Wall clock time and date at job start Mon Mar 30 2020 05:30:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.50700 * 109.47142 * 2 1 4 4 N 1.34229 * 126.28071 * 265.02721 * 3 2 1 5 5 H 0.96996 * 125.73706 * 0.23867 * 4 3 2 6 6 N 1.39935 * 108.52176 * 179.97438 * 4 3 2 7 7 C 1.30526 * 108.89441 * 0.02562 * 6 4 3 8 8 Cl 1.73597 * 126.00455 * 179.97438 * 7 6 4 9 9 C 1.38073 * 126.27883 * 85.00350 * 3 2 1 10 10 C 1.47379 * 126.42427 * 0.03961 * 9 3 2 11 11 O 1.21609 * 120.00194 * 269.95433 * 10 9 3 12 12 N 1.34778 * 120.00241 * 89.94892 * 10 9 3 13 13 C 1.46498 * 120.00315 * 179.97438 * 12 10 9 14 14 H 1.09004 * 109.47233 * 325.00844 * 13 12 10 15 15 C 1.53001 * 109.47006 * 85.00249 * 13 12 10 16 16 C 1.50696 * 109.47192 * 205.00291 * 13 12 10 17 17 H 1.08004 * 120.00076 * 359.97438 * 16 13 12 18 18 C 1.37879 * 119.99861 * 180.02562 * 16 13 12 19 19 N 1.31519 * 120.00129 * 0.02562 * 18 16 13 20 20 Si 1.86804 * 119.99868 * 180.02562 * 18 16 13 21 21 H 1.48492 * 109.47007 * 359.97438 * 20 18 16 22 22 H 1.48497 * 109.46969 * 120.00212 * 20 18 16 23 23 H 1.48502 * 109.46712 * 240.00060 * 20 18 16 24 24 H 1.08999 * 109.46550 * 299.99478 * 1 2 3 25 25 H 1.08990 * 109.47091 * 59.99598 * 1 2 3 26 26 H 1.09001 * 109.46829 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.46997 * 240.00339 * 2 1 3 28 28 H 1.09004 * 109.47267 * 120.00397 * 2 1 3 29 29 H 0.97002 * 119.99821 * 0.02562 * 12 10 9 30 30 H 1.09003 * 109.47145 * 300.00538 * 15 13 12 31 31 H 1.09010 * 109.47064 * 60.00096 * 15 13 12 32 32 H 1.08996 * 109.47372 * 179.97438 * 15 13 12 33 33 H 0.96999 * 119.99820 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 7 2.3856 2.1384 -1.0780 5 1 2.3581 1.8305 -1.9974 6 7 2.7944 3.4074 -0.6528 7 6 2.6965 3.4694 0.6473 8 17 3.0903 4.8409 1.6360 9 6 2.2133 2.2234 1.1088 10 6 1.9525 1.8508 2.5107 11 8 0.8557 2.0471 2.9981 12 7 2.9294 1.2926 3.2526 13 6 2.6703 0.9227 4.6463 14 1 1.9890 1.6465 5.0936 15 6 2.0388 -0.4700 4.6954 16 6 3.9676 0.9134 5.4130 17 1 4.8927 1.1580 4.9122 18 6 3.9737 0.5915 6.7537 19 7 2.8474 0.2921 7.3632 20 14 5.5817 0.5806 7.7043 21 1 6.6965 0.9498 6.7955 22 1 5.5050 1.5600 8.8179 23 1 5.8218 -0.7775 8.2552 24 1 -0.3632 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 1.8934 -0.5138 -0.8900 28 1 1.8934 -0.5139 0.8900 29 1 3.8043 1.1363 2.8640 30 1 1.1005 -0.4632 4.1407 31 1 2.7201 -1.1939 4.2480 32 1 1.8464 -0.7454 5.7323 33 1 2.8516 0.0660 8.3065 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000858919212.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:30:46 Heat of formation + Delta-G solvation = 15.615406 kcal Electronic energy + Delta-G solvation = -18718.459146 eV Core-core repulsion = 15613.312276 eV Total energy + Delta-G solvation = -3105.146870 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.48902 -38.40707 -36.71358 -34.71565 -34.19550 -32.35378 -31.36349 -29.75884 -28.37953 -25.23334 -24.25819 -22.57143 -21.83352 -20.37458 -19.17609 -17.91207 -16.71306 -15.68909 -15.37232 -15.24521 -15.01015 -14.64472 -14.13144 -13.85508 -13.24957 -13.02596 -12.72408 -12.37539 -12.01764 -11.84088 -11.66537 -11.39558 -11.27845 -11.08485 -10.93645 -10.76972 -10.58458 -10.29512 -10.21907 -9.44280 -9.17497 -9.01318 -8.65384 -8.52389 -7.87637 -6.09803 -4.18314 1.52319 1.53715 2.28137 2.88945 3.25720 3.29713 3.34024 3.37150 4.18745 4.38810 4.47896 4.69197 5.07416 5.10024 5.23067 5.35278 5.49782 5.58149 5.74402 5.88985 6.05138 6.18742 6.84098 6.93126 6.97091 7.16733 7.26757 7.48136 7.59504 7.72886 7.94821 8.17428 8.70485 8.81697 9.15566 9.49248 10.96282 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.020264 B = 0.005853 C = 0.004998 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1381.411378 B = 4782.725794 C = 5600.853517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.066 4.066 3 C 0.137 3.863 4 N -0.451 5.451 5 H 0.444 0.556 6 N -0.284 5.284 7 C 0.158 3.842 8 Cl 0.021 6.979 9 C -0.253 4.253 10 C 0.581 3.419 11 O -0.543 6.543 12 N -0.696 5.696 13 C 0.264 3.736 14 H 0.050 0.950 15 C -0.146 4.146 16 C -0.531 4.531 17 H 0.062 0.938 18 C 0.066 3.934 19 N -0.884 5.884 20 Si 0.900 3.100 21 H -0.273 1.273 22 H -0.283 1.283 23 H -0.283 1.283 24 H 0.073 0.927 25 H 0.053 0.947 26 H 0.068 0.932 27 H 0.081 0.919 28 H 0.100 0.900 29 H 0.389 0.611 30 H 0.015 0.985 31 H 0.026 0.974 32 H 0.090 0.910 33 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.539 -0.177 -16.126 16.136 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.105 4.105 3 C 0.005 3.995 4 N -0.161 5.161 5 H 0.290 0.710 6 N -0.110 5.110 7 C -0.034 4.034 8 Cl 0.049 6.951 9 C -0.269 4.269 10 C 0.363 3.637 11 O -0.421 6.421 12 N -0.343 5.343 13 C 0.162 3.838 14 H 0.068 0.932 15 C -0.205 4.205 16 C -0.569 4.569 17 H 0.080 0.920 18 C -0.137 4.137 19 N -0.522 5.522 20 Si 0.728 3.272 21 H -0.197 1.197 22 H -0.209 1.209 23 H -0.209 1.209 24 H 0.092 0.908 25 H 0.072 0.928 26 H 0.087 0.913 27 H 0.100 0.900 28 H 0.119 0.881 29 H 0.221 0.779 30 H 0.034 0.966 31 H 0.045 0.955 32 H 0.109 0.891 33 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -1.026 0.680 -16.467 16.513 hybrid contribution 1.166 -0.426 0.611 1.383 sum 0.140 0.254 -15.856 15.859 Atomic orbital electron populations 1.21769 0.93051 1.02731 1.03217 1.20374 0.97428 0.87993 1.04708 1.21434 0.96685 0.95246 0.86099 1.45774 1.52162 1.09331 1.08786 0.70999 1.77083 1.23968 0.98942 1.10973 1.22597 0.99927 0.90449 0.90452 1.98425 1.92118 1.39505 1.65029 1.20194 1.16799 0.94020 0.95855 1.17104 0.85062 0.78162 0.83332 1.90750 1.23803 1.55123 1.72417 1.46524 1.13139 1.59830 1.14841 1.18782 0.96686 0.93269 0.75027 0.93202 1.22080 0.96730 0.98383 1.03321 1.21261 0.93001 1.47995 0.94667 0.91981 1.24874 0.96628 0.94765 0.97403 1.69912 1.25468 1.45894 1.10884 0.86416 0.83290 0.77658 0.79885 1.19727 1.20882 1.20925 0.90793 0.92792 0.91345 0.90006 0.88137 0.77866 0.96596 0.95486 0.89108 0.92669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.55 9.90 37.16 0.37 -1.19 16 2 C -0.07 -0.68 6.27 -27.88 -0.17 -0.85 16 3 C 0.14 1.78 6.55 -81.60 -0.53 1.24 16 4 N -0.45 -5.09 7.28 33.86 0.25 -4.84 16 5 H 0.44 3.10 8.96 -182.73 -1.64 1.46 16 6 N -0.28 -4.17 12.64 33.17 0.42 -3.75 16 7 C 0.16 2.61 7.89 -16.91 -0.13 2.48 16 8 Cl 0.02 0.35 29.19 -51.86 -1.51 -1.17 16 9 C -0.25 -4.29 5.88 -105.04 -0.62 -4.91 16 10 C 0.58 12.00 7.22 -12.54 -0.09 11.91 16 11 O -0.54 -13.25 16.77 5.27 0.09 -13.16 16 12 N -0.70 -14.69 5.07 -56.03 -0.28 -14.98 16 13 C 0.26 6.65 2.56 -69.08 -0.18 6.48 16 14 H 0.05 1.46 7.58 -51.93 -0.39 1.06 16 15 C -0.15 -3.54 9.26 37.16 0.34 -3.20 16 16 C -0.53 -14.00 8.73 -34.44 -0.30 -14.30 16 17 H 0.06 1.58 7.74 -52.48 -0.41 1.18 16 18 C 0.07 1.77 5.30 -17.82 -0.09 1.68 16 19 N -0.88 -24.73 11.32 55.43 0.63 -24.10 16 20 Si 0.90 20.63 29.54 -169.99 -5.02 15.61 16 21 H -0.27 -6.14 7.11 56.52 0.40 -5.74 16 22 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 23 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 24 H 0.07 1.02 8.14 -51.93 -0.42 0.59 16 25 H 0.05 0.48 8.14 -51.93 -0.42 0.06 16 26 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 27 H 0.08 0.56 8.14 -51.93 -0.42 0.13 16 28 H 0.10 1.17 8.08 -51.93 -0.42 0.75 16 29 H 0.39 7.36 8.52 -40.82 -0.35 7.01 16 30 H 0.01 0.35 8.14 -51.93 -0.42 -0.07 16 31 H 0.03 0.60 8.14 -51.92 -0.42 0.17 16 32 H 0.09 2.40 6.07 -51.93 -0.32 2.09 16 33 H 0.26 6.98 8.31 -40.82 -0.34 6.64 16 LS Contribution 306.79 15.07 4.62 4.62 Total: -1.00 -31.64 306.79 -7.42 -39.06 By element: Atomic # 1 Polarization: 8.56 SS G_CDS: -5.19 Total: 3.37 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -1.41 Total: -0.66 kcal Atomic # 7 Polarization: -48.68 SS G_CDS: 1.01 Total: -47.67 kcal Atomic # 8 Polarization: -13.25 SS G_CDS: 0.09 Total: -13.16 kcal Atomic # 14 Polarization: 20.63 SS G_CDS: -5.02 Total: 15.61 kcal Atomic # 17 Polarization: 0.35 SS G_CDS: -1.51 Total: -1.17 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -31.64 -7.42 -39.06 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000858919212.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.671 kcal (2) G-P(sol) polarization free energy of solvation -31.639 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.031 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.055 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.615 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds