Wall clock time and date at job start Mon Mar 30 2020 05:35:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.46503 * 119.99861 * 2 1 4 4 C 1.50706 * 109.46974 * 270.00241 * 3 2 1 5 5 H 1.07999 * 120.00065 * 359.97438 * 4 3 2 6 6 C 1.37871 * 119.99998 * 180.02562 * 4 3 2 7 7 N 1.31512 * 120.00167 * 179.97438 * 6 4 3 8 8 Si 1.86809 * 120.00098 * 0.02562 * 6 4 3 9 9 H 1.48497 * 109.46927 * 89.99786 * 8 6 4 10 10 H 1.48496 * 109.46838 * 209.99990 * 8 6 4 11 11 H 1.48499 * 109.46945 * 330.00017 * 8 6 4 12 12 C 1.34778 * 120.00237 * 180.02562 * 2 1 3 13 13 O 1.21273 * 120.00188 * 179.97438 * 12 2 1 14 14 C 1.50704 * 119.99618 * 359.97438 * 12 2 1 15 15 C 1.50701 * 109.46672 * 180.02562 * 14 12 2 16 16 C 1.35306 * 126.04855 * 100.24607 * 15 14 12 17 17 N 1.34944 * 107.76573 * 180.13324 * 16 15 14 18 18 C 1.46506 * 126.02735 * 179.89872 * 17 16 15 19 19 N 1.40081 * 107.94720 * 359.63312 * 17 16 15 20 20 C 1.30891 * 108.20126 * 0.22504 * 19 17 16 21 21 Cl 1.73607 * 125.91253 * 179.97438 * 20 19 17 22 22 H 1.09009 * 109.46917 * 270.00014 * 1 2 3 23 23 H 1.08992 * 109.47373 * 29.99582 * 1 2 3 24 24 H 1.08998 * 109.47195 * 150.00610 * 1 2 3 25 25 H 1.08994 * 109.47339 * 30.00144 * 3 2 1 26 26 H 1.08997 * 109.47148 * 150.00728 * 3 2 1 27 27 H 0.97001 * 120.00175 * 180.02562 * 7 6 4 28 28 H 1.08994 * 109.47035 * 59.99996 * 14 12 2 29 29 H 1.09001 * 109.47171 * 299.99973 * 14 12 2 30 30 H 1.07997 * 126.11757 * 359.97438 * 16 15 14 31 31 H 1.09001 * 109.47060 * 269.71732 * 18 17 16 32 32 H 1.09004 * 109.47073 * 29.71221 * 18 17 16 33 33 H 1.09000 * 109.47212 * 149.71304 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4486 1.7038 -1.4209 5 1 2.0980 1.0958 -2.2417 6 6 3.1267 2.8775 -1.6728 7 7 3.3463 3.2569 -2.9128 8 14 3.7350 3.9281 -0.2530 9 1 5.1083 3.5058 0.1223 10 1 3.7508 5.3548 -0.6643 11 1 2.8294 3.7586 0.9116 12 6 2.1389 -1.1672 -0.0005 13 8 3.3517 -1.1672 -0.0010 14 6 1.3854 -2.4723 -0.0005 15 6 2.3647 -3.6177 -0.0005 16 6 2.7343 -4.3493 1.0760 17 7 3.6264 -5.2723 0.6600 18 6 4.2865 -6.2735 1.5016 19 7 3.8055 -5.1084 -0.7196 20 6 3.0488 -4.1163 -1.1151 21 17 2.9171 -3.5214 -2.7408 22 1 -0.3633 0.0000 1.0278 23 1 -0.3634 0.8899 -0.5137 24 1 -0.3633 -0.8900 -0.5137 25 1 1.6084 2.0284 0.5138 26 1 3.1499 1.1384 0.5137 27 1 3.8238 4.0824 -3.0900 28 1 0.7584 -2.5298 -0.8902 29 1 0.7591 -2.5302 0.8897 30 1 2.3806 -4.2165 2.0878 31 1 5.2197 -5.8644 1.8888 32 1 3.6329 -6.5372 2.3331 33 1 4.4981 -7.1637 0.9093 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000814621244.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:35:44 Heat of formation + Delta-G solvation = 47.212951 kcal Electronic energy + Delta-G solvation = -18502.067798 eV Core-core repulsion = 15398.291101 eV Total energy + Delta-G solvation = -3103.776697 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.28668 -38.80831 -36.48483 -34.82591 -33.49831 -32.51591 -31.70293 -29.01100 -27.81604 -26.05023 -25.34833 -22.33034 -21.23880 -20.48364 -18.40064 -16.92878 -16.86444 -16.36024 -15.50782 -15.21776 -14.98237 -14.80017 -13.98483 -13.61855 -13.33973 -13.24262 -12.75507 -12.59526 -12.38150 -12.21637 -11.93404 -11.62111 -11.47124 -11.40335 -11.29713 -10.83443 -10.48410 -10.35022 -10.09067 -9.47378 -9.21708 -8.97512 -8.52878 -8.31679 -7.60274 -6.02396 -4.00397 1.64390 1.77756 2.58871 2.93617 3.32950 3.38861 3.40662 3.47999 4.03923 4.43582 4.44863 4.70991 4.94871 5.11923 5.18674 5.23897 5.27771 5.40434 5.56555 5.68762 5.72097 5.89384 6.05364 6.22482 6.26083 6.76480 6.87681 7.01944 7.43280 7.48416 7.68148 8.35304 8.54498 9.01523 9.11604 9.58353 11.11192 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.023545 B = 0.005190 C = 0.004984 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1188.914512 B = 5393.792363 C = 5616.651198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.083 3.917 2 N -0.601 5.601 3 C 0.216 3.784 4 C -0.525 4.525 5 H 0.075 0.925 6 C 0.072 3.928 7 N -0.899 5.899 8 Si 0.875 3.125 9 H -0.274 1.274 10 H -0.286 1.286 11 H -0.266 1.266 12 C 0.508 3.492 13 O -0.530 6.530 14 C -0.064 4.064 15 C -0.194 4.194 16 C 0.071 3.929 17 N -0.368 5.368 18 C 0.105 3.895 19 N -0.287 5.287 20 C 0.144 3.856 21 Cl 0.013 6.987 22 H 0.044 0.956 23 H 0.075 0.925 24 H 0.061 0.939 25 H 0.028 0.972 26 H 0.035 0.965 27 H 0.264 0.736 28 H 0.098 0.902 29 H 0.095 0.905 30 H 0.180 0.820 31 H 0.076 0.924 32 H 0.089 0.911 33 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.947 -17.214 10.451 20.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.334 5.334 3 C 0.096 3.904 4 C -0.564 4.564 5 H 0.093 0.907 6 C -0.130 4.130 7 N -0.537 5.537 8 Si 0.703 3.297 9 H -0.200 1.200 10 H -0.211 1.211 11 H -0.191 1.191 12 C 0.294 3.706 13 O -0.406 6.406 14 C -0.105 4.105 15 C -0.206 4.206 16 C -0.075 4.075 17 N -0.152 5.152 18 C -0.036 4.036 19 N -0.112 5.112 20 C -0.048 4.048 21 Cl 0.041 6.959 22 H 0.062 0.938 23 H 0.093 0.907 24 H 0.079 0.921 25 H 0.046 0.954 26 H 0.053 0.947 27 H 0.073 0.927 28 H 0.116 0.884 29 H 0.113 0.887 30 H 0.197 0.803 31 H 0.095 0.905 32 H 0.108 0.892 33 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -4.310 -17.989 9.946 21.002 hybrid contribution -0.203 1.377 0.666 1.543 sum -4.514 -16.611 10.613 20.222 Atomic orbital electron populations 1.21659 0.81092 1.03039 1.00300 1.47831 1.06157 1.07062 1.72374 1.19627 0.92383 0.80140 0.98279 1.21354 1.36698 1.06961 0.91374 0.90697 1.24856 0.95319 0.97390 0.95477 1.69901 1.41629 1.23577 1.18623 0.86863 0.80107 0.79734 0.83042 1.20009 1.21145 1.19101 1.20273 0.88192 0.84758 0.77406 1.90673 1.13850 1.87036 1.49085 1.20012 0.96324 0.89945 1.04261 1.19309 1.07312 1.02844 0.91176 1.22216 0.93892 0.91728 0.99655 1.48117 1.34232 1.27498 1.05365 1.21881 0.98024 0.90484 0.93172 1.77314 1.23054 1.20428 0.90426 1.22527 0.97572 0.95535 0.89147 1.98416 1.96676 1.85549 1.15276 0.93775 0.90660 0.92076 0.95390 0.94710 0.92657 0.88358 0.88666 0.80276 0.90525 0.89241 0.89229 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.24 10.24 59.85 0.61 1.86 16 2 N -0.60 -12.41 2.86 -182.95 -0.52 -12.93 16 3 C 0.22 5.37 4.23 -5.19 -0.02 5.35 16 4 C -0.53 -15.36 9.94 -34.44 -0.34 -15.70 16 5 H 0.07 2.40 8.06 -52.49 -0.42 1.98 16 6 C 0.07 2.12 5.47 -17.82 -0.10 2.03 16 7 N -0.90 -28.21 13.96 55.43 0.77 -27.44 16 8 Si 0.88 21.94 27.47 -169.99 -4.67 17.27 16 9 H -0.27 -6.95 7.11 56.52 0.40 -6.55 16 10 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 11 H -0.27 -6.25 6.54 56.52 0.37 -5.88 16 12 C 0.51 10.38 7.67 -10.98 -0.08 10.29 16 13 O -0.53 -13.34 15.61 5.56 0.09 -13.25 16 14 C -0.06 -0.94 4.59 -29.03 -0.13 -1.08 16 15 C -0.19 -3.01 4.60 -105.02 -0.48 -3.49 16 16 C 0.07 0.88 11.40 -17.23 -0.20 0.68 16 17 N -0.37 -4.72 4.01 -68.16 -0.27 -4.99 16 18 C 0.11 0.76 11.47 59.85 0.69 1.45 16 19 N -0.29 -4.76 12.58 32.94 0.41 -4.35 16 20 C 0.14 2.50 7.84 -17.31 -0.14 2.37 16 21 Cl 0.01 0.23 29.16 -51.86 -1.51 -1.28 16 22 H 0.04 0.53 8.14 -51.92 -0.42 0.11 16 23 H 0.07 1.19 8.07 -51.93 -0.42 0.77 16 24 H 0.06 0.75 6.44 -51.93 -0.33 0.41 16 25 H 0.03 0.66 7.13 -51.93 -0.37 0.29 16 26 H 0.03 0.93 6.85 -51.93 -0.36 0.57 16 27 H 0.26 7.73 8.31 -40.82 -0.34 7.39 16 28 H 0.10 1.34 7.40 -51.93 -0.38 0.96 16 29 H 0.10 1.03 8.10 -51.93 -0.42 0.61 16 30 H 0.18 1.45 8.06 -52.49 -0.42 1.03 16 31 H 0.08 0.51 8.14 -51.93 -0.42 0.09 16 32 H 0.09 0.36 8.14 -51.93 -0.42 -0.07 16 33 H 0.09 0.58 8.14 -51.93 -0.42 0.16 16 LS Contribution 304.83 15.07 4.59 4.59 Total: -1.00 -38.08 304.83 -5.29 -43.37 By element: Atomic # 1 Polarization: -0.75 SS G_CDS: -3.99 Total: -4.74 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: -0.19 Total: 3.75 kcal Atomic # 7 Polarization: -50.11 SS G_CDS: 0.39 Total: -49.72 kcal Atomic # 8 Polarization: -13.34 SS G_CDS: 0.09 Total: -13.25 kcal Atomic # 14 Polarization: 21.94 SS G_CDS: -4.67 Total: 17.27 kcal Atomic # 17 Polarization: 0.23 SS G_CDS: -1.51 Total: -1.28 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -38.08 -5.29 -43.37 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000814621244.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.581 kcal (2) G-P(sol) polarization free energy of solvation -38.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.368 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds