Wall clock time and date at job start Mon Mar 30 2020 05:35:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46900 * 109.47061 * 2 1 4 4 C 1.46903 * 110.99888 * 195.73469 * 3 2 1 5 5 C 1.50695 * 109.47037 * 66.04635 * 4 3 2 6 6 H 1.08005 * 119.99883 * 359.72492 * 5 4 3 7 7 C 1.37881 * 120.00280 * 180.02562 * 5 4 3 8 8 N 1.31519 * 119.99486 * 359.97438 * 7 5 4 9 9 Si 1.86797 * 120.00297 * 179.97438 * 7 5 4 10 10 H 1.48505 * 109.46937 * 59.99817 * 9 7 5 11 11 H 1.48498 * 109.47115 * 179.97438 * 9 7 5 12 12 H 1.48496 * 109.47152 * 299.99747 * 9 7 5 13 13 C 1.37715 * 111.00104 * 71.78380 * 3 2 1 14 14 C 1.37803 * 119.80006 * 60.76429 * 13 3 2 15 15 C 1.40369 * 118.99630 * 179.97438 * 14 13 3 16 16 O 1.22359 * 120.65075 * 179.97438 * 15 14 13 17 17 C 1.46377 * 118.70410 * 0.02562 * 15 14 13 18 18 Cl 1.73595 * 120.23270 * 179.97438 * 17 15 14 19 19 N 1.30425 * 119.53975 * 359.97438 * 17 15 14 20 20 N 1.35739 * 119.79335 * 240.49326 * 13 3 2 21 21 C 1.46498 * 119.30748 * 0.02562 * 20 13 3 22 22 H 1.09000 * 109.47391 * 303.14630 * 1 2 3 23 23 H 1.09004 * 109.47039 * 63.14575 * 1 2 3 24 24 H 1.08994 * 109.47551 * 183.14533 * 1 2 3 25 25 H 1.08998 * 109.47314 * 239.99838 * 2 1 3 26 26 H 1.09001 * 109.47222 * 119.99943 * 2 1 3 27 27 H 1.08998 * 109.47021 * 306.04395 * 4 3 2 28 28 H 1.09006 * 109.47241 * 186.04570 * 4 3 2 29 29 H 0.96997 * 119.99529 * 180.02562 * 8 7 5 30 30 H 1.08007 * 120.49948 * 359.96123 * 14 13 3 31 31 H 1.08995 * 109.47251 * 84.57715 * 21 20 13 32 32 H 1.09005 * 109.47148 * 204.57244 * 21 20 13 33 33 H 1.08996 * 109.47503 * 324.56810 * 21 20 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0196 1.3850 0.0000 4 6 3.4397 1.4413 -0.3719 5 6 3.6014 1.0039 -1.8049 6 1 2.7363 0.7089 -2.3803 7 6 4.8544 0.9743 -2.3796 8 7 5.9084 1.3284 -1.6772 9 14 5.0548 0.4314 -4.1556 10 1 4.2756 1.3345 -5.0402 11 1 6.4903 0.4884 -4.5316 12 1 4.5579 -0.9597 -4.3071 13 6 1.8052 1.9843 1.2212 14 6 2.3897 1.4597 2.3536 15 6 2.1602 2.0843 3.5895 16 8 2.6637 1.6438 4.6141 17 6 1.3060 3.2723 3.6289 18 17 0.9951 4.0757 5.1361 19 7 0.7800 3.7231 2.5239 20 7 1.0239 3.0914 1.3014 21 6 0.4189 3.6319 0.0815 22 1 -0.3634 0.5619 0.8604 23 1 -0.3633 0.4642 -0.9169 24 1 -0.3634 -1.0260 0.0564 25 1 1.8934 -0.5138 -0.8899 26 1 1.8934 -0.5138 0.8900 27 1 4.0118 0.7784 0.2771 28 1 3.8043 2.4625 -0.2604 29 1 6.7898 1.3080 -2.0815 30 1 3.0147 0.5810 2.2910 31 1 -0.5118 3.1044 -0.1269 32 1 0.2121 4.6934 0.2181 33 1 1.1062 3.5003 -0.7541 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000308741751.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:35:20 Heat of formation + Delta-G solvation = 38.662865 kcal Electronic energy + Delta-G solvation = -18969.156187 eV Core-core repulsion = 15865.008730 eV Total energy + Delta-G solvation = -3104.147457 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.71749 -38.20395 -37.04199 -36.65678 -33.17868 -32.80381 -31.43336 -29.99190 -27.04826 -26.55016 -24.28457 -23.00269 -22.76835 -20.61036 -18.24755 -17.67552 -16.73737 -16.14778 -15.88230 -15.12916 -14.92100 -14.27913 -13.96748 -13.83574 -13.74036 -13.45523 -12.72532 -12.52278 -12.44005 -12.37981 -11.78411 -11.77348 -11.45640 -11.28883 -11.24421 -11.01206 -10.82192 -10.67546 -10.32053 -9.78948 -9.55342 -9.29671 -8.69862 -8.09526 -7.83711 -6.25577 -4.31062 0.92931 1.14511 1.22495 2.49133 3.19946 3.26116 3.26833 3.55185 4.10319 4.28694 4.39545 4.60842 5.10370 5.30024 5.37906 5.44104 5.47817 5.53309 5.68905 5.83186 5.95916 5.99152 6.22556 6.32150 6.36221 6.48521 6.87769 6.93545 7.34607 7.45157 7.63375 7.82253 7.91688 8.11934 8.74056 9.34624 10.84592 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.026527 B = 0.005158 C = 0.004923 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1055.272931 B = 5427.445089 C = 5685.881763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.064 3.936 3 N -0.521 5.521 4 C 0.206 3.794 5 C -0.522 4.522 6 H 0.069 0.931 7 C 0.062 3.938 8 N -0.891 5.891 9 Si 0.904 3.096 10 H -0.275 1.275 11 H -0.287 1.287 12 H -0.275 1.275 13 C 0.400 3.600 14 C -0.354 4.354 15 C 0.386 3.614 16 O -0.497 6.497 17 C 0.084 3.916 18 Cl 0.015 6.985 19 N -0.202 5.202 20 N -0.364 5.364 21 C 0.099 3.901 22 H 0.041 0.959 23 H 0.063 0.937 24 H 0.059 0.941 25 H 0.105 0.895 26 H 0.042 0.958 27 H 0.012 0.988 28 H 0.034 0.966 29 H 0.266 0.734 30 H 0.160 0.840 31 H 0.073 0.927 32 H 0.085 0.915 33 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.539 2.830 3.878 12.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.062 4.062 3 N -0.247 5.247 4 C 0.084 3.916 5 C -0.560 4.560 6 H 0.087 0.913 7 C -0.142 4.142 8 N -0.528 5.528 9 Si 0.731 3.269 10 H -0.200 1.200 11 H -0.212 1.212 12 H -0.201 1.201 13 C 0.189 3.811 14 C -0.384 4.384 15 C 0.272 3.728 16 O -0.378 6.378 17 C -0.125 4.125 18 Cl 0.042 6.958 19 N -0.021 5.021 20 N -0.159 5.159 21 C -0.042 4.042 22 H 0.060 0.940 23 H 0.082 0.918 24 H 0.078 0.922 25 H 0.123 0.877 26 H 0.060 0.940 27 H 0.030 0.970 28 H 0.052 0.948 29 H 0.076 0.924 30 H 0.178 0.822 31 H 0.092 0.908 32 H 0.104 0.896 33 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -11.988 3.726 3.719 13.093 hybrid contribution 1.046 -0.983 -0.137 1.442 sum -10.942 2.743 3.582 11.836 Atomic orbital electron populations 1.21863 0.95933 1.01356 1.01579 1.22196 0.94445 0.86336 1.03225 1.58954 1.25395 1.18374 1.21958 1.19943 0.76543 0.98113 0.97044 1.20966 0.93297 1.45916 0.95829 0.91325 1.24986 0.95628 0.95083 0.98481 1.69944 0.98984 1.46950 1.36948 0.86472 0.77158 0.79241 0.84048 1.20043 1.21213 1.20052 1.19730 0.84558 0.84534 0.92266 1.22589 1.14762 1.09880 0.91162 1.18413 0.80759 0.82948 0.90632 1.90850 1.47365 1.63694 1.35848 1.26888 0.99776 0.96985 0.88869 1.98407 1.94348 1.78553 1.24475 1.74786 1.17251 1.18852 0.91163 1.47743 1.41425 1.22276 1.04471 1.22088 0.99550 0.99652 0.82932 0.94029 0.91837 0.92173 0.87680 0.94018 0.96997 0.94761 0.92384 0.82236 0.90803 0.89643 0.87133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.96 10.01 37.16 0.37 -1.59 16 2 C 0.06 1.04 5.42 -3.82 -0.02 1.02 16 3 N -0.52 -9.49 3.17 -174.43 -0.55 -10.04 16 4 C 0.21 4.71 4.32 -4.98 -0.02 4.69 16 5 C -0.52 -12.80 8.29 -34.44 -0.29 -13.08 16 6 H 0.07 1.62 7.24 -52.48 -0.38 1.24 16 7 C 0.06 1.58 5.46 -17.82 -0.10 1.49 16 8 N -0.89 -24.58 13.29 55.43 0.74 -23.85 16 9 Si 0.90 19.78 29.54 -169.99 -5.02 14.76 16 10 H -0.27 -5.93 7.11 56.52 0.40 -5.52 16 11 H -0.29 -6.34 7.11 56.52 0.40 -5.94 16 12 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 13 C 0.40 7.03 4.54 -153.81 -0.70 6.33 16 14 C -0.35 -6.65 8.42 -38.94 -0.33 -6.98 16 15 C 0.39 7.37 6.90 -35.51 -0.24 7.12 16 16 O -0.50 -10.56 17.54 4.59 0.08 -10.48 16 17 C 0.08 1.40 7.61 -14.88 -0.11 1.29 16 18 Cl 0.01 0.21 28.87 -51.86 -1.50 -1.29 16 19 N -0.20 -3.19 11.49 34.23 0.39 -2.80 16 20 N -0.36 -5.70 3.93 -67.09 -0.26 -5.96 16 21 C 0.10 1.20 10.56 59.85 0.63 1.83 16 22 H 0.04 0.56 7.50 -51.93 -0.39 0.17 16 23 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 24 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 25 H 0.10 1.83 6.58 -51.93 -0.34 1.48 16 26 H 0.04 0.68 6.77 -51.93 -0.35 0.33 16 27 H 0.01 0.30 7.56 -51.93 -0.39 -0.09 16 28 H 0.03 0.87 8.05 -51.93 -0.42 0.45 16 29 H 0.27 7.02 8.31 -40.82 -0.34 6.68 16 30 H 0.16 3.09 7.05 -52.48 -0.37 2.72 16 31 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 32 H 0.08 0.86 8.14 -51.93 -0.42 0.44 16 33 H 0.11 1.48 7.44 -51.93 -0.39 1.09 16 LS Contribution 299.74 15.07 4.52 4.52 Total: -1.00 -28.25 299.74 -6.27 -34.52 By element: Atomic # 1 Polarization: 2.38 SS G_CDS: -3.85 Total: -1.48 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -0.81 Total: 2.11 kcal Atomic # 7 Polarization: -42.96 SS G_CDS: 0.31 Total: -42.65 kcal Atomic # 8 Polarization: -10.56 SS G_CDS: 0.08 Total: -10.48 kcal Atomic # 14 Polarization: 19.78 SS G_CDS: -5.02 Total: 14.76 kcal Atomic # 17 Polarization: 0.21 SS G_CDS: -1.50 Total: -1.29 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -28.25 -6.27 -34.52 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000308741751.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.182 kcal (2) G-P(sol) polarization free energy of solvation -28.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.519 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds