Wall clock time and date at job start Mon Mar 30 2020 05:35:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34944 * 126.02735 * 2 1 4 4 C 1.35306 * 107.76573 * 179.89872 * 3 2 1 5 5 C 1.50701 * 126.04855 * 180.13324 * 4 3 2 6 6 C 1.50704 * 109.46672 * 100.24607 * 5 4 3 7 7 O 1.21273 * 120.00193 * 0.02562 * 6 5 4 8 8 N 1.34778 * 119.99618 * 180.02562 * 6 5 4 9 9 C 1.46503 * 119.99902 * 179.97438 * 8 6 5 10 10 C 1.52999 * 109.47281 * 179.97438 * 9 8 6 11 11 C 1.50695 * 109.47120 * 180.02562 * 10 9 8 12 12 H 1.07999 * 120.00001 * 0.02562 * 11 10 9 13 13 C 1.37884 * 119.99928 * 180.02562 * 11 10 9 14 14 N 1.31512 * 120.00031 * 359.97438 * 13 11 10 15 15 Si 1.86797 * 119.99861 * 179.97438 * 13 11 10 16 16 H 1.48498 * 109.47216 * 359.97438 * 15 13 11 17 17 H 1.48506 * 109.46938 * 119.99863 * 15 13 11 18 18 H 1.48500 * 109.47114 * 239.99856 * 15 13 11 19 19 C 1.39966 * 107.90630 * 0.36968 * 4 3 2 20 20 Cl 1.73607 * 125.90936 * 179.77327 * 19 4 3 21 21 N 1.30891 * 108.17810 * 359.76805 * 19 4 3 22 22 H 1.09001 * 109.47060 * 269.71732 * 1 2 3 23 23 H 1.09004 * 109.47073 * 29.71221 * 1 2 3 24 24 H 1.09000 * 109.47212 * 149.71304 * 1 2 3 25 25 H 1.07997 * 126.11654 * 0.03655 * 3 2 1 26 26 H 1.08994 * 109.47690 * 220.24573 * 5 4 3 27 27 H 1.09001 * 109.47004 * 340.24895 * 5 4 3 28 28 H 0.96996 * 120.00144 * 359.97438 * 8 6 5 29 29 H 1.09000 * 109.47329 * 300.00226 * 9 8 6 30 30 H 1.09001 * 109.47003 * 59.99963 * 9 8 6 31 31 H 1.09000 * 109.47413 * 300.00529 * 10 9 8 32 32 H 1.09001 * 109.46843 * 60.00219 * 10 9 8 33 33 H 0.96995 * 120.00005 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2588 1.0913 0.0000 4 6 3.5437 0.6674 0.0023 5 6 4.7676 1.5465 0.0059 6 6 5.3200 1.6326 1.4055 7 8 4.7739 1.0383 2.3106 8 7 6.4209 2.3702 1.6512 9 6 6.9576 2.4544 3.0118 10 6 8.2003 3.3469 3.0156 11 6 8.7527 3.4330 4.4150 12 1 8.2663 2.9037 5.2210 13 6 9.8790 4.1875 4.6664 14 7 10.4716 4.8316 3.6848 15 14 10.5633 4.2947 6.4012 16 1 9.7197 3.4854 7.3169 17 1 11.9538 3.7735 6.4179 18 1 10.5601 5.7109 6.8479 19 6 3.5350 -0.7323 -0.0049 20 17 4.9348 -1.7591 -0.0108 21 7 2.2889 -1.1329 -0.0062 22 1 -0.3633 -0.0051 1.0277 23 1 -0.3633 0.8926 -0.5094 24 1 -0.3634 -0.8874 -0.5183 25 1 1.9276 2.1193 0.0006 26 1 5.5218 1.1223 -0.6568 27 1 4.4992 2.5445 -0.3408 28 1 6.8579 2.8453 0.9272 29 1 6.2032 2.8786 3.6744 30 1 7.2262 1.4567 3.3587 31 1 8.9546 2.9224 2.3530 32 1 7.9320 4.3447 2.6684 33 1 11.2642 5.3620 3.8615 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000814414488.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:35:41 Heat of formation + Delta-G solvation = 24.155445 kcal Electronic energy + Delta-G solvation = -17698.523053 eV Core-core repulsion = 14593.746507 eV Total energy + Delta-G solvation = -3104.776546 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.47266 -38.96761 -36.74333 -34.80937 -33.64361 -32.80747 -31.96168 -29.76416 -28.31044 -26.04503 -24.40830 -21.42955 -21.30321 -20.69627 -19.80141 -17.17330 -16.76581 -16.23541 -15.62973 -15.26425 -15.14223 -14.85844 -14.42418 -13.92245 -13.56365 -13.43833 -13.11781 -12.87680 -12.62426 -12.25703 -11.84013 -11.70743 -11.53411 -11.16104 -11.02246 -10.61680 -10.57619 -10.28578 -9.74185 -9.46947 -9.36474 -9.16163 -8.53221 -8.49316 -8.28946 -6.07689 -4.10032 1.42862 1.59731 2.38903 2.73832 3.13833 3.29559 3.37116 3.42435 3.89778 4.28952 4.44460 4.56933 4.83302 4.91570 5.06670 5.09811 5.29499 5.37030 5.43852 5.52808 5.83045 6.07310 6.40715 6.41603 6.70191 6.79598 7.01467 7.29997 7.55684 7.65520 7.91401 8.11763 8.31510 8.78122 8.96596 9.54726 11.03977 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.034115 B = 0.003332 C = 0.003225 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 820.549496 B = 8400.762276 C = 8679.851717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.104 3.896 2 N -0.366 5.366 3 C 0.075 3.925 4 C -0.197 4.197 5 C -0.067 4.067 6 C 0.505 3.495 7 O -0.541 6.541 8 N -0.725 5.725 9 C 0.123 3.877 10 C 0.012 3.988 11 C -0.520 4.520 12 H 0.059 0.941 13 C 0.058 3.942 14 N -0.894 5.894 15 Si 0.896 3.104 16 H -0.271 1.271 17 H -0.283 1.283 18 H -0.284 1.284 19 C 0.143 3.857 20 Cl 0.007 6.993 21 N -0.285 5.285 22 H 0.078 0.922 23 H 0.091 0.909 24 H 0.090 0.910 25 H 0.182 0.818 26 H 0.101 0.899 27 H 0.101 0.899 28 H 0.397 0.603 29 H 0.054 0.946 30 H 0.055 0.945 31 H 0.022 0.978 32 H 0.022 0.978 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.638 -6.403 -12.689 22.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.037 4.037 2 N -0.149 5.149 3 C -0.071 4.071 4 C -0.210 4.210 5 C -0.108 4.108 6 C 0.290 3.710 7 O -0.418 6.418 8 N -0.376 5.376 9 C 0.001 3.999 10 C -0.025 4.025 11 C -0.559 4.559 12 H 0.078 0.922 13 C -0.143 4.143 14 N -0.533 5.533 15 Si 0.723 3.277 16 H -0.196 1.196 17 H -0.209 1.209 18 H -0.210 1.210 19 C -0.049 4.049 20 Cl 0.035 6.965 21 N -0.111 5.111 22 H 0.096 0.904 23 H 0.109 0.891 24 H 0.109 0.891 25 H 0.199 0.801 26 H 0.119 0.881 27 H 0.119 0.881 28 H 0.230 0.770 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.041 0.959 32 H 0.040 0.960 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -18.705 -7.811 -12.046 23.579 hybrid contribution 1.319 0.990 0.634 1.767 sum -17.386 -6.821 -11.412 21.887 Atomic orbital electron populations 1.21921 0.73355 1.04624 1.03794 1.48144 1.06509 1.03110 1.57177 1.22281 0.89832 0.93712 1.01278 1.19247 0.94399 0.91549 1.15782 1.19976 0.94832 1.00035 0.95950 1.20493 0.80791 0.79281 0.90465 1.90678 1.59523 1.45090 1.46544 1.46315 1.28543 1.50098 1.12613 1.21674 0.97095 1.00747 0.80421 1.19323 0.90787 0.94326 0.98075 1.21108 1.11125 1.29813 0.93830 0.92244 1.24996 0.96692 0.95354 0.97283 1.69961 1.20482 1.31519 1.31385 0.86473 0.78888 0.77814 0.84497 1.19588 1.20938 1.20964 1.22467 0.89092 0.90754 1.02592 1.98396 1.34081 1.67164 1.96837 1.77318 0.99959 1.08139 1.25683 0.90393 0.89071 0.89133 0.80073 0.88115 0.88087 0.76979 0.92779 0.92709 0.95929 0.95975 0.92932 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.61 11.47 59.85 0.69 1.29 16 2 N -0.37 -4.04 4.01 -68.16 -0.27 -4.31 16 3 C 0.07 0.79 11.40 -17.23 -0.20 0.60 16 4 C -0.20 -2.59 4.60 -105.02 -0.48 -3.07 16 5 C -0.07 -0.80 6.04 -29.03 -0.18 -0.97 16 6 C 0.50 8.44 7.82 -10.98 -0.09 8.36 16 7 O -0.54 -11.32 16.03 5.56 0.09 -11.23 16 8 N -0.73 -12.47 5.56 -60.29 -0.33 -12.81 16 9 C 0.12 2.64 5.61 -4.04 -0.02 2.61 16 10 C 0.01 0.30 5.09 -27.89 -0.14 0.16 16 11 C -0.52 -14.51 9.11 -34.44 -0.31 -14.82 16 12 H 0.06 1.64 7.74 -52.49 -0.41 1.23 16 13 C 0.06 1.64 5.46 -17.82 -0.10 1.55 16 14 N -0.89 -26.15 13.29 55.43 0.74 -25.41 16 15 Si 0.90 21.48 29.54 -169.99 -5.02 16.46 16 16 H -0.27 -6.42 7.11 56.52 0.40 -6.02 16 17 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 18 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 19 C 0.14 2.10 7.84 -17.31 -0.14 1.97 16 20 Cl 0.01 0.11 29.16 -51.86 -1.51 -1.41 16 21 N -0.29 -4.13 12.58 32.94 0.41 -3.71 16 22 H 0.08 0.41 8.14 -51.93 -0.42 -0.01 16 23 H 0.09 0.25 8.14 -51.93 -0.42 -0.17 16 24 H 0.09 0.46 8.14 -51.93 -0.42 0.04 16 25 H 0.18 1.20 8.06 -52.49 -0.42 0.77 16 26 H 0.10 1.06 8.14 -51.93 -0.42 0.63 16 27 H 0.10 0.88 8.14 -51.93 -0.42 0.45 16 28 H 0.40 5.76 8.47 -40.82 -0.35 5.41 16 29 H 0.05 1.21 8.14 -51.93 -0.42 0.78 16 30 H 0.05 1.24 8.14 -51.93 -0.42 0.82 16 31 H 0.02 0.58 8.14 -51.93 -0.42 0.16 16 32 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 33 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 LS Contribution 311.77 15.07 4.70 4.70 Total: -1.00 -35.31 311.77 -6.28 -41.59 By element: Atomic # 1 Polarization: 2.58 SS G_CDS: -4.11 Total: -1.54 kcal Atomic # 6 Polarization: -1.36 SS G_CDS: -0.96 Total: -2.33 kcal Atomic # 7 Polarization: -46.79 SS G_CDS: 0.54 Total: -46.24 kcal Atomic # 8 Polarization: -11.32 SS G_CDS: 0.09 Total: -11.23 kcal Atomic # 14 Polarization: 21.48 SS G_CDS: -5.02 Total: 16.46 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.51 Total: -1.41 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -35.31 -6.28 -41.59 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000814414488.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.747 kcal (2) G-P(sol) polarization free energy of solvation -35.309 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.591 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds