Wall clock time and date at job start Mon Mar 30 2020 04:49:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.08999 * 109.46965 * 2 1 4 4 Cl 1.80298 * 109.47425 * 239.99632 * 2 1 3 5 5 C 1.50704 * 109.46966 * 119.99513 * 2 1 3 6 6 N 1.30273 * 119.38671 * 304.98188 * 5 2 1 7 7 C 1.35654 * 121.26383 * 180.02562 * 6 5 2 8 8 N 1.30746 * 120.01065 * 180.02562 * 7 6 5 9 9 N 1.38375 * 119.97664 * 359.74390 * 7 6 5 10 10 H 0.96995 * 120.58623 * 180.25837 * 9 7 6 11 11 C 1.38074 * 118.82479 * 0.50498 * 9 7 6 12 12 N 1.30226 * 120.60606 * 179.78002 * 11 9 7 13 13 C 1.46505 * 119.99594 * 353.99652 * 12 11 9 14 14 C 1.53003 * 109.47046 * 116.07115 * 13 12 11 15 15 C 1.50705 * 109.46713 * 179.97438 * 14 13 12 16 16 H 1.07995 * 120.00050 * 359.97438 * 15 14 13 17 17 C 1.37871 * 119.99470 * 179.97438 * 15 14 13 18 18 N 1.31516 * 120.00536 * 359.97438 * 17 15 14 19 19 Si 1.86801 * 119.99759 * 179.97438 * 17 15 14 20 20 H 1.48499 * 109.47277 * 359.97438 * 19 17 15 21 21 H 1.48502 * 109.47104 * 119.99817 * 19 17 15 22 22 H 1.48496 * 109.47179 * 239.99841 * 19 17 15 23 23 N 1.36221 * 119.38618 * 125.00285 * 5 2 1 24 24 H 0.96999 * 120.04081 * 359.96093 * 23 5 2 25 25 H 1.09000 * 109.47148 * 300.00081 * 1 2 3 26 26 H 1.09004 * 109.46622 * 60.00327 * 1 2 3 27 27 H 1.08999 * 109.46965 * 179.97438 * 1 2 3 28 28 H 0.96993 * 120.00024 * 0.02562 * 8 7 6 29 29 H 1.08993 * 109.46824 * 356.06573 * 13 12 11 30 30 H 1.08999 * 109.46471 * 236.06707 * 13 12 11 31 31 H 1.08992 * 109.47267 * 59.99815 * 14 13 12 32 32 H 1.08998 * 109.46671 * 299.99390 * 14 13 12 33 33 H 0.97002 * 120.00100 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 17 2.1311 -0.8500 -1.4720 5 6 2.0323 -0.7103 1.2306 6 7 1.6318 -0.3146 2.4053 7 6 2.0601 -0.9260 3.5380 8 7 1.6419 -0.5089 4.7045 9 7 2.9351 -1.9950 3.4581 10 1 3.2440 -2.4411 4.2621 11 6 3.3646 -2.4122 2.2140 12 7 4.1913 -3.4118 2.0987 13 6 4.7766 -4.0200 3.2962 14 6 4.3052 -5.4709 3.4135 15 6 4.9077 -6.0967 4.6450 16 1 5.5618 -5.5177 5.2800 17 6 4.6239 -7.4084 4.9607 18 7 3.8271 -8.1134 4.1877 19 14 5.3714 -8.1844 6.4867 20 1 6.2260 -7.1880 7.1808 21 1 4.2864 -8.6275 7.3988 22 1 6.1962 -9.3549 6.0935 23 7 2.8970 -1.7540 1.0938 24 1 3.1838 -2.0344 0.2106 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3633 -1.0277 -0.0005 28 1 1.0251 0.2375 4.7600 29 1 4.4607 -3.4628 4.1780 30 1 5.8637 -3.9962 3.2213 31 1 4.6210 -6.0280 2.5316 32 1 3.2180 -5.4947 3.4883 33 1 3.6271 -9.0362 4.4101 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000381633670.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:49:09 Heat of formation + Delta-G solvation = 69.102157 kcal Electronic energy + Delta-G solvation = -18118.071828 eV Core-core repulsion = 15047.537069 eV Total energy + Delta-G solvation = -3070.534759 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.089 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.28493 -37.50315 -36.51086 -35.87039 -33.88645 -32.72304 -31.74537 -31.28417 -29.33344 -26.14108 -24.67068 -22.45266 -22.04431 -20.41290 -19.60331 -19.06722 -16.88469 -16.73159 -16.28019 -16.09634 -15.22279 -14.77355 -14.60290 -14.44878 -13.87967 -13.38505 -12.70965 -12.49481 -12.39300 -12.23448 -11.93076 -11.52925 -11.39265 -11.11127 -11.02479 -10.77742 -10.65015 -10.34548 -9.80860 -9.73802 -9.36073 -9.04202 -8.49572 -8.39916 -7.98867 -6.04301 -4.08486 0.80226 1.27091 2.17441 2.26065 2.91994 3.29932 3.31303 3.37333 3.41367 3.55014 4.21417 4.36289 4.42248 4.57321 5.07690 5.17131 5.21174 5.31816 5.40767 5.64107 5.86163 6.05904 6.39358 6.53323 6.64878 6.81228 7.03867 7.60844 7.69799 7.77189 7.93532 8.20600 8.32817 8.48298 8.98289 9.56233 11.06860 Molecular weight = 271.09amu Principal moments of inertia in cm(-1) A = 0.026851 B = 0.004030 C = 0.003690 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1042.535469 B = 6946.615637 C = 7585.802308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.042 3.958 3 H 0.145 0.855 4 Cl -0.146 7.146 5 C 0.437 3.563 6 N -0.579 5.579 7 C 0.563 3.437 8 N -0.733 5.733 9 N -0.680 5.680 10 H 0.436 0.564 11 C 0.560 3.440 12 N -0.571 5.571 13 C 0.071 3.929 14 C 0.031 3.969 15 C -0.526 4.526 16 H 0.058 0.942 17 C 0.060 3.940 18 N -0.892 5.892 19 Si 0.895 3.105 20 H -0.272 1.272 21 H -0.283 1.283 22 H -0.283 1.283 23 N -0.634 5.634 24 H 0.434 0.566 25 H 0.095 0.905 26 H 0.084 0.916 27 H 0.074 0.926 28 H 0.354 0.646 29 H 0.027 0.973 30 H 0.080 0.920 31 H 0.028 0.972 32 H 0.014 0.986 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.186 18.921 -11.461 22.970 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.004 4.004 3 H 0.163 0.837 4 Cl -0.120 7.120 5 C 0.158 3.842 6 N -0.315 5.315 7 C 0.190 3.810 8 N -0.368 5.368 9 N -0.331 5.331 10 H 0.281 0.719 11 C 0.194 3.806 12 N -0.302 5.302 13 C -0.058 4.058 14 C -0.007 4.007 15 C -0.564 4.564 16 H 0.076 0.924 17 C -0.142 4.142 18 N -0.530 5.530 19 Si 0.722 3.278 20 H -0.196 1.196 21 H -0.210 1.210 22 H -0.209 1.209 23 N -0.272 5.272 24 H 0.278 0.722 25 H 0.113 0.887 26 H 0.103 0.897 27 H 0.093 0.907 28 H 0.171 0.829 29 H 0.045 0.955 30 H 0.098 0.902 31 H 0.046 0.954 32 H 0.032 0.968 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -6.096 18.401 -10.764 22.172 hybrid contribution 0.476 -0.690 0.762 1.133 sum -5.619 17.711 -10.001 21.102 Atomic orbital electron populations 1.22115 0.88739 1.04861 1.04932 1.23100 0.99196 0.97920 0.80142 0.83714 1.98771 1.89923 1.81142 1.42137 1.22656 0.83284 0.83382 0.94889 1.69778 1.32142 1.33434 0.96134 1.19959 0.87523 0.85478 0.88003 1.69745 1.23722 1.23910 1.19437 1.43616 1.47260 1.33510 1.08724 0.71892 1.18995 0.92970 0.90420 0.78220 1.72347 1.15332 1.08557 1.33967 1.22218 0.98834 0.98240 0.86469 1.19111 0.96479 0.87548 0.97583 1.21183 1.29299 0.96972 1.08989 0.92417 1.25003 0.95094 0.97231 0.96891 1.69987 1.35959 1.09270 1.37827 0.86493 0.79052 0.79303 0.82913 1.19641 1.20950 1.20917 1.42563 1.44246 1.30563 1.09866 0.72191 0.88655 0.89717 0.90732 0.82865 0.95460 0.90199 0.95388 0.96767 0.92934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.78 9.17 37.16 0.34 -0.44 16 2 C 0.04 0.27 3.81 -27.88 -0.11 0.16 16 3 H 0.15 0.58 8.14 -51.93 -0.42 0.15 16 4 Cl -0.15 -1.06 26.58 -51.86 -1.38 -2.43 16 5 C 0.44 4.67 7.10 -154.52 -1.10 3.57 16 6 N -0.58 -7.38 9.94 -10.77 -0.11 -7.48 16 7 C 0.56 8.88 8.76 -320.86 -2.81 6.07 16 8 N -0.73 -11.80 14.16 30.04 0.43 -11.38 16 9 N -0.68 -11.45 5.40 -13.90 -0.08 -11.53 16 10 H 0.44 7.77 6.35 -40.82 -0.26 7.51 16 11 C 0.56 9.34 8.54 -318.53 -2.72 6.62 16 12 N -0.57 -11.06 10.62 -61.47 -0.65 -11.71 16 13 C 0.07 1.53 6.23 -4.04 -0.03 1.50 16 14 C 0.03 0.81 5.30 -27.88 -0.15 0.66 16 15 C -0.53 -14.91 9.11 -34.44 -0.31 -15.22 16 16 H 0.06 1.57 7.74 -52.49 -0.41 1.17 16 17 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 18 N -0.89 -27.07 13.29 55.43 0.74 -26.33 16 19 Si 0.89 21.75 29.54 -169.99 -5.02 16.73 16 20 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 21 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 22 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 23 N -0.63 -8.04 5.31 -10.43 -0.06 -8.10 16 24 H 0.43 4.93 6.67 -40.82 -0.27 4.65 16 25 H 0.09 0.53 7.94 -51.93 -0.41 0.12 16 26 H 0.08 0.28 8.14 -51.93 -0.42 -0.14 16 27 H 0.07 0.47 8.14 -51.93 -0.42 0.05 16 28 H 0.35 4.98 8.90 -40.82 -0.36 4.62 16 29 H 0.03 0.55 5.50 -51.93 -0.29 0.27 16 30 H 0.08 1.68 8.14 -51.93 -0.42 1.26 16 31 H 0.03 0.80 8.14 -51.93 -0.42 0.37 16 32 H 0.01 0.40 8.14 -51.93 -0.42 -0.02 16 33 H 0.26 7.44 8.31 -40.82 -0.34 7.10 16 LS Contribution 299.89 15.07 4.52 4.52 Total: -1.00 -32.67 299.89 -12.26 -44.92 By element: Atomic # 1 Polarization: 11.90 SS G_CDS: -3.67 Total: 8.23 kcal Atomic # 6 Polarization: 11.54 SS G_CDS: -6.98 Total: 4.56 kcal Atomic # 7 Polarization: -76.80 SS G_CDS: 0.27 Total: -76.53 kcal Atomic # 14 Polarization: 21.75 SS G_CDS: -5.02 Total: 16.73 kcal Atomic # 17 Polarization: -1.06 SS G_CDS: -1.38 Total: -2.43 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -32.67 -12.26 -44.92 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000381633670.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.027 kcal (2) G-P(sol) polarization free energy of solvation -32.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.925 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.102 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds