Wall clock time and date at job start Mon Mar 30 2020 05:00:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47163 * 36.64168 * 3 2 1 5 5 C 1.36755 * 120.00467 * 263.83478 * 4 3 2 6 6 H 1.07998 * 120.00192 * 200.39855 * 5 4 3 7 7 C 1.39086 * 119.99816 * 20.39740 * 5 4 3 8 8 N 1.31350 * 120.00017 * 21.47025 * 7 5 4 9 9 Si 1.86795 * 119.99908 * 201.46240 * 7 5 4 10 10 H 1.48499 * 109.47205 * 0.02562 * 9 7 5 11 11 H 1.48507 * 109.47083 * 120.00306 * 9 7 5 12 12 H 1.48501 * 109.47351 * 240.00156 * 9 7 5 13 13 C 1.34786 * 119.99464 * 83.83792 * 4 3 2 14 14 O 1.21785 * 119.99335 * 179.97438 * 13 4 3 15 15 C 1.41732 * 120.00250 * 359.97438 * 13 4 3 16 16 C 1.35197 * 119.99959 * 180.02562 * 15 13 4 17 17 C 1.46873 * 119.99692 * 179.72282 * 16 15 13 18 18 C 1.40058 * 120.09829 * 359.72677 * 17 16 15 19 19 C 1.37096 * 119.90179 * 179.71614 * 18 17 16 20 20 C 1.39258 * 120.09458 * 0.57659 * 19 18 17 21 21 N 1.39120 * 119.90254 * 179.69376 * 20 19 18 22 22 C 1.39254 * 120.19428 * 359.68038 * 20 19 18 23 23 C 1.37095 * 120.09724 * 0.03740 * 22 20 19 24 24 H 1.09003 * 109.46733 * 276.64322 * 3 2 1 25 25 H 1.08992 * 109.47111 * 156.64553 * 3 2 1 26 26 H 0.96996 * 119.99972 * 180.02562 * 8 7 5 27 27 H 1.08004 * 120.00047 * 359.72351 * 15 13 4 28 28 H 1.07996 * 120.00268 * 359.72263 * 16 15 13 29 29 H 1.08002 * 120.05079 * 359.97438 * 18 17 16 30 30 H 1.07992 * 119.95307 * 180.27819 * 19 18 17 31 31 H 0.96998 * 120.00080 * 179.97438 * 21 20 19 32 32 H 0.97003 * 119.99624 * 359.97438 * 21 20 19 33 33 H 1.07998 * 119.94981 * 180.02562 * 22 20 19 34 34 H 1.07994 * 120.04558 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0968 -1.1074 -0.8243 5 6 3.4452 -2.2932 -0.2390 6 1 4.0971 -2.9805 -0.7578 7 6 2.9600 -2.6142 1.0243 8 7 1.8751 -2.0299 1.4791 9 14 3.8511 -3.8765 2.0740 10 1 5.0372 -4.3836 1.3383 11 1 4.2901 -3.2432 3.3436 12 1 2.9348 -5.0056 2.3751 13 6 3.2032 -0.9579 -2.1596 14 8 3.6100 -1.8789 -2.8448 15 6 2.8417 0.2709 -2.7663 16 6 2.9480 0.4206 -4.1057 17 6 2.5676 1.6920 -4.7350 18 6 2.0891 2.7487 -3.9501 19 6 1.7406 3.9357 -4.5410 20 6 1.8505 4.0875 -5.9209 21 7 1.4898 5.2916 -6.5171 22 6 2.3207 3.0377 -6.7058 23 6 2.6768 1.8492 -6.1225 24 1 2.9713 -0.1181 1.0208 25 1 2.9709 0.9442 -0.4074 26 1 1.5369 -2.2535 2.3603 27 1 2.4767 1.0862 -2.1591 28 1 3.3126 -0.3947 -4.7130 29 1 1.9987 2.6301 -2.8804 30 1 1.3759 4.7525 -3.9360 31 1 1.5661 5.3991 -7.4781 32 1 1.1620 6.0238 -5.9717 33 1 2.4047 3.1599 -7.7755 34 1 3.0418 1.0358 -6.7319 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000134721791.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:00:43 Heat of formation + Delta-G solvation = 50.192619 kcal Electronic energy + Delta-G solvation = -19309.526308 eV Core-core repulsion = 16208.311669 eV Total energy + Delta-G solvation = -3101.214640 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.106 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -39.45580 -38.81170 -35.86892 -35.17904 -34.29253 -32.32082 -31.72701 -30.94375 -28.12916 -27.36696 -25.15931 -23.17601 -22.59125 -20.66621 -18.32334 -17.84553 -17.47958 -16.95667 -16.42639 -16.27038 -15.09948 -14.78190 -14.38668 -13.90738 -13.69034 -13.48665 -13.33591 -13.23480 -12.96934 -12.82978 -12.06839 -11.81860 -11.58032 -11.45427 -11.22211 -11.12812 -11.07178 -10.69785 -10.56007 -10.38562 -10.29402 -9.30132 -9.02007 -8.95596 -8.56348 -8.02337 -7.17072 -6.54689 -3.96587 1.03463 1.54004 2.48884 3.12728 3.21873 3.28581 3.69590 3.73351 3.96675 4.03434 4.13030 4.41800 4.82477 4.90123 4.95656 4.99094 5.21580 5.34316 5.45379 5.52934 5.63600 5.80553 5.99472 6.12799 6.17300 6.26917 6.45525 6.47352 6.55953 6.86713 6.93861 7.13066 7.38690 7.43599 7.57202 7.98189 8.31148 8.77518 9.02744 9.19204 9.81703 10.50890 Molecular weight = 271.11amu Principal moments of inertia in cm(-1) A = 0.034178 B = 0.004066 C = 0.003736 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 819.032409 B = 6884.660888 C = 7492.332640 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.470 5.470 2 C 0.244 3.756 3 C 0.220 3.780 4 N -0.433 5.433 5 C -0.306 4.306 6 H 0.111 0.889 7 C 0.030 3.970 8 N -0.868 5.868 9 Si 0.928 3.072 10 H -0.265 1.265 11 H -0.278 1.278 12 H -0.282 1.282 13 C 0.478 3.522 14 O -0.585 6.585 15 C -0.192 4.192 16 C -0.051 4.051 17 C -0.113 4.113 18 C -0.057 4.057 19 C -0.199 4.199 20 C 0.213 3.787 21 N -0.878 5.878 22 C -0.201 4.201 23 C -0.055 4.055 24 H 0.123 0.877 25 H 0.087 0.913 26 H 0.274 0.726 27 H 0.114 0.886 28 H 0.129 0.871 29 H 0.126 0.874 30 H 0.119 0.881 31 H 0.396 0.604 32 H 0.397 0.603 33 H 0.118 0.882 34 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.288 14.313 -9.377 17.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.074 4.074 3 C 0.092 3.908 4 N -0.151 5.151 5 C -0.433 4.433 6 H 0.128 0.872 7 C -0.174 4.174 8 N -0.506 5.506 9 Si 0.754 3.246 10 H -0.189 1.189 11 H -0.204 1.204 12 H -0.208 1.208 13 C 0.272 3.728 14 O -0.471 6.471 15 C -0.213 4.213 16 C -0.073 4.073 17 C -0.115 4.115 18 C -0.076 4.076 19 C -0.221 4.221 20 C 0.108 3.892 21 N -0.416 5.416 22 C -0.224 4.224 23 C -0.073 4.073 24 H 0.141 0.859 25 H 0.105 0.895 26 H 0.085 0.915 27 H 0.132 0.868 28 H 0.147 0.853 29 H 0.144 0.856 30 H 0.137 0.863 31 H 0.224 0.776 32 H 0.224 0.776 33 H 0.136 0.864 34 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.719 13.783 -9.464 16.735 hybrid contribution 0.399 -0.272 0.664 0.821 sum 1.119 13.511 -8.801 16.163 Atomic orbital electron populations 1.80884 1.13564 1.10392 1.10115 1.29254 0.95328 0.91160 0.91653 1.18741 0.81719 0.90413 0.99887 1.43615 1.55128 1.11872 1.04502 1.19808 1.27032 0.96856 0.99621 0.87172 1.25379 0.94874 0.98706 0.98488 1.69838 1.17756 1.43543 1.19462 0.85836 0.79666 0.79791 0.79325 1.18948 1.20388 1.20818 1.16874 0.85182 0.88727 0.82055 1.90664 1.51472 1.43471 1.61534 1.22207 1.04625 0.98360 0.96089 1.22110 0.95653 0.94660 0.94835 1.18922 1.04830 0.94545 0.93214 1.21089 0.94894 0.91790 0.99840 1.20378 1.09785 0.99335 0.92616 1.17903 0.92826 0.86361 0.92115 1.42364 1.75309 1.13670 1.10274 1.20348 1.09049 0.93897 0.99093 1.20981 0.96092 0.96484 0.93790 0.85891 0.89493 0.91514 0.86825 0.85290 0.85588 0.86291 0.77614 0.77551 0.86389 0.85709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -11.34 18.54 42.15 0.78 -10.56 16 2 C 0.24 5.48 13.13 -20.76 -0.27 5.20 16 3 C 0.22 4.41 4.79 -6.83 -0.03 4.38 16 4 N -0.43 -10.37 2.59 -121.16 -0.31 -10.68 16 5 C -0.31 -7.96 9.26 -15.04 -0.14 -8.10 16 6 H 0.11 3.03 7.42 -52.49 -0.39 2.64 16 7 C 0.03 0.75 4.83 -17.44 -0.08 0.66 16 8 N -0.87 -22.01 9.59 55.50 0.53 -21.48 16 9 Si 0.93 19.54 29.60 -169.99 -5.03 14.51 16 10 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 11 H -0.28 -5.67 7.11 56.52 0.40 -5.27 16 12 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 13 C 0.48 11.41 7.34 -14.92 -0.11 11.30 16 14 O -0.59 -15.97 15.78 5.11 0.08 -15.89 16 15 C -0.19 -3.67 8.30 -39.33 -0.33 -4.00 16 16 C -0.05 -0.89 9.41 -37.17 -0.35 -1.24 16 17 C -0.11 -1.67 5.87 -105.04 -0.62 -2.29 16 18 C -0.06 -0.78 9.38 -39.31 -0.37 -1.15 16 19 C -0.20 -2.34 9.85 -39.62 -0.39 -2.73 16 20 C 0.21 2.30 6.76 -83.80 -0.57 1.73 16 21 N -0.88 -6.40 9.06 32.44 0.29 -6.10 16 22 C -0.20 -2.25 9.85 -39.62 -0.39 -2.64 16 23 C -0.05 -0.70 9.76 -39.31 -0.38 -1.08 16 24 H 0.12 2.47 6.63 -51.93 -0.34 2.13 16 25 H 0.09 1.34 6.45 -51.93 -0.34 1.01 16 26 H 0.27 6.69 8.31 -40.82 -0.34 6.35 16 27 H 0.11 1.89 4.08 -52.48 -0.21 1.68 16 28 H 0.13 2.33 7.45 -52.49 -0.39 1.94 16 29 H 0.13 1.63 6.16 -52.49 -0.32 1.31 16 30 H 0.12 1.15 8.06 -52.49 -0.42 0.73 16 31 H 0.40 2.14 8.83 -40.82 -0.36 1.77 16 32 H 0.40 2.23 8.83 -40.82 -0.36 1.87 16 33 H 0.12 1.04 8.06 -52.49 -0.42 0.62 16 34 H 0.12 1.39 8.06 -52.49 -0.42 0.97 16 LS Contribution 303.33 15.07 4.57 4.57 Total: -1.00 -32.48 303.33 -6.24 -38.72 By element: Atomic # 1 Polarization: 9.98 SS G_CDS: -3.12 Total: 6.85 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: -4.03 Total: 0.06 kcal Atomic # 7 Polarization: -50.11 SS G_CDS: 1.29 Total: -48.82 kcal Atomic # 8 Polarization: -15.97 SS G_CDS: 0.08 Total: -15.89 kcal Atomic # 14 Polarization: 19.54 SS G_CDS: -5.03 Total: 14.51 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -32.48 -6.24 -38.72 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000134721791.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.913 kcal (2) G-P(sol) polarization free energy of solvation -32.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.720 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds