8.31 -40.82 -0.34 7.07 16 38 H 0.43 3.01 8.96 -185.34 -1.66 1.35 16 LS Contribution 325.32 15.07 4.90 4.90 Total: -1.00 -36.02 325.32 -7.55 -43.57 By element: Atomic # 1 Polarization: 15.63 SS G_CDS: -6.81 Total: 8.82 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -0.71 Total: 1.63 kcal Atomic # 7 Polarization: -56.60 SS G_CDS: -0.10 Total: -56.70 kcal Atomic # 8 Polarization: -18.92 SS G_CDS: 0.19 Total: -18.73 kcal Atomic # 14 Polarization: 21.53 SS G_CDS: -5.02 Total: 16.51 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -36.02 -7.55 -43.57 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000691623148.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.624 kcal (2) G-P(sol) polarization free energy of solvation -36.017 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.568 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds