Wall clock time and date at job start Mon Mar 30 2020 04:50:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46497 * 120.00300 * 2 1 4 4 C 1.38003 * 120.00020 * 179.97438 * 2 1 3 5 5 N 1.33091 * 120.04029 * 179.97438 * 4 2 1 6 6 C 1.32274 * 120.07334 * 180.02562 * 5 4 2 7 7 Cl 1.73605 * 119.93034 * 179.97438 * 6 5 4 8 8 N 1.32310 * 120.14522 * 359.97438 * 6 5 4 9 9 C 1.33065 * 120.06918 * 0.04417 * 8 6 5 10 10 N 1.37999 * 120.03897 * 179.97438 * 9 8 6 11 11 C 1.46494 * 120.00329 * 179.97438 * 10 9 8 12 12 C 1.46506 * 119.99674 * 359.95579 * 10 9 8 13 13 C 1.50702 * 109.47080 * 90.00067 * 12 10 9 14 14 H 1.08006 * 119.99585 * 359.97438 * 13 12 10 15 15 C 1.37869 * 120.00322 * 179.97438 * 13 12 10 16 16 N 1.31520 * 119.99857 * 0.02562 * 15 13 12 17 17 Si 1.86794 * 120.00467 * 180.02562 * 15 13 12 18 18 H 1.48498 * 109.46962 * 359.97438 * 17 15 13 19 19 H 1.48494 * 109.47587 * 119.99748 * 17 15 13 20 20 H 1.48504 * 109.47166 * 240.00217 * 17 15 13 21 21 N 1.32864 * 120.03409 * 0.02562 * 4 2 1 22 22 H 1.09001 * 109.47338 * 270.00231 * 1 2 3 23 23 H 1.09005 * 109.46850 * 30.00449 * 1 2 3 24 24 H 1.09002 * 109.47252 * 149.99932 * 1 2 3 25 25 H 1.09000 * 109.46960 * 269.99568 * 3 2 1 26 26 H 1.08999 * 109.47108 * 29.99563 * 3 2 1 27 27 H 1.08998 * 109.47501 * 150.00124 * 3 2 1 28 28 H 1.09004 * 109.47229 * 90.00126 * 11 10 9 29 29 H 1.08998 * 109.47380 * 210.00008 * 11 10 9 30 30 H 1.08999 * 109.47026 * 329.99648 * 11 10 9 31 31 H 1.09001 * 109.47055 * 209.99891 * 12 10 9 32 32 H 1.09000 * 109.46910 * 330.00193 * 12 10 9 33 33 H 0.97002 * 120.00516 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.1550 -1.1951 0.0005 5 7 3.4859 -1.1961 0.0000 6 6 4.1480 -2.3412 0.0000 7 17 5.8840 -2.3381 -0.0013 8 7 3.4900 -3.4891 0.0010 9 6 2.1593 -3.4949 0.0012 10 7 1.4737 -4.6925 0.0017 11 6 0.0088 -4.6979 0.0024 12 6 2.2109 -5.9585 0.0011 13 6 2.4648 -6.3926 1.4218 14 1 2.1126 -5.7859 2.2429 15 6 3.1466 -7.5643 1.6733 16 7 3.5759 -8.3029 0.6733 17 14 3.4606 -8.1027 3.4341 18 1 2.8808 -7.1042 4.3679 19 1 2.8277 -9.4255 3.6677 20 1 4.9237 -8.2060 3.6667 21 7 1.4914 -2.3462 0.0005 22 1 -0.3634 0.0000 1.0277 23 1 -0.3633 0.8900 -0.5139 24 1 -0.3634 -0.8900 -0.5138 25 1 2.3793 1.5832 -1.0277 26 1 1.6085 2.0283 0.5138 27 1 3.1500 1.1383 0.5138 28 1 -0.3551 -4.6994 -1.0251 29 1 -0.3510 -5.5891 0.5166 30 1 -0.3576 -3.8092 0.5164 31 1 1.6242 -6.7204 -0.5122 32 1 3.1625 -5.8246 -0.5134 33 1 4.0553 -9.1274 0.8501 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000061522662.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:50:55 Heat of formation + Delta-G solvation = 90.290987 kcal Electronic energy + Delta-G solvation = -18680.076327 eV Core-core repulsion = 15610.460384 eV Total energy + Delta-G solvation = -3069.615942 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.089 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.95110 -37.34819 -36.78024 -35.83279 -33.02228 -32.33722 -31.91621 -28.22429 -27.96332 -26.10655 -25.84164 -23.39434 -22.68990 -20.62577 -18.28484 -17.61189 -16.55884 -15.78315 -15.64438 -15.24837 -14.53381 -14.50020 -14.33595 -13.55437 -13.51882 -13.34079 -12.61756 -12.31668 -12.17004 -12.05172 -11.94675 -11.67094 -11.27573 -11.11502 -11.08110 -10.80039 -10.65908 -10.15362 -10.05453 -9.56390 -9.09519 -8.88372 -8.45433 -8.14097 -7.45262 -6.06907 -4.12178 1.49707 1.68943 1.88943 2.79169 3.28725 3.36499 3.38870 3.47818 4.39284 4.45694 4.68315 4.74047 5.13994 5.25592 5.27748 5.34313 5.61991 5.64045 5.78682 5.83629 5.99137 6.09166 6.27858 6.56953 6.76831 6.93259 7.28794 7.43086 7.49884 7.77256 7.95838 8.13280 8.17086 8.86470 9.01856 9.52444 11.00460 Molecular weight = 271.09amu Principal moments of inertia in cm(-1) A = 0.018942 B = 0.006130 C = 0.005115 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1477.871781 B = 4566.894396 C = 5472.952513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.105 3.895 2 N -0.588 5.588 3 C 0.104 3.896 4 C 0.633 3.367 5 N -0.646 5.646 6 C 0.469 3.531 7 Cl 0.019 6.981 8 N -0.594 5.594 9 C 0.638 3.362 10 N -0.545 5.545 11 C 0.103 3.897 12 C 0.251 3.749 13 C -0.525 4.525 14 H 0.056 0.944 15 C 0.065 3.935 16 N -0.892 5.892 17 Si 0.897 3.103 18 H -0.275 1.275 19 H -0.283 1.283 20 H -0.282 1.282 21 N -0.657 5.657 22 H 0.051 0.949 23 H 0.066 0.934 24 H 0.081 0.919 25 H 0.050 0.950 26 H 0.066 0.934 27 H 0.082 0.918 28 H 0.046 0.954 29 H 0.075 0.925 30 H 0.070 0.930 31 H 0.038 0.962 32 H 0.055 0.945 33 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.616 15.571 -2.495 16.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.307 5.307 3 C -0.039 4.039 4 C 0.269 3.731 5 N -0.387 5.387 6 C 0.164 3.836 7 Cl 0.047 6.953 8 N -0.331 5.331 9 C 0.276 3.724 10 N -0.256 5.256 11 C -0.041 4.041 12 C 0.132 3.868 13 C -0.564 4.564 14 H 0.075 0.925 15 C -0.137 4.137 16 N -0.531 5.531 17 Si 0.725 3.275 18 H -0.199 1.199 19 H -0.209 1.209 20 H -0.208 1.208 21 N -0.399 5.399 22 H 0.069 0.931 23 H 0.085 0.915 24 H 0.100 0.900 25 H 0.069 0.931 26 H 0.085 0.915 27 H 0.101 0.899 28 H 0.064 0.936 29 H 0.094 0.906 30 H 0.088 0.912 31 H 0.056 0.944 32 H 0.073 0.927 33 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -4.647 15.248 -2.543 16.142 hybrid contribution 0.475 -0.377 1.015 1.183 sum -4.172 14.870 -1.528 15.520 Atomic orbital electron populations 1.21603 0.77465 1.03039 1.01661 1.45711 1.05769 1.01786 1.77402 1.21608 0.97711 0.82925 1.01617 1.18674 0.84001 0.85899 0.84522 1.67789 1.07609 1.30480 1.32778 1.22342 0.89264 0.84232 0.87806 1.98409 1.02726 1.98342 1.95867 1.68134 1.08207 1.28905 1.27808 1.18881 0.83784 0.85895 0.83853 1.46933 1.05882 1.03075 1.69684 1.21583 0.78756 1.02973 1.00770 1.19553 0.92654 0.76554 0.98056 1.21384 1.36526 1.06537 0.91915 0.92533 1.24876 0.95226 0.96263 0.97377 1.69934 1.38117 1.14448 1.30598 0.86453 0.78146 0.78300 0.84595 1.19922 1.20941 1.20776 1.67985 1.40173 0.97104 1.34672 0.93071 0.91507 0.89981 0.93097 0.91508 0.89927 0.93576 0.90596 0.91171 0.94373 0.92722 0.92692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.11 10.45 59.85 0.63 1.73 16 2 N -0.59 -8.02 3.36 -191.75 -0.64 -8.67 16 3 C 0.10 1.08 10.45 59.85 0.63 1.70 16 4 C 0.63 11.42 8.19 -322.14 -2.64 8.78 16 5 N -0.65 -12.16 9.24 -12.42 -0.11 -12.27 16 6 C 0.47 9.57 8.25 -91.30 -0.75 8.82 16 7 Cl 0.02 0.33 29.30 -51.86 -1.52 -1.19 16 8 N -0.59 -13.76 9.24 -12.42 -0.11 -13.88 16 9 C 0.64 14.17 8.19 -322.16 -2.64 11.53 16 10 N -0.54 -12.02 2.94 -185.18 -0.55 -12.57 16 11 C 0.10 1.78 10.45 59.84 0.63 2.41 16 12 C 0.25 6.40 5.18 -5.19 -0.03 6.37 16 13 C -0.52 -14.56 9.39 -34.44 -0.32 -14.88 16 14 H 0.06 1.61 7.81 -52.48 -0.41 1.20 16 15 C 0.06 1.82 5.46 -17.82 -0.10 1.72 16 16 N -0.89 -25.86 13.29 55.43 0.74 -25.12 16 17 Si 0.90 21.69 29.54 -169.99 -5.02 16.67 16 18 H -0.27 -6.63 7.11 56.52 0.40 -6.22 16 19 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 20 H -0.28 -6.81 7.11 56.52 0.40 -6.40 16 21 N -0.66 -12.85 8.01 -14.76 -0.12 -12.96 16 22 H 0.05 0.51 8.14 -51.93 -0.42 0.09 16 23 H 0.07 0.50 8.07 -51.93 -0.42 0.08 16 24 H 0.08 0.97 7.37 -51.93 -0.38 0.59 16 25 H 0.05 0.48 8.14 -51.93 -0.42 0.06 16 26 H 0.07 0.50 8.07 -51.93 -0.42 0.08 16 27 H 0.08 0.96 7.37 -51.93 -0.38 0.58 16 28 H 0.05 0.71 8.14 -51.93 -0.42 0.29 16 29 H 0.08 1.29 8.07 -51.93 -0.42 0.87 16 30 H 0.07 1.14 7.37 -51.93 -0.38 0.76 16 31 H 0.04 0.99 8.07 -51.93 -0.42 0.57 16 32 H 0.05 1.53 7.37 -51.93 -0.38 1.15 16 33 H 0.26 7.22 8.31 -40.82 -0.34 6.88 16 LS Contribution 304.55 15.07 4.59 4.59 Total: -1.00 -31.58 304.55 -11.37 -42.96 By element: Atomic # 1 Polarization: -1.71 SS G_CDS: -4.02 Total: -5.73 kcal Atomic # 6 Polarization: 32.78 SS G_CDS: -4.60 Total: 28.18 kcal Atomic # 7 Polarization: -84.67 SS G_CDS: -0.80 Total: -85.47 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -5.02 Total: 16.67 kcal Atomic # 17 Polarization: 0.33 SS G_CDS: -1.52 Total: -1.19 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -31.58 -11.37 -42.96 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000061522662.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.247 kcal (2) G-P(sol) polarization free energy of solvation -31.584 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.956 kcal (6) G-S(sol) free energy of system = (1) + (5) 90.291 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds