Wall clock time and date at job start Mon Mar 30 2020 05:36:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42904 * 114.00333 * 2 1 4 4 C 1.52998 * 109.46872 * 179.97438 * 3 2 1 5 5 N 1.46501 * 109.47100 * 65.00478 * 4 3 2 6 6 C 1.46500 * 119.99861 * 269.99490 * 5 4 3 7 7 C 1.50694 * 109.47076 * 270.00097 * 6 5 4 8 8 H 1.08004 * 120.00250 * 359.97438 * 7 6 5 9 9 C 1.37880 * 120.00097 * 180.02562 * 7 6 5 10 10 N 1.31514 * 119.99758 * 359.97438 * 9 7 6 11 11 Si 1.86796 * 120.00274 * 179.97438 * 9 7 6 12 12 H 1.48502 * 109.46901 * 359.97438 * 11 9 7 13 13 H 1.48494 * 109.47267 * 119.99717 * 11 9 7 14 14 H 1.48501 * 109.47172 * 240.00386 * 11 9 7 15 15 C 1.38538 * 119.99896 * 89.99470 * 5 4 3 16 16 C 1.39666 * 120.51914 * 184.99915 * 15 5 4 17 17 C 1.38084 * 118.36062 * 179.72312 * 16 15 5 18 18 N 1.32567 * 119.21352 * 0.25578 * 17 16 15 19 19 C 1.31890 * 121.00270 * 359.97438 * 18 17 16 20 20 Cl 1.73598 * 119.10218 * 180.02562 * 19 18 17 21 21 N 1.31899 * 121.79693 * 359.97438 * 19 18 17 22 22 H 1.08994 * 109.47075 * 300.00075 * 1 2 3 23 23 H 1.09006 * 109.46590 * 59.99830 * 1 2 3 24 24 H 1.08993 * 109.47298 * 179.97438 * 1 2 3 25 25 H 1.09000 * 109.46290 * 59.99981 * 3 2 1 26 26 H 1.08996 * 109.46903 * 300.00197 * 3 2 1 27 27 H 1.08992 * 109.47520 * 304.99790 * 4 3 2 28 28 H 1.09003 * 109.46236 * 184.99955 * 4 3 2 29 29 H 1.09003 * 109.46783 * 30.00295 * 6 5 4 30 30 H 1.09003 * 109.46967 * 150.00033 * 6 5 4 31 31 H 0.97002 * 120.00122 * 180.02562 * 10 9 7 32 32 H 1.08002 * 120.82312 * 0.02562 * 16 15 5 33 33 H 1.07997 * 120.39030 * 180.23015 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1845 0.0006 5 7 3.9767 0.5639 -1.2509 6 6 4.1062 -0.8927 -1.3404 7 6 5.5016 -1.2983 -0.9413 8 1 6.2203 -0.5463 -0.6506 9 6 5.8612 -2.6293 -0.9484 10 7 4.9863 -3.5450 -1.3029 11 14 7.5911 -3.1321 -0.4544 12 1 8.3766 -1.9221 -0.1021 13 1 7.5267 -4.0400 0.7189 14 1 8.2454 -3.8336 -1.5880 15 6 4.2713 1.3543 -2.3498 16 6 4.5921 0.7710 -3.5776 17 6 4.8726 1.6010 -4.6449 18 7 4.8339 2.9146 -4.4705 19 6 4.5320 3.4355 -3.2971 20 17 4.4951 5.1625 -3.1243 21 7 4.2565 2.6802 -2.2515 22 1 -0.3633 0.5138 0.8899 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 1.6886 1.8463 0.8900 26 1 1.6887 1.8464 -0.8899 27 1 3.8508 0.5684 0.8426 28 1 3.9785 2.1764 0.0902 29 1 3.3857 -1.3632 -0.6714 30 1 3.9138 -1.2123 -2.3646 31 1 5.2391 -4.4814 -1.3075 32 1 4.6154 -0.3029 -3.6908 33 1 5.1209 1.1850 -5.6101 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000070846720.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:36:56 Heat of formation + Delta-G solvation = 4.887798 kcal Electronic energy + Delta-G solvation = -18723.789552 eV Core-core repulsion = 15618.177499 eV Total energy + Delta-G solvation = -3105.612054 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.41625 -37.90948 -36.67311 -36.08215 -33.17413 -32.37143 -31.20244 -29.32036 -27.09007 -25.93116 -23.97780 -23.68641 -22.44531 -20.74078 -17.44191 -17.22404 -16.58751 -16.10049 -15.67549 -15.10941 -14.91473 -14.81761 -14.60647 -14.09345 -13.82955 -13.22690 -12.80466 -12.24411 -12.01808 -11.56079 -11.55216 -11.41401 -11.20611 -11.01797 -10.91406 -10.79963 -10.60006 -10.34275 -10.04142 -9.72051 -9.42584 -9.12368 -8.82165 -8.57522 -7.21548 -6.18010 -4.26765 1.40768 1.78209 1.82591 3.20928 3.29513 3.33385 3.59026 4.07812 4.25374 4.34254 4.69056 5.13902 5.23633 5.28670 5.33189 5.45892 5.58278 5.59364 5.63449 5.81088 5.88140 5.94896 6.08543 6.30767 6.64190 6.90436 7.12217 7.36078 7.42295 7.72075 7.93199 8.02747 8.08874 8.52390 8.81538 9.40122 10.87180 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.014028 B = 0.006804 C = 0.005159 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1995.558318 B = 4114.038305 C = 5426.191475 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.376 6.376 3 C 0.049 3.951 4 C 0.125 3.875 5 N -0.556 5.556 6 C 0.250 3.750 7 C -0.539 4.539 8 H 0.060 0.940 9 C 0.066 3.934 10 N -0.890 5.890 11 Si 0.897 3.103 12 H -0.273 1.273 13 H -0.282 1.282 14 H -0.282 1.282 15 C 0.458 3.542 16 C -0.272 4.272 17 C 0.172 3.828 18 N -0.569 5.569 19 C 0.401 3.599 20 Cl -0.004 7.004 21 N -0.584 5.584 22 H 0.035 0.965 23 H 0.034 0.966 24 H 0.083 0.917 25 H 0.052 0.948 26 H 0.046 0.954 27 H 0.089 0.911 28 H 0.094 0.906 29 H 0.056 0.944 30 H 0.037 0.963 31 H 0.265 0.735 32 H 0.157 0.843 33 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.550 9.400 -0.982 10.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.295 6.295 3 C -0.029 4.029 4 C 0.001 3.999 5 N -0.262 5.262 6 C 0.131 3.869 7 C -0.578 4.578 8 H 0.078 0.922 9 C -0.137 4.137 10 N -0.528 5.528 11 Si 0.724 3.276 12 H -0.197 1.197 13 H -0.208 1.208 14 H -0.208 1.208 15 C 0.213 3.787 16 C -0.301 4.301 17 C 0.015 3.985 18 N -0.294 5.294 19 C 0.104 3.896 20 Cl 0.023 6.977 21 N -0.314 5.314 22 H 0.053 0.947 23 H 0.053 0.947 24 H 0.102 0.898 25 H 0.070 0.930 26 H 0.064 0.936 27 H 0.107 0.893 28 H 0.112 0.888 29 H 0.074 0.926 30 H 0.055 0.945 31 H 0.075 0.925 32 H 0.175 0.825 33 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -5.534 9.921 -0.699 11.381 hybrid contribution 0.723 -0.879 0.257 1.166 sum -4.811 9.042 -0.443 10.252 Atomic orbital electron populations 1.22679 0.82076 1.02446 0.99166 1.88055 1.18752 1.27437 1.95207 1.23045 0.95193 0.84939 0.99762 1.21456 0.91088 0.99862 0.87494 1.47253 1.63598 1.07774 1.07603 1.19594 0.97549 0.70813 0.98938 1.21543 0.97168 0.92476 1.46580 0.92174 1.24917 0.97622 0.96257 0.94925 1.69939 1.34322 1.01206 1.47308 0.86453 0.84141 0.78636 0.78323 1.19747 1.20803 1.20791 1.18462 0.86307 0.86016 0.87887 1.22440 1.10568 1.03767 0.93291 1.22680 0.90389 0.86906 0.98562 1.67757 1.22855 1.14707 1.24053 1.22251 0.93339 0.88145 0.85836 1.98376 1.96486 1.05367 1.97462 1.67190 1.26544 1.04857 1.32791 0.94656 0.94705 0.89820 0.93029 0.93569 0.89317 0.88787 0.92569 0.94533 0.92543 0.82501 0.81571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.43 11.01 101.05 1.11 1.55 16 2 O -0.38 -6.54 9.53 -35.23 -0.34 -6.88 16 3 C 0.05 0.76 6.28 37.16 0.23 1.00 16 4 C 0.13 2.21 5.89 -4.04 -0.02 2.19 16 5 N -0.56 -11.43 2.52 -175.03 -0.44 -11.87 16 6 C 0.25 5.93 4.85 -5.20 -0.03 5.90 16 7 C -0.54 -14.04 9.39 -34.44 -0.32 -14.36 16 8 H 0.06 1.61 7.81 -52.48 -0.41 1.20 16 9 C 0.07 1.74 5.46 -17.82 -0.10 1.65 16 10 N -0.89 -24.51 13.29 55.43 0.74 -23.77 16 11 Si 0.90 20.65 29.54 -169.99 -5.02 15.63 16 12 H -0.27 -6.30 7.11 56.52 0.40 -5.90 16 13 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 14 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 15 C 0.46 9.18 7.39 -154.79 -1.14 8.03 16 16 C -0.27 -5.11 9.33 -39.11 -0.36 -5.47 16 17 C 0.17 2.84 11.29 -17.29 -0.20 2.65 16 18 N -0.57 -10.13 10.40 -11.72 -0.12 -10.25 16 19 C 0.40 7.24 8.18 -91.98 -0.75 6.49 16 20 Cl 0.00 -0.07 29.27 -51.86 -1.52 -1.59 16 21 N -0.58 -11.14 9.20 -10.87 -0.10 -11.24 16 22 H 0.03 0.39 8.14 -51.93 -0.42 -0.03 16 23 H 0.03 0.43 8.14 -51.93 -0.42 0.00 16 24 H 0.08 1.01 8.14 -51.93 -0.42 0.59 16 25 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 26 H 0.05 0.75 8.14 -51.93 -0.42 0.32 16 27 H 0.09 1.61 8.07 -51.93 -0.42 1.19 16 28 H 0.09 1.57 7.33 -51.93 -0.38 1.19 16 29 H 0.06 1.44 7.11 -51.93 -0.37 1.07 16 30 H 0.04 0.90 6.05 -51.93 -0.31 0.59 16 31 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 32 H 0.16 3.03 6.16 -52.49 -0.32 2.71 16 33 H 0.17 2.10 8.06 -52.49 -0.42 1.68 16 LS Contribution 303.72 15.07 4.58 4.58 Total: -1.00 -28.70 303.72 -7.69 -36.39 By element: Atomic # 1 Polarization: 3.26 SS G_CDS: -3.89 Total: -0.63 kcal Atomic # 6 Polarization: 11.20 SS G_CDS: -1.58 Total: 9.62 kcal Atomic # 7 Polarization: -57.20 SS G_CDS: 0.07 Total: -57.13 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -0.34 Total: -6.88 kcal Atomic # 14 Polarization: 20.65 SS G_CDS: -5.02 Total: 15.63 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.52 Total: -1.59 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -28.70 -7.69 -36.39 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000070846720.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.282 kcal (2) G-P(sol) polarization free energy of solvation -28.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.394 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.888 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds