Wall clock time and date at job start Mon Mar 30 2020 05:29:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30830 * 125.89321 * 2 1 4 4 N 1.40084 * 108.23819 * 180.25407 * 3 2 1 5 5 C 1.46497 * 126.03495 * 179.75528 * 4 3 2 6 6 C 1.34987 * 107.92541 * 359.71988 * 4 3 2 7 7 Cl 1.73595 * 126.14065 * 179.97438 * 6 4 3 8 8 C 1.35460 * 107.71603 * 359.97438 * 6 4 3 9 9 C 1.50703 * 126.04950 * 180.02562 * 8 6 4 10 10 N 1.46505 * 109.47064 * 90.02405 * 9 8 6 11 11 C 1.46493 * 119.99899 * 270.00279 * 10 9 8 12 12 C 1.34773 * 119.99455 * 90.00114 * 10 9 8 13 13 O 1.21684 * 120.00459 * 359.97438 * 12 10 9 14 14 C 1.46381 * 119.99490 * 180.02562 * 12 10 9 15 15 H 1.07995 * 120.00404 * 359.97438 * 14 12 10 16 16 C 1.40052 * 119.99780 * 180.02562 * 14 12 10 17 17 N 1.30671 * 120.00354 * 359.97438 * 16 14 12 18 18 Si 1.86797 * 119.99792 * 180.02562 * 16 14 12 19 19 H 1.48502 * 109.47432 * 89.99869 * 18 16 14 20 20 H 1.48506 * 109.46890 * 209.99708 * 18 16 14 21 21 H 1.48506 * 109.47320 * 329.99547 * 18 16 14 22 22 H 1.09000 * 109.47348 * 270.21977 * 1 2 3 23 23 H 1.09003 * 109.46950 * 30.21097 * 1 2 3 24 24 H 1.08999 * 109.47619 * 150.21141 * 1 2 3 25 25 H 1.09001 * 109.46612 * 269.95763 * 5 4 3 26 26 H 1.08995 * 109.47202 * 29.95768 * 5 4 3 27 27 H 1.08997 * 109.46707 * 149.96202 * 5 4 3 28 28 H 1.09002 * 109.47152 * 330.02488 * 9 8 6 29 29 H 1.09001 * 109.46980 * 210.02588 * 9 8 6 30 30 H 1.08994 * 109.47405 * 90.00269 * 11 10 9 31 31 H 1.09006 * 109.46911 * 209.99921 * 11 10 9 32 32 H 1.08996 * 109.47170 * 329.99434 * 11 10 9 33 33 H 0.97000 * 120.00575 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2740 1.0599 0.0000 4 7 3.6089 0.6350 -0.0059 5 6 4.7894 1.5025 -0.0129 6 6 3.6153 -0.7148 -0.0032 7 17 5.0220 -1.7320 -0.0088 8 6 2.3269 -1.1331 0.0048 9 6 1.8597 -2.5659 0.0109 10 7 1.7151 -3.0265 1.3941 11 6 2.8491 -3.6501 2.0807 12 6 0.5390 -2.8765 2.0348 13 8 -0.4027 -2.3580 1.4647 14 6 0.3947 -3.3362 3.4170 15 1 1.2306 -3.7960 3.9233 16 6 -0.8276 -3.1808 4.0827 17 7 -1.8392 -2.6250 3.4701 18 14 -1.0115 -3.7669 5.8468 19 1 -0.6497 -2.6653 6.7747 20 1 -2.4186 -4.1756 6.0885 21 1 -0.1124 -4.9257 6.0798 22 1 -0.3634 0.0039 1.0276 23 1 -0.3633 0.8881 -0.5171 24 1 -0.3634 -0.8918 -0.5105 25 1 5.0775 1.7155 -1.0424 26 1 4.5575 2.4358 0.5000 27 1 5.6114 1.0015 0.4982 28 1 2.5906 -3.1886 -0.5049 29 1 0.8983 -2.6367 -0.4980 30 1 3.4323 -2.8828 2.5896 31 1 2.4801 -4.3703 2.8111 32 1 3.4783 -4.1615 1.3523 33 1 -2.6857 -2.5170 3.9313 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000846025679.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:29:32 Heat of formation + Delta-G solvation = 39.790276 kcal Electronic energy + Delta-G solvation = -19149.342348 eV Core-core repulsion = 16045.243779 eV Total energy + Delta-G solvation = -3104.098569 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.98913 -37.51566 -36.70545 -34.21367 -33.37171 -32.37238 -30.45182 -29.21569 -27.07931 -25.91014 -25.05634 -23.60294 -20.64008 -19.61200 -18.87032 -16.64304 -16.32717 -15.66145 -15.50717 -14.53730 -14.31565 -14.24799 -13.89939 -13.12647 -13.01519 -12.49473 -12.34797 -12.28279 -12.10358 -11.72321 -11.50966 -11.33010 -11.32499 -11.18025 -11.09043 -10.97348 -10.76736 -10.24555 -10.12332 -10.01020 -8.80770 -8.74383 -8.17773 -7.43223 -7.13154 -6.13980 -4.57905 1.67556 1.93429 2.87760 3.03300 3.16143 3.23596 3.26092 4.14708 4.57868 4.64855 4.84385 5.11837 5.26187 5.35876 5.53363 5.60803 5.79085 6.03035 6.11731 6.22513 6.43148 6.44645 6.57377 6.62404 6.67258 6.75105 6.98907 7.22703 7.49545 7.69054 7.96174 8.20966 8.42314 9.08127 9.50536 10.63385 10.83098 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.023885 B = 0.006205 C = 0.005586 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1171.980951 B = 4511.504494 C = 5011.570354 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 C 0.115 3.885 3 N -0.290 5.290 4 N -0.380 5.380 5 C 0.103 3.897 6 C 0.121 3.879 7 Cl -0.017 7.017 8 C -0.204 4.204 9 C 0.198 3.802 10 N -0.640 5.640 11 C 0.106 3.894 12 C 0.559 3.441 13 O -0.569 6.569 14 C -0.543 4.543 15 H 0.069 0.931 16 C 0.090 3.910 17 N -0.766 5.766 18 Si 0.902 3.098 19 H -0.274 1.274 20 H -0.280 1.280 21 H -0.266 1.266 22 H 0.095 0.905 23 H 0.054 0.946 24 H 0.087 0.913 25 H 0.072 0.928 26 H 0.090 0.910 27 H 0.083 0.917 28 H 0.060 0.940 29 H 0.085 0.915 30 H 0.026 0.974 31 H 0.070 0.930 32 H 0.039 0.961 33 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.092 3.047 -5.963 13.822 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.051 4.051 3 N -0.114 5.114 4 N -0.165 5.165 5 C -0.038 4.038 6 C -0.032 4.032 7 Cl 0.011 6.989 8 C -0.218 4.218 9 C 0.073 3.927 10 N -0.377 5.377 11 C -0.039 4.039 12 C 0.364 3.636 13 O -0.451 6.451 14 C -0.580 4.580 15 H 0.087 0.913 16 C -0.130 4.130 17 N -0.395 5.395 18 Si 0.727 3.273 19 H -0.199 1.199 20 H -0.205 1.205 21 H -0.190 1.190 22 H 0.113 0.887 23 H 0.073 0.927 24 H 0.106 0.894 25 H 0.091 0.909 26 H 0.108 0.892 27 H 0.101 0.899 28 H 0.078 0.922 29 H 0.103 0.897 30 H 0.044 0.956 31 H 0.089 0.911 32 H 0.058 0.942 33 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 11.674 4.638 -6.265 14.038 hybrid contribution 0.553 -1.113 1.093 1.656 sum 12.227 3.525 -5.172 13.736 Atomic orbital electron populations 1.20248 0.84814 1.02014 1.04923 1.22383 0.97668 0.89174 0.95891 1.77453 0.84807 1.21919 1.27200 1.48397 1.06217 1.02555 1.59328 1.21782 0.84005 0.94940 1.03084 1.21386 0.89721 0.83640 1.08417 1.98358 1.38702 1.64717 1.97172 1.20435 0.89056 0.99161 1.13160 1.19295 1.00570 0.86652 0.86192 1.48011 1.13110 1.64568 1.12057 1.21355 0.89112 0.96738 0.96653 1.18179 0.79650 0.78823 0.86918 1.90551 1.38412 1.47828 1.68298 1.21009 0.98017 1.42101 0.96824 0.91288 1.25673 0.95341 0.93236 0.98722 1.69998 1.01508 1.31942 1.36080 0.86469 0.77956 0.79591 0.83307 1.19919 1.20521 1.18989 0.88689 0.92662 0.89438 0.90939 0.89156 0.89865 0.92167 0.89681 0.95585 0.91142 0.94219 0.92269 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -1.23 8.85 36.01 0.32 -0.91 16 2 C 0.11 2.32 7.22 -82.41 -0.59 1.73 16 3 N -0.29 -5.59 12.57 33.67 0.42 -5.16 16 4 N -0.38 -6.26 4.01 -64.91 -0.26 -6.52 16 5 C 0.10 1.14 11.31 59.85 0.68 1.82 16 6 C 0.12 2.06 7.45 -17.16 -0.13 1.93 16 7 Cl -0.02 -0.24 28.34 -51.86 -1.47 -1.70 16 8 C -0.20 -3.97 5.69 -105.00 -0.60 -4.56 16 9 C 0.20 3.91 5.58 -5.19 -0.03 3.88 16 10 N -0.64 -14.38 2.86 -184.63 -0.53 -14.91 16 11 C 0.11 2.01 10.19 59.84 0.61 2.62 16 12 C 0.56 15.25 7.61 -12.99 -0.10 15.15 16 13 O -0.57 -16.69 11.66 5.20 0.06 -16.63 16 14 C -0.54 -14.98 8.74 -35.63 -0.31 -15.29 16 15 H 0.07 1.78 6.00 -52.49 -0.31 1.46 16 16 C 0.09 2.45 5.50 -17.37 -0.10 2.36 16 17 N -0.77 -22.20 11.83 55.55 0.66 -21.55 16 18 Si 0.90 20.02 29.56 -169.99 -5.02 15.00 16 19 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 20 H -0.28 -6.09 7.11 56.52 0.40 -5.69 16 21 H -0.27 -5.72 7.11 56.52 0.40 -5.32 16 22 H 0.09 2.22 7.36 -51.93 -0.38 1.83 16 23 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 24 H 0.09 1.78 6.68 -51.93 -0.35 1.44 16 25 H 0.07 0.66 8.14 -51.93 -0.42 0.23 16 26 H 0.09 0.91 8.14 -51.93 -0.42 0.48 16 27 H 0.08 0.77 7.81 -51.93 -0.41 0.37 16 28 H 0.06 1.02 7.66 -51.93 -0.40 0.63 16 29 H 0.08 1.78 6.53 -51.93 -0.34 1.44 16 30 H 0.03 0.49 8.14 -51.93 -0.42 0.06 16 31 H 0.07 1.37 6.09 -51.93 -0.32 1.06 16 32 H 0.04 0.63 7.89 -51.93 -0.41 0.22 16 33 H 0.27 7.08 8.29 -40.82 -0.34 6.74 16 LS Contribution 297.14 15.07 4.48 4.48 Total: -1.00 -32.74 297.14 -5.65 -38.39 By element: Atomic # 1 Polarization: 3.61 SS G_CDS: -3.74 Total: -0.13 kcal Atomic # 6 Polarization: 8.97 SS G_CDS: -0.25 Total: 8.72 kcal Atomic # 7 Polarization: -48.42 SS G_CDS: 0.29 Total: -48.13 kcal Atomic # 8 Polarization: -16.69 SS G_CDS: 0.06 Total: -16.63 kcal Atomic # 14 Polarization: 20.02 SS G_CDS: -5.02 Total: 15.00 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -1.47 Total: -1.70 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -32.74 -5.65 -38.39 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000846025679.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.182 kcal (2) G-P(sol) polarization free energy of solvation -32.744 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.392 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds