Wall clock time and date at job start Mon Mar 30 2020 04:50:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 N 1.46502 * 109.46834 * 2 1 4 4 C 1.38002 * 119.99484 * 179.97438 * 3 2 1 5 5 N 1.33085 * 120.03606 * 359.97438 * 4 3 2 6 6 C 1.32294 * 120.07045 * 180.02562 * 5 4 3 7 7 Cl 1.73596 * 119.92817 * 180.02562 * 6 5 4 8 8 N 1.32309 * 120.14140 * 0.02562 * 6 5 4 9 9 C 1.33062 * 120.06947 * 359.97438 * 8 6 5 10 10 N 1.38003 * 120.03492 * 179.97438 * 9 8 6 11 11 C 1.46500 * 119.99882 * 0.02562 * 10 9 8 12 12 H 1.09001 * 109.47297 * 34.99604 * 11 10 9 13 13 C 1.53006 * 109.46998 * 274.99965 * 11 10 9 14 14 C 1.50698 * 109.46840 * 155.00138 * 11 10 9 15 15 H 1.07993 * 120.00472 * 0.02562 * 14 11 10 16 16 C 1.37882 * 119.99554 * 180.02562 * 14 11 10 17 17 N 1.31515 * 120.00420 * 359.97438 * 16 14 11 18 18 Si 1.86798 * 119.99716 * 179.97438 * 16 14 11 19 19 H 1.48497 * 109.47510 * 359.97438 * 18 16 14 20 20 H 1.48507 * 109.47309 * 119.99914 * 18 16 14 21 21 H 1.48498 * 109.47163 * 239.99790 * 18 16 14 22 22 N 1.32855 * 120.03485 * 180.25630 * 4 3 2 23 23 H 1.08994 * 109.47220 * 300.00180 * 1 2 3 24 24 H 1.09001 * 109.46798 * 60.00038 * 1 2 3 25 25 H 1.08996 * 109.46919 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.46904 * 240.00087 * 2 1 3 27 27 H 1.09001 * 109.46798 * 119.99962 * 2 1 3 28 28 H 0.96995 * 120.00370 * 359.97438 * 3 2 1 29 29 H 0.96995 * 119.99825 * 180.02562 * 10 9 8 30 30 H 1.09001 * 109.47002 * 179.97438 * 13 11 10 31 31 H 1.08993 * 109.46955 * 300.00226 * 13 11 10 32 32 H 1.09000 * 109.47050 * 60.00054 * 13 11 10 33 33 H 0.97001 * 120.00306 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 3.3751 1.6334 0.0005 5 7 4.2405 0.6223 0.0016 6 6 5.5414 0.8632 0.0026 7 17 6.6669 -0.4584 0.0033 8 7 5.9863 2.1093 0.0031 9 6 5.1260 3.1244 0.0021 10 7 5.5908 4.4238 0.0032 11 6 7.0321 4.6861 0.0049 12 1 7.5410 3.9232 -0.5843 13 6 7.5548 4.6531 1.4425 14 6 7.2964 6.0432 -0.5947 15 1 6.4731 6.6498 -0.9419 16 6 8.5893 6.5104 -0.7000 17 7 9.5919 5.7719 -0.2768 18 14 8.9170 8.1923 -1.4438 19 1 7.6297 8.8177 -1.8399 20 1 9.5983 9.0521 -0.4429 21 1 9.7835 8.0439 -2.6406 22 7 3.8188 2.8856 0.0057 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 -0.0005 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 1.3880 2.1185 -0.0004 29 1 4.9632 5.1633 0.0028 30 1 8.6273 4.8478 1.4437 31 1 7.0459 5.4159 2.0316 32 1 7.3636 3.6715 1.8762 33 1 10.5015 6.1008 -0.3506 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071766810.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:50:15 Heat of formation + Delta-G solvation = 64.482130 kcal Electronic energy + Delta-G solvation = -18217.485691 eV Core-core repulsion = 15146.750592 eV Total energy + Delta-G solvation = -3070.735098 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.089 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.99528 -37.16712 -36.80287 -35.74033 -33.40179 -32.93181 -31.56972 -29.85514 -28.55633 -25.34213 -24.18006 -23.76406 -22.25627 -20.65914 -18.56523 -18.15674 -16.68708 -15.78798 -15.62438 -15.28852 -14.82167 -14.76050 -14.62951 -13.67429 -13.50066 -12.69812 -12.54266 -12.51060 -12.44224 -12.00126 -11.70114 -11.31764 -11.22933 -11.09870 -10.87228 -10.61157 -10.32481 -10.26447 -10.14801 -9.20404 -9.14850 -8.98532 -8.57027 -8.44564 -7.69188 -6.17230 -4.26589 1.40706 1.61192 1.83400 2.87980 3.22304 3.30289 3.33238 3.65420 4.30539 4.36715 4.71004 4.75042 4.93334 4.95870 5.15937 5.18102 5.59793 5.76196 5.78956 6.00652 6.59288 6.73497 6.80180 6.99918 7.06319 7.29912 7.31862 7.54401 7.62020 7.79180 7.96364 8.11769 8.44315 8.72901 9.01061 9.40235 10.88711 Molecular weight = 271.09amu Principal moments of inertia in cm(-1) A = 0.023805 B = 0.004649 C = 0.004039 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1175.961667 B = 6021.859994 C = 6930.246963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.132 3.868 3 N -0.692 5.692 4 C 0.636 3.364 5 N -0.643 5.643 6 C 0.471 3.529 7 Cl 0.020 6.980 8 N -0.607 5.607 9 C 0.636 3.364 10 N -0.647 5.647 11 C 0.271 3.729 12 H 0.060 0.940 13 C -0.146 4.146 14 C -0.537 4.537 15 H 0.063 0.937 16 C 0.069 3.931 17 N -0.880 5.880 18 Si 0.903 3.097 19 H -0.273 1.273 20 H -0.282 1.282 21 H -0.282 1.282 22 N -0.663 5.663 23 H 0.061 0.939 24 H 0.061 0.939 25 H 0.075 0.925 26 H 0.068 0.932 27 H 0.068 0.932 28 H 0.414 0.586 29 H 0.408 0.592 30 H 0.094 0.906 31 H 0.026 0.974 32 H 0.016 0.984 33 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.123 -10.325 1.146 16.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C 0.008 3.992 3 N -0.331 5.331 4 C 0.270 3.730 5 N -0.385 5.385 6 C 0.165 3.835 7 Cl 0.048 6.952 8 N -0.344 5.344 9 C 0.272 3.728 10 N -0.277 5.277 11 C 0.169 3.831 12 H 0.078 0.922 13 C -0.205 4.205 14 C -0.576 4.576 15 H 0.081 0.919 16 C -0.135 4.135 17 N -0.518 5.518 18 Si 0.731 3.269 19 H -0.197 1.197 20 H -0.208 1.208 21 H -0.208 1.208 22 N -0.405 5.405 23 H 0.080 0.920 24 H 0.080 0.920 25 H 0.094 0.906 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.252 0.748 29 H 0.245 0.755 30 H 0.112 0.888 31 H 0.045 0.955 32 H 0.035 0.965 33 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -12.604 -10.468 1.166 16.426 hybrid contribution -0.103 1.303 -0.355 1.354 sum -12.707 -9.165 0.810 15.688 Atomic orbital electron populations 1.22020 0.94594 1.03143 1.02563 1.21261 0.93528 0.81680 1.02704 1.44012 1.00900 1.08964 1.79271 1.18749 0.86676 0.83501 0.84034 1.67845 1.02036 1.35910 1.32677 1.22363 0.86067 0.87561 0.87549 1.98413 1.58215 1.42766 1.95844 1.68111 1.39340 0.98051 1.28940 1.19106 0.82547 0.87712 0.83403 1.45387 1.11238 1.00215 1.70846 1.19004 0.72213 0.97330 0.94510 0.92245 1.22096 1.04496 0.96863 0.96998 1.21216 0.93120 1.01467 1.41756 0.91879 1.24852 0.95759 0.97819 0.95062 1.69905 0.99297 1.36961 1.45601 0.86361 0.78388 0.83314 0.78860 1.19713 1.20810 1.20814 1.68037 1.15966 1.21746 1.34791 0.91987 0.91980 0.90639 0.91380 0.91391 0.74827 0.75530 0.88790 0.95505 0.96473 0.92509 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.05 10.03 37.16 0.37 -0.68 16 2 C 0.13 1.28 6.40 -4.04 -0.03 1.25 16 3 N -0.69 -8.60 5.69 -62.18 -0.35 -8.95 16 4 C 0.64 10.88 8.47 -322.16 -2.73 8.15 16 5 N -0.64 -11.42 9.70 -12.42 -0.12 -11.54 16 6 C 0.47 9.00 8.25 -91.28 -0.75 8.24 16 7 Cl 0.02 0.32 29.30 -51.86 -1.52 -1.20 16 8 N -0.61 -13.10 9.33 -12.42 -0.12 -13.22 16 9 C 0.64 13.54 8.45 -322.15 -2.72 10.81 16 10 N -0.65 -14.05 5.20 -56.80 -0.30 -14.34 16 11 C 0.27 6.73 2.57 -69.08 -0.18 6.55 16 12 H 0.06 1.66 7.53 -51.93 -0.39 1.26 16 13 C -0.15 -3.54 9.27 37.16 0.34 -3.19 16 14 C -0.54 -14.05 8.73 -34.44 -0.30 -14.35 16 15 H 0.06 1.60 7.74 -52.49 -0.41 1.20 16 16 C 0.07 1.82 5.30 -17.82 -0.09 1.72 16 17 N -0.88 -24.18 11.32 55.43 0.63 -23.55 16 18 Si 0.90 20.44 29.54 -169.99 -5.02 15.42 16 19 H -0.27 -6.08 7.11 56.52 0.40 -5.67 16 20 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 21 H -0.28 -6.40 7.11 56.52 0.40 -5.99 16 22 N -0.66 -12.65 10.57 -14.76 -0.16 -12.80 16 23 H 0.06 0.37 8.14 -51.93 -0.42 -0.05 16 24 H 0.06 0.38 8.14 -51.93 -0.42 -0.05 16 25 H 0.07 0.38 8.14 -51.93 -0.42 -0.04 16 26 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 27 H 0.07 0.70 8.14 -51.93 -0.42 0.27 16 28 H 0.41 4.41 8.59 -40.82 -0.35 4.06 16 29 H 0.41 8.17 8.66 -40.82 -0.35 7.81 16 30 H 0.09 2.47 6.07 -51.93 -0.32 2.16 16 31 H 0.03 0.61 8.14 -51.93 -0.42 0.19 16 32 H 0.02 0.39 8.14 -51.93 -0.42 -0.03 16 33 H 0.26 6.89 8.31 -40.82 -0.34 6.55 16 LS Contribution 303.34 15.07 4.57 4.57 Total: -1.00 -28.73 303.34 -12.38 -41.11 By element: Atomic # 1 Polarization: 9.92 SS G_CDS: -3.91 Total: 6.01 kcal Atomic # 6 Polarization: 24.59 SS G_CDS: -6.09 Total: 18.51 kcal Atomic # 7 Polarization: -84.00 SS G_CDS: -0.41 Total: -84.41 kcal Atomic # 14 Polarization: 20.44 SS G_CDS: -5.02 Total: 15.42 kcal Atomic # 17 Polarization: 0.32 SS G_CDS: -1.52 Total: -1.20 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -28.73 -12.38 -41.11 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071766810.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.592 kcal (2) G-P(sol) polarization free energy of solvation -28.729 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.110 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds