Wall clock time and date at job start Mon Mar 30 2020 04:49:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.08994 * 109.47083 * 2 1 4 4 Cl 1.80307 * 109.47028 * 119.99846 * 2 1 3 5 5 C 1.50698 * 109.47145 * 239.99563 * 2 1 3 6 6 N 1.31419 * 119.33510 * 285.00350 * 5 2 1 7 7 C 1.34678 * 120.30599 * 179.97438 * 6 5 2 8 8 N 1.31263 * 120.48529 * 180.02562 * 7 6 5 9 9 N 1.38215 * 119.03614 * 359.97438 * 7 6 5 10 10 H 0.97001 * 120.62680 * 179.97438 * 9 7 6 11 11 C 1.36516 * 118.74007 * 0.27769 * 9 7 6 12 12 N 1.36541 * 120.19200 * 179.72461 * 11 9 7 13 13 C 1.46502 * 119.99431 * 359.97438 * 12 11 9 14 14 C 1.46494 * 120.00086 * 179.97438 * 12 11 9 15 15 C 1.50703 * 109.47203 * 90.00158 * 14 12 11 16 16 H 1.07997 * 120.00033 * 359.97438 * 15 14 12 17 17 C 1.37876 * 119.99771 * 179.97438 * 15 14 12 18 18 N 1.31512 * 119.99937 * 359.97438 * 17 15 14 19 19 Si 1.86798 * 119.99670 * 179.97438 * 17 15 14 20 20 H 1.48497 * 109.47439 * 359.97438 * 19 17 15 21 21 H 1.48503 * 109.47317 * 120.00019 * 19 17 15 22 22 H 1.48503 * 109.47275 * 239.99636 * 19 17 15 23 23 N 1.32347 * 119.61985 * 359.43898 * 11 9 7 24 24 H 1.08994 * 109.47083 * 179.97438 * 1 2 3 25 25 H 1.08994 * 109.47120 * 300.00336 * 1 2 3 26 26 H 1.09001 * 109.46450 * 60.00159 * 1 2 3 27 27 H 0.96991 * 119.99727 * 359.97438 * 8 7 6 28 28 H 1.08997 * 109.47497 * 90.00286 * 13 12 11 29 29 H 1.09008 * 109.46774 * 210.00059 * 13 12 11 30 30 H 1.09003 * 109.47595 * 329.99752 * 13 12 11 31 31 H 1.09003 * 109.46820 * 209.99499 * 14 12 11 32 32 H 1.08999 * 109.47398 * 329.99865 * 14 12 11 33 33 H 0.97004 * 119.99658 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 17 2.1311 -0.8499 1.4722 5 6 2.0324 -0.7105 -1.2304 6 7 1.9674 -2.0218 -1.2883 7 6 2.4102 -2.6767 -2.3786 8 7 2.3465 -3.9863 -2.4404 9 7 2.9318 -1.9497 -3.4321 10 1 3.2576 -2.3978 -4.2283 11 6 2.9854 -0.5896 -3.3282 12 7 3.5000 0.1573 -4.3488 13 6 3.9972 -0.5008 -5.5595 14 6 3.5550 1.6167 -4.2330 15 6 4.8664 2.0222 -3.6110 16 1 5.5866 1.2683 -3.3297 17 6 5.1466 3.3558 -3.4012 18 7 4.2697 4.2739 -3.7443 19 14 6.7718 3.8585 -2.6296 20 1 7.5769 2.6455 -2.3367 21 1 7.5172 4.7326 -3.5706 22 1 6.5132 4.5970 -1.3675 23 7 2.5304 0.0013 -2.2348 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5139 0.8899 26 1 -0.3632 0.5138 -0.8900 27 1 1.9788 -4.4895 -1.6972 28 1 3.1857 -0.5954 -6.2810 29 1 4.8009 0.0946 -5.9927 30 1 4.3750 -1.4913 -5.3057 31 1 3.4693 2.0632 -5.2237 32 1 2.7331 1.9627 -3.6062 33 1 4.4670 5.2121 -3.5970 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000380971772.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:49:06 Heat of formation + Delta-G solvation = 74.812674 kcal Electronic energy + Delta-G solvation = -18778.966100 eV Core-core repulsion = 15708.678968 eV Total energy + Delta-G solvation = -3070.287132 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.089 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.03608 -37.39754 -36.19589 -35.00108 -33.54431 -32.53107 -31.74982 -30.27837 -28.15164 -26.73151 -24.79412 -23.68106 -21.46477 -20.86986 -18.68911 -18.18175 -16.92175 -16.67970 -15.47289 -15.31859 -15.05916 -14.60657 -14.40070 -13.95408 -13.75772 -13.25376 -12.45850 -12.26030 -12.00357 -11.66448 -11.61262 -11.52079 -11.15842 -11.00850 -10.99075 -10.76905 -10.39579 -10.31321 -10.16912 -9.84542 -9.31960 -8.88727 -8.62560 -8.30210 -7.44821 -6.25723 -4.31749 1.13888 2.23078 2.45693 2.55041 3.18556 3.27806 3.30639 3.39381 4.04640 4.20797 4.28992 4.70779 5.02937 5.06175 5.10011 5.25963 5.41548 5.60024 5.66833 5.80433 5.87675 5.93549 6.06414 6.21135 6.52756 6.95618 7.09638 7.31512 7.55772 7.72223 7.85922 7.92335 8.55632 8.69920 8.91989 9.34159 10.82040 Molecular weight = 271.09amu Principal moments of inertia in cm(-1) A = 0.015582 B = 0.006847 C = 0.005412 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1796.560453 B = 4088.435215 C = 5172.013389 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.066 3.934 3 H 0.131 0.869 4 Cl -0.157 7.157 5 C 0.423 3.577 6 N -0.624 5.624 7 C 0.571 3.429 8 N -0.783 5.783 9 N -0.666 5.666 10 H 0.415 0.585 11 C 0.672 3.328 12 N -0.549 5.549 13 C 0.075 3.925 14 C 0.252 3.748 15 C -0.532 4.532 16 H 0.059 0.941 17 C 0.068 3.932 18 N -0.890 5.890 19 Si 0.899 3.101 20 H -0.274 1.274 21 H -0.283 1.283 22 H -0.280 1.280 23 N -0.617 5.617 24 H 0.073 0.927 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.352 0.648 28 H 0.063 0.937 29 H 0.097 0.903 30 H 0.059 0.941 31 H 0.043 0.957 32 H 0.063 0.937 33 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.956 -6.101 0.825 7.904 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C 0.021 3.979 3 H 0.149 0.851 4 Cl -0.130 7.130 5 C 0.144 3.856 6 N -0.364 5.364 7 C 0.200 3.800 8 N -0.426 5.426 9 N -0.303 5.303 10 H 0.254 0.746 11 C 0.314 3.686 12 N -0.258 5.258 13 C -0.069 4.069 14 C 0.134 3.866 15 C -0.571 4.571 16 H 0.077 0.923 17 C -0.135 4.135 18 N -0.528 5.528 19 Si 0.726 3.274 20 H -0.198 1.198 21 H -0.209 1.209 22 H -0.206 1.206 23 N -0.361 5.361 24 H 0.092 0.908 25 H 0.096 0.904 26 H 0.095 0.905 27 H 0.170 0.830 28 H 0.081 0.919 29 H 0.115 0.885 30 H 0.078 0.922 31 H 0.061 0.939 32 H 0.081 0.919 33 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -4.903 -6.337 0.759 8.048 hybrid contribution 1.150 -0.042 0.265 1.181 sum -3.752 -6.379 1.023 7.471 Atomic orbital electron populations 1.22042 0.90759 1.04048 1.03566 1.22555 0.97026 0.97187 0.81173 0.85109 1.98721 1.90219 1.82015 1.42093 1.22495 0.84182 0.87517 0.91425 1.70094 1.32206 1.09632 1.24501 1.19963 0.88062 0.91082 0.80909 1.69713 1.34892 1.00982 1.36980 1.43363 1.60083 1.05757 1.21115 0.74581 1.19146 0.83757 0.77718 0.88015 1.47111 1.56286 1.09943 1.12495 1.21924 1.00625 0.97942 0.86374 1.19712 0.99551 0.68565 0.98774 1.21311 1.01678 0.92258 1.41847 0.92325 1.24857 0.97289 0.96176 0.95193 1.69916 1.34777 1.01070 1.47015 0.86430 0.83165 0.78630 0.79161 1.19829 1.20874 1.20609 1.68619 1.29818 1.36115 1.01569 0.90771 0.90429 0.90498 0.83034 0.91865 0.88467 0.92188 0.93887 0.91882 0.92457 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.78 9.30 37.16 0.35 -1.43 16 2 C 0.07 1.01 3.76 -27.88 -0.10 0.91 16 3 H 0.13 1.97 8.12 -51.93 -0.42 1.55 16 4 Cl -0.16 -2.42 28.24 -51.86 -1.46 -3.88 16 5 C 0.42 7.71 6.52 -156.65 -1.02 6.69 16 6 N -0.62 -11.63 9.98 -11.47 -0.11 -11.75 16 7 C 0.57 10.56 8.78 -321.77 -2.82 7.74 16 8 N -0.78 -14.18 14.19 29.90 0.42 -13.75 16 9 N -0.67 -11.10 5.35 -14.36 -0.08 -11.17 16 10 H 0.41 5.81 6.73 -40.82 -0.27 5.53 16 11 C 0.67 12.41 8.23 -320.26 -2.64 9.78 16 12 N -0.55 -9.78 2.90 -184.75 -0.54 -10.32 16 13 C 0.07 0.96 10.25 59.85 0.61 1.57 16 14 C 0.25 5.53 5.16 -5.20 -0.03 5.50 16 15 C -0.53 -13.23 9.39 -34.44 -0.32 -13.55 16 16 H 0.06 1.50 7.81 -52.49 -0.41 1.09 16 17 C 0.07 1.75 5.46 -17.82 -0.10 1.65 16 18 N -0.89 -23.72 13.29 55.43 0.74 -22.98 16 19 Si 0.90 20.22 29.54 -169.99 -5.02 15.20 16 20 H -0.27 -6.19 7.11 56.52 0.40 -5.79 16 21 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 22 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 23 N -0.62 -12.23 9.05 -11.22 -0.10 -12.33 16 24 H 0.07 0.94 8.14 -51.93 -0.42 0.51 16 25 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 26 H 0.08 0.92 8.14 -51.93 -0.42 0.49 16 27 H 0.35 6.12 8.91 -40.82 -0.36 5.76 16 28 H 0.06 0.66 8.14 -51.93 -0.42 0.24 16 29 H 0.10 1.24 8.07 -51.92 -0.42 0.82 16 30 H 0.06 0.65 6.43 -51.93 -0.33 0.31 16 31 H 0.04 0.96 8.07 -51.93 -0.42 0.54 16 32 H 0.06 1.53 7.35 -51.93 -0.38 1.14 16 33 H 0.27 6.74 8.31 -40.82 -0.34 6.40 16 LS Contribution 303.07 15.07 4.57 4.57 Total: -1.00 -28.89 303.07 -11.51 -40.40 By element: Atomic # 1 Polarization: 11.01 SS G_CDS: -3.85 Total: 7.16 kcal Atomic # 6 Polarization: 24.92 SS G_CDS: -6.08 Total: 18.85 kcal Atomic # 7 Polarization: -82.63 SS G_CDS: 0.33 Total: -82.30 kcal Atomic # 14 Polarization: 20.22 SS G_CDS: -5.02 Total: 15.20 kcal Atomic # 17 Polarization: -2.42 SS G_CDS: -1.46 Total: -3.88 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -28.89 -11.51 -40.40 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000380971772.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.216 kcal (2) G-P(sol) polarization free energy of solvation -28.892 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.324 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.403 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.813 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds