Wall clock time and date at job start Mon Mar 30 2020 05:30:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.50700 * 109.47142 * 2 1 4 4 N 1.34229 * 126.28071 * 265.02721 * 3 2 1 5 5 H 0.96996 * 125.73706 * 0.23867 * 4 3 2 6 6 N 1.39935 * 108.52176 * 179.97438 * 4 3 2 7 7 C 1.30526 * 108.89441 * 0.02562 * 6 4 3 8 8 Cl 1.73597 * 126.00445 * 179.97438 * 7 6 4 9 9 C 1.38073 * 126.27883 * 85.00350 * 3 2 1 10 10 C 1.47380 * 126.42063 * 359.97438 * 9 3 2 11 11 O 1.21609 * 120.00016 * 270.01399 * 10 9 3 12 12 N 1.34781 * 119.99924 * 90.02510 * 10 9 3 13 13 C 1.46500 * 119.99970 * 179.97438 * 12 10 9 14 14 H 1.08996 * 109.47355 * 34.99634 * 13 12 10 15 15 C 1.53003 * 109.46817 * 274.99452 * 13 12 10 16 16 C 1.50699 * 109.47012 * 154.99714 * 13 12 10 17 17 H 1.07996 * 119.99991 * 0.02562 * 16 13 12 18 18 C 1.37879 * 119.99823 * 179.97438 * 16 13 12 19 19 N 1.31514 * 120.00151 * 359.97438 * 18 16 13 20 20 Si 1.86798 * 119.99749 * 179.97438 * 18 16 13 21 21 H 1.48500 * 109.47054 * 90.00137 * 20 18 16 22 22 H 1.48506 * 109.47126 * 209.99804 * 20 18 16 23 23 H 1.48498 * 109.47576 * 330.00005 * 20 18 16 24 24 H 1.08990 * 109.47091 * 59.99598 * 1 2 3 25 25 H 1.09001 * 109.46829 * 179.97438 * 1 2 3 26 26 H 1.08999 * 109.46550 * 299.99478 * 1 2 3 27 27 H 1.09003 * 109.46997 * 240.00339 * 2 1 3 28 28 H 1.09004 * 109.47267 * 120.00397 * 2 1 3 29 29 H 0.96994 * 119.99937 * 359.97438 * 12 10 9 30 30 H 1.08998 * 109.47387 * 60.00487 * 15 13 12 31 31 H 1.09007 * 109.46806 * 180.02562 * 15 13 12 32 32 H 1.08996 * 109.47306 * 300.00212 * 15 13 12 33 33 H 0.97000 * 119.99859 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 7 2.3856 2.1384 -1.0780 5 1 2.3581 1.8305 -1.9974 6 7 2.7944 3.4074 -0.6528 7 6 2.6965 3.4694 0.6473 8 17 3.0903 4.8409 1.6360 9 6 2.2133 2.2234 1.1088 10 6 1.9512 1.8512 2.5106 11 8 0.8540 2.0475 2.9968 12 7 2.9276 1.2935 3.2536 13 6 2.6672 0.9240 4.6471 14 1 1.6388 0.5764 4.7448 15 6 2.8811 2.1433 5.5464 16 6 3.6107 -0.1762 5.0598 17 1 4.3324 -0.5614 4.3547 18 6 3.5533 -0.6903 6.3379 19 7 2.6754 -0.2202 7.1969 20 14 4.7223 -2.0546 6.8492 21 1 5.9615 -1.4599 7.4111 22 1 4.0709 -2.9051 7.8777 23 1 5.0638 -2.8835 5.6653 24 1 -0.3633 0.5138 -0.8899 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3632 0.5138 0.8900 27 1 1.8934 -0.5138 -0.8900 28 1 1.8934 -0.5139 0.8900 29 1 3.8027 1.1368 2.8657 30 1 2.1987 2.9391 5.2480 31 1 2.6878 1.8683 6.5834 32 1 3.9095 2.4909 5.4488 33 1 2.6348 -0.5822 8.0960 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000858919213.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:30:49 Heat of formation + Delta-G solvation = 15.401702 kcal Electronic energy + Delta-G solvation = -18711.519483 eV Core-core repulsion = 15606.363346 eV Total energy + Delta-G solvation = -3105.156137 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.48761 -38.40387 -36.74027 -34.71418 -34.17204 -32.35984 -31.36396 -29.74389 -28.36679 -25.22644 -24.24476 -22.54494 -21.84477 -20.36503 -19.18190 -17.91345 -16.67954 -15.73420 -15.36868 -15.24488 -14.96098 -14.64272 -14.18497 -13.76689 -13.39279 -12.89329 -12.71310 -12.33691 -12.05642 -11.85726 -11.62645 -11.39215 -11.26020 -11.09954 -10.93581 -10.72578 -10.61171 -10.30689 -10.20647 -9.45133 -9.17226 -9.01149 -8.65157 -8.52942 -7.87265 -6.10381 -4.19498 1.51283 1.53267 2.27805 2.88784 3.25165 3.29646 3.32445 3.34156 4.18702 4.38432 4.48920 4.71570 5.08857 5.12948 5.21783 5.38323 5.50501 5.59445 5.78018 5.92118 6.05901 6.21831 6.88744 6.93464 7.03946 7.19980 7.26758 7.48991 7.60314 7.73013 7.95056 8.18149 8.70285 8.80597 9.15490 9.48104 10.95524 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.020183 B = 0.005760 C = 0.005041 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1386.948228 B = 4859.578953 C = 5552.859550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.067 4.067 3 C 0.139 3.861 4 N -0.451 5.451 5 H 0.445 0.555 6 N -0.284 5.284 7 C 0.158 3.842 8 Cl 0.019 6.981 9 C -0.254 4.254 10 C 0.581 3.419 11 O -0.543 6.543 12 N -0.697 5.697 13 C 0.265 3.735 14 H 0.050 0.950 15 C -0.148 4.148 16 C -0.533 4.533 17 H 0.061 0.939 18 C 0.067 3.933 19 N -0.883 5.883 20 Si 0.900 3.100 21 H -0.280 1.280 22 H -0.285 1.285 23 H -0.274 1.274 24 H 0.052 0.948 25 H 0.068 0.932 26 H 0.073 0.927 27 H 0.081 0.919 28 H 0.102 0.898 29 H 0.389 0.611 30 H 0.016 0.984 31 H 0.090 0.910 32 H 0.027 0.973 33 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.153 1.949 -15.400 15.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.106 4.106 3 C 0.007 3.993 4 N -0.160 5.160 5 H 0.290 0.710 6 N -0.110 5.110 7 C -0.034 4.034 8 Cl 0.047 6.953 9 C -0.269 4.269 10 C 0.363 3.637 11 O -0.421 6.421 12 N -0.343 5.343 13 C 0.164 3.836 14 H 0.068 0.932 15 C -0.206 4.206 16 C -0.571 4.571 17 H 0.079 0.921 18 C -0.136 4.136 19 N -0.520 5.520 20 Si 0.728 3.272 21 H -0.206 1.206 22 H -0.211 1.211 23 H -0.199 1.199 24 H 0.072 0.928 25 H 0.087 0.913 26 H 0.092 0.908 27 H 0.100 0.900 28 H 0.121 0.879 29 H 0.221 0.779 30 H 0.035 0.965 31 H 0.108 0.892 32 H 0.046 0.954 33 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -0.333 2.829 -15.730 15.986 hybrid contribution 0.974 -1.078 0.390 1.505 sum 0.641 1.751 -15.339 15.452 Atomic orbital electron populations 1.21766 0.93049 1.02771 1.03155 1.20393 0.97432 0.87941 1.04848 1.21459 0.96505 0.95262 0.86062 1.45777 1.52146 1.09307 1.08810 0.70982 1.77076 1.23979 0.98989 1.10947 1.22572 1.00056 0.90353 0.90462 1.98418 1.92152 1.39591 1.65113 1.20190 1.16875 0.93997 0.95876 1.17103 0.85003 0.78310 0.83241 1.90750 1.23849 1.54784 1.72717 1.46528 1.13252 1.59692 1.14877 1.18774 0.98126 0.92534 0.74207 0.93226 1.22078 0.97742 0.96879 1.03923 1.21214 1.19034 1.19091 0.97781 0.92081 1.24873 0.95614 0.96907 0.96240 1.69905 1.34595 1.41843 1.05683 0.86472 0.80730 0.81631 0.78391 1.20569 1.21099 1.19898 0.92848 0.91304 0.90796 0.90006 0.87931 0.77870 0.96496 0.89179 0.95423 0.92592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.61 9.90 37.16 0.37 -1.24 16 2 C -0.07 -0.71 6.27 -27.88 -0.17 -0.89 16 3 C 0.14 1.83 6.55 -81.60 -0.53 1.29 16 4 N -0.45 -5.12 7.28 33.86 0.25 -4.87 16 5 H 0.44 3.14 8.96 -182.73 -1.64 1.51 16 6 N -0.28 -4.15 12.64 33.17 0.42 -3.73 16 7 C 0.16 2.58 7.89 -16.91 -0.13 2.45 16 8 Cl 0.02 0.31 29.19 -51.86 -1.51 -1.21 16 9 C -0.25 -4.31 5.88 -105.04 -0.62 -4.92 16 10 C 0.58 12.00 7.23 -12.54 -0.09 11.91 16 11 O -0.54 -13.25 16.77 5.27 0.09 -13.16 16 12 N -0.70 -14.70 5.07 -56.02 -0.28 -14.98 16 13 C 0.27 6.69 2.56 -69.08 -0.18 6.51 16 14 H 0.05 1.43 7.58 -51.93 -0.39 1.04 16 15 C -0.15 -3.70 9.26 37.16 0.34 -3.35 16 16 C -0.53 -13.90 8.73 -34.44 -0.30 -14.20 16 17 H 0.06 1.52 7.74 -52.49 -0.41 1.11 16 18 C 0.07 1.78 5.30 -17.82 -0.09 1.68 16 19 N -0.88 -24.62 11.32 55.43 0.63 -23.99 16 20 Si 0.90 20.38 29.54 -169.99 -5.02 15.36 16 21 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 22 H -0.29 -6.47 7.11 56.52 0.40 -6.06 16 23 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 24 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 25 H 0.07 0.63 8.14 -51.93 -0.42 0.20 16 26 H 0.07 1.04 8.14 -51.93 -0.42 0.62 16 27 H 0.08 0.59 8.14 -51.93 -0.42 0.16 16 28 H 0.10 1.26 8.08 -51.93 -0.42 0.84 16 29 H 0.39 7.36 8.52 -40.82 -0.35 7.01 16 30 H 0.02 0.40 8.14 -51.93 -0.42 -0.02 16 31 H 0.09 2.44 6.07 -51.92 -0.32 2.12 16 32 H 0.03 0.65 8.14 -51.93 -0.42 0.22 16 33 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 LS Contribution 306.79 15.07 4.62 4.62 Total: -1.00 -31.42 306.79 -7.42 -38.83 By element: Atomic # 1 Polarization: 9.09 SS G_CDS: -5.19 Total: 3.90 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -1.41 Total: -0.77 kcal Atomic # 7 Polarization: -48.59 SS G_CDS: 1.01 Total: -47.58 kcal Atomic # 8 Polarization: -13.25 SS G_CDS: 0.09 Total: -13.16 kcal Atomic # 14 Polarization: 20.38 SS G_CDS: -5.02 Total: 15.36 kcal Atomic # 17 Polarization: 0.31 SS G_CDS: -1.51 Total: -1.21 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -31.42 -7.42 -38.83 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000858919213.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.235 kcal (2) G-P(sol) polarization free energy of solvation -31.417 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.833 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds