Wall clock time and date at job start Mon Mar 30 2020 04:50:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46499 * 109.46709 * 2 1 4 4 C 1.38002 * 119.99985 * 179.97438 * 3 2 1 5 5 N 1.33094 * 120.03149 * 0.02562 * 4 3 2 6 6 C 1.32286 * 120.06569 * 180.02562 * 5 4 3 7 7 Cl 1.73605 * 119.92423 * 179.97438 * 6 5 4 8 8 N 1.32311 * 120.14945 * 0.02562 * 6 5 4 9 9 C 1.33065 * 120.06493 * 359.97438 * 8 6 5 10 10 N 1.37997 * 120.03314 * 180.02562 * 9 8 6 11 11 C 1.46501 * 120.00298 * 359.97438 * 10 9 8 12 12 C 1.52994 * 109.47146 * 179.97438 * 11 10 9 13 13 C 1.50705 * 109.46993 * 180.02562 * 12 11 10 14 14 H 1.07999 * 119.99561 * 359.97438 * 13 12 11 15 15 C 1.37871 * 120.00112 * 180.02562 * 13 12 11 16 16 N 1.31513 * 120.00223 * 359.97438 * 15 13 12 17 17 Si 1.86803 * 119.99981 * 179.97438 * 15 13 12 18 18 H 1.48504 * 109.47111 * 59.99819 * 17 15 13 19 19 H 1.48505 * 109.47080 * 179.97438 * 17 15 13 20 20 H 1.48498 * 109.46991 * 299.99689 * 17 15 13 21 21 N 1.32854 * 120.03725 * 180.02562 * 4 3 2 22 22 H 1.09000 * 109.47540 * 299.99557 * 1 2 3 23 23 H 1.09000 * 109.47385 * 60.00328 * 1 2 3 24 24 H 1.09003 * 109.47023 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.47112 * 240.00122 * 2 1 3 26 26 H 1.08993 * 109.47103 * 120.00272 * 2 1 3 27 27 H 0.97001 * 120.00464 * 0.02562 * 3 2 1 28 28 H 0.97007 * 120.00142 * 179.97438 * 10 9 8 29 29 H 1.09001 * 109.46528 * 300.00120 * 11 10 9 30 30 H 1.08995 * 109.47057 * 59.99377 * 11 10 9 31 31 H 1.08995 * 109.47264 * 299.99154 * 12 11 10 32 32 H 1.08995 * 109.47645 * 59.99745 * 12 11 10 33 33 H 0.96998 * 120.00729 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0182 1.3812 0.0000 4 6 3.3750 1.6335 0.0005 5 7 4.2405 0.6224 0.0005 6 6 5.5412 0.8635 0.0016 7 17 6.6669 -0.4582 0.0022 8 7 5.9861 2.1095 0.0031 9 6 5.1258 3.1246 0.0031 10 7 5.5906 4.4239 0.0042 11 6 7.0319 4.6864 0.0059 12 6 7.2752 6.1968 0.0061 13 6 8.7579 6.4668 0.0073 14 1 9.4566 5.6433 0.0081 15 6 9.2222 7.7650 0.0082 16 7 8.3713 8.7677 0.0076 17 14 11.0600 8.0995 0.0103 18 1 11.6738 7.4998 -1.2017 19 1 11.2963 9.5657 0.0105 20 1 11.6711 7.4991 1.2233 21 7 3.8185 2.8858 0.0010 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 1.8933 -0.5138 -0.8900 26 1 1.8933 -0.5138 0.8899 27 1 1.3879 2.1185 0.0004 28 1 4.9629 5.1636 0.0038 29 1 7.4803 4.2455 0.8962 30 1 7.4823 4.2463 -0.8837 31 1 6.8269 6.6373 -0.8844 32 1 6.8247 6.6374 0.8955 33 1 8.6980 9.6811 0.0079 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071776578.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:50:08 Heat of formation + Delta-G solvation = 57.609800 kcal Electronic energy + Delta-G solvation = -17627.950027 eV Core-core repulsion = 14556.916922 eV Total energy + Delta-G solvation = -3071.033105 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.089 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.30893 -37.38058 -37.06267 -35.87545 -33.53954 -33.20277 -32.11302 -30.06458 -29.31167 -25.09810 -24.49918 -23.54245 -22.21184 -21.11523 -18.63591 -18.53345 -16.64235 -16.07840 -16.06036 -15.39433 -15.04236 -14.95264 -14.51585 -14.02101 -13.96263 -13.82352 -12.74355 -12.69606 -12.28925 -12.23979 -12.13441 -11.48858 -11.43095 -11.25805 -10.96231 -10.67187 -10.54164 -10.17584 -9.68413 -9.51663 -9.43122 -9.30253 -8.68280 -8.47469 -8.15128 -6.10923 -4.14365 1.09892 1.33447 1.50366 2.62199 3.23865 3.30729 3.34813 3.38728 4.04633 4.33292 4.43821 4.50403 4.74292 4.81250 5.05149 5.26225 5.41407 5.61475 5.62975 5.78338 6.18069 6.28239 6.34108 6.47433 6.68187 7.02449 7.20050 7.29561 7.56097 7.56958 7.84443 7.88105 8.24515 8.62001 8.91176 9.50586 11.00686 Molecular weight = 271.09amu Principal moments of inertia in cm(-1) A = 0.026085 B = 0.003635 C = 0.003202 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1073.166556 B = 7700.475886 C = 8742.592435 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.131 3.869 3 N -0.688 5.688 4 C 0.638 3.362 5 N -0.636 5.636 6 C 0.474 3.526 7 Cl 0.026 6.974 8 N -0.616 5.616 9 C 0.639 3.361 10 N -0.664 5.664 11 C 0.132 3.868 12 C 0.012 3.988 13 C -0.522 4.522 14 H 0.061 0.939 15 C 0.060 3.940 16 N -0.894 5.894 17 Si 0.898 3.102 18 H -0.275 1.275 19 H -0.287 1.287 20 H -0.275 1.275 21 N -0.656 5.656 22 H 0.062 0.938 23 H 0.062 0.938 24 H 0.076 0.924 25 H 0.069 0.931 26 H 0.069 0.931 27 H 0.416 0.584 28 H 0.417 0.583 29 H 0.063 0.937 30 H 0.063 0.937 31 H 0.024 0.976 32 H 0.024 0.976 33 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.494 -17.171 -0.011 21.839 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C 0.007 3.993 3 N -0.327 5.327 4 C 0.273 3.727 5 N -0.376 5.376 6 C 0.168 3.832 7 Cl 0.054 6.946 8 N -0.355 5.355 9 C 0.274 3.726 10 N -0.297 5.297 11 C 0.010 3.990 12 C -0.026 4.026 13 C -0.561 4.561 14 H 0.079 0.921 15 C -0.142 4.142 16 N -0.532 5.532 17 Si 0.726 3.274 18 H -0.201 1.201 19 H -0.213 1.213 20 H -0.201 1.201 21 N -0.398 5.398 22 H 0.081 0.919 23 H 0.081 0.919 24 H 0.095 0.905 25 H 0.088 0.912 26 H 0.088 0.912 27 H 0.254 0.746 28 H 0.255 0.745 29 H 0.081 0.919 30 H 0.081 0.919 31 H 0.042 0.958 32 H 0.042 0.958 33 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -13.233 -17.150 -0.011 21.662 hybrid contribution 0.609 0.730 0.001 0.951 sum -12.624 -16.420 -0.010 20.711 Atomic orbital electron populations 1.22026 0.94375 1.03308 1.02681 1.21309 0.93766 0.81404 1.02833 1.44093 1.00798 1.09276 1.78524 1.18769 0.86837 0.83289 0.83810 1.67896 1.02010 1.35887 1.31828 1.22392 0.86226 0.87455 0.87115 1.98430 1.57943 1.42479 1.95748 1.68044 1.39482 0.98285 1.29639 1.18993 0.82858 0.87293 0.83415 1.44933 1.10408 1.01103 1.73245 1.21922 0.75135 1.00482 1.01496 1.19347 0.97867 0.87273 0.98079 1.20965 0.91101 0.92287 1.51728 0.92114 1.24992 0.98161 0.96165 0.94916 1.69944 1.34226 0.98962 1.50092 0.86556 0.85020 0.77056 0.78811 1.20068 1.21256 1.20063 1.68023 1.15698 1.21911 1.34151 0.91889 0.91894 0.90499 0.91227 0.91229 0.74586 0.74527 0.91881 0.91882 0.95792 0.95791 0.92729 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.85 10.03 37.16 0.37 -0.48 16 2 C 0.13 1.06 6.40 -4.04 -0.03 1.03 16 3 N -0.69 -7.35 5.69 -62.19 -0.35 -7.71 16 4 C 0.64 9.56 8.47 -322.15 -2.73 6.83 16 5 N -0.64 -9.85 9.70 -12.42 -0.12 -9.97 16 6 C 0.47 7.80 8.25 -91.29 -0.75 7.05 16 7 Cl 0.03 0.36 29.30 -51.86 -1.52 -1.16 16 8 N -0.62 -11.33 9.70 -12.42 -0.12 -11.45 16 9 C 0.64 11.66 8.47 -322.15 -2.73 8.93 16 10 N -0.66 -12.13 5.69 -62.19 -0.35 -12.49 16 11 C 0.13 2.72 5.62 -4.04 -0.02 2.69 16 12 C 0.01 0.29 5.09 -27.88 -0.14 0.15 16 13 C -0.52 -14.23 9.11 -34.44 -0.31 -14.55 16 14 H 0.06 1.61 7.74 -52.49 -0.41 1.20 16 15 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 16 N -0.89 -25.99 13.29 55.43 0.74 -25.25 16 17 Si 0.90 21.19 29.54 -169.99 -5.02 16.17 16 18 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 19 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 20 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 21 N -0.66 -10.96 10.57 -14.76 -0.16 -11.12 16 22 H 0.06 0.31 8.14 -51.93 -0.42 -0.11 16 23 H 0.06 0.31 8.14 -51.93 -0.42 -0.11 16 24 H 0.08 0.31 8.14 -51.93 -0.42 -0.12 16 25 H 0.07 0.60 8.14 -51.93 -0.42 0.18 16 26 H 0.07 0.60 8.14 -51.93 -0.42 0.18 16 27 H 0.42 3.75 8.59 -40.82 -0.35 3.40 16 28 H 0.42 7.08 8.59 -40.82 -0.35 6.73 16 29 H 0.06 1.33 8.14 -51.93 -0.42 0.91 16 30 H 0.06 1.33 8.14 -51.93 -0.42 0.91 16 31 H 0.02 0.61 8.14 -51.93 -0.42 0.19 16 32 H 0.02 0.61 8.14 -51.93 -0.42 0.19 16 33 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 308.21 15.07 4.64 4.64 Total: -1.00 -30.20 308.21 -12.75 -42.95 By element: Atomic # 1 Polarization: 6.21 SS G_CDS: -4.05 Total: 2.16 kcal Atomic # 6 Polarization: 19.66 SS G_CDS: -6.44 Total: 13.22 kcal Atomic # 7 Polarization: -77.62 SS G_CDS: -0.37 Total: -77.99 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -5.02 Total: 16.17 kcal Atomic # 17 Polarization: 0.36 SS G_CDS: -1.52 Total: -1.16 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -30.20 -12.75 -42.95 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071776578.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.559 kcal (2) G-P(sol) polarization free energy of solvation -30.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.949 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds