Wall clock time and date at job start Mon Mar 30 2020 04:49:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.08994 * 109.47608 * 2 1 4 4 Cl 1.80304 * 109.46886 * 119.99891 * 2 1 3 5 5 C 1.50702 * 109.46928 * 239.99607 * 2 1 3 6 6 N 1.30273 * 119.38695 * 305.02524 * 5 2 1 7 7 C 1.35654 * 121.26383 * 179.97438 * 6 5 2 8 8 N 1.30746 * 120.01065 * 180.02562 * 7 6 5 9 9 N 1.38375 * 119.97664 * 359.74390 * 7 6 5 10 10 H 0.96995 * 120.58623 * 180.25837 * 9 7 6 11 11 C 1.38074 * 118.82479 * 0.50498 * 9 7 6 12 12 N 1.30226 * 120.60606 * 179.78002 * 11 9 7 13 13 C 1.46502 * 119.99679 * 353.95467 * 12 11 9 14 14 C 1.52988 * 109.47574 * 116.10702 * 13 12 11 15 15 C 1.50699 * 109.47463 * 179.97438 * 14 13 12 16 16 H 1.07998 * 119.99788 * 0.02562 * 15 14 13 17 17 C 1.37876 * 120.00326 * 179.97438 * 15 14 13 18 18 N 1.31522 * 119.99781 * 0.02562 * 17 15 14 19 19 Si 1.86795 * 120.00276 * 180.02562 * 17 15 14 20 20 H 1.48493 * 109.47095 * 0.02562 * 19 17 15 21 21 H 1.48501 * 109.47192 * 120.00230 * 19 17 15 22 22 H 1.48499 * 109.47063 * 240.00145 * 19 17 15 23 23 N 1.36221 * 119.38594 * 125.00340 * 5 2 1 24 24 H 0.96998 * 120.04347 * 0.04422 * 23 5 2 25 25 H 1.08994 * 109.47574 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.46783 * 300.00473 * 1 2 3 27 27 H 1.08998 * 109.47040 * 59.99541 * 1 2 3 28 28 H 0.96993 * 120.00024 * 0.02562 * 8 7 6 29 29 H 1.09003 * 109.46987 * 356.10022 * 13 12 11 30 30 H 1.09006 * 109.46608 * 236.10458 * 13 12 11 31 31 H 1.09003 * 109.47518 * 59.99646 * 14 13 12 32 32 H 1.09001 * 109.47156 * 299.99995 * 14 13 12 33 33 H 0.96996 * 119.99811 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 17 2.1310 -0.8499 1.4722 5 6 2.0323 -0.7105 -1.2304 6 7 1.6311 -1.9254 -1.4756 7 6 2.0586 -2.6002 -2.5720 8 7 1.6398 -3.8187 -2.7945 9 7 2.9334 -1.9965 -3.4579 10 1 3.2418 -2.4694 -4.2466 11 6 3.3637 -0.7107 -3.1966 12 7 4.1903 -0.1111 -4.0048 13 6 4.7753 -0.8438 -5.1304 14 6 4.3046 -0.2195 -6.4454 15 6 4.9069 -0.9729 -7.6032 16 1 5.5599 -1.8133 -7.4195 17 6 4.6236 -0.5900 -8.8971 18 7 3.8280 0.4331 -9.1208 19 14 5.3697 -1.5243 -10.3323 20 1 6.2220 -2.6255 -9.8165 21 1 4.2840 -2.0910 -11.1720 22 1 6.1958 -0.5994 -11.1492 23 7 2.8970 -0.0702 -2.0659 24 1 3.1848 0.8344 -1.8665 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8899 28 1 1.0231 -4.2401 -2.1757 29 1 4.4590 -1.8861 -5.0892 30 1 5.8626 -0.7915 -5.0721 31 1 4.6209 0.8228 -6.4866 32 1 3.2174 -0.2717 -6.5037 33 1 3.6290 0.7027 -10.0311 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000381633672.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:49:11 Heat of formation + Delta-G solvation = 68.258610 kcal Electronic energy + Delta-G solvation = -18055.451995 eV Core-core repulsion = 14984.880657 eV Total energy + Delta-G solvation = -3070.571338 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.089 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.27963 -37.37784 -36.36964 -35.98247 -33.81749 -32.64388 -31.75968 -31.35577 -29.34883 -26.13328 -24.66004 -22.50924 -22.00313 -20.41235 -19.63190 -19.06776 -16.89499 -16.54385 -16.27923 -16.04626 -15.22835 -14.83934 -14.61562 -14.46329 -13.93096 -13.40965 -12.69031 -12.46758 -12.31507 -12.25655 -11.90499 -11.40950 -11.18044 -11.05076 -10.98502 -10.75812 -10.66105 -10.36211 -9.82237 -9.73143 -9.38141 -9.06431 -8.49491 -8.41424 -8.00411 -6.06019 -4.10069 0.60357 1.68518 2.22003 2.27937 2.91218 3.27256 3.28916 3.36424 3.40549 3.60907 4.07289 4.29164 4.40999 4.65576 5.04919 5.15933 5.22494 5.30211 5.39714 5.70664 5.84836 6.06091 6.37871 6.52245 6.60934 6.79733 7.03650 7.58930 7.67581 7.78186 7.91885 8.19010 8.31468 8.47814 8.96679 9.54728 11.05152 Molecular weight = 271.09amu Principal moments of inertia in cm(-1) A = 0.036225 B = 0.003635 C = 0.003516 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 772.756106 B = 7700.089555 C = 7962.720406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.044 3.956 3 H 0.127 0.873 4 Cl -0.133 7.133 5 C 0.431 3.569 6 N -0.562 5.562 7 C 0.559 3.441 8 N -0.730 5.730 9 N -0.680 5.680 10 H 0.436 0.564 11 C 0.563 3.437 12 N -0.574 5.574 13 C 0.071 3.929 14 C 0.031 3.969 15 C -0.526 4.526 16 H 0.058 0.942 17 C 0.059 3.941 18 N -0.892 5.892 19 Si 0.895 3.105 20 H -0.272 1.272 21 H -0.283 1.283 22 H -0.283 1.283 23 N -0.635 5.635 24 H 0.433 0.567 25 H 0.087 0.913 26 H 0.083 0.917 27 H 0.079 0.921 28 H 0.354 0.646 29 H 0.027 0.973 30 H 0.080 0.920 31 H 0.027 0.973 32 H 0.014 0.986 33 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.176 1.500 21.384 22.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.003 4.003 3 H 0.145 0.855 4 Cl -0.106 7.106 5 C 0.152 3.848 6 N -0.297 5.297 7 C 0.187 3.813 8 N -0.365 5.365 9 N -0.331 5.331 10 H 0.281 0.719 11 C 0.196 3.804 12 N -0.305 5.305 13 C -0.057 4.057 14 C -0.007 4.007 15 C -0.564 4.564 16 H 0.076 0.924 17 C -0.142 4.142 18 N -0.531 5.531 19 Si 0.723 3.277 20 H -0.196 1.196 21 H -0.209 1.209 22 H -0.209 1.209 23 N -0.271 5.271 24 H 0.273 0.727 25 H 0.106 0.894 26 H 0.101 0.899 27 H 0.098 0.902 28 H 0.172 0.828 29 H 0.045 0.955 30 H 0.098 0.902 31 H 0.046 0.954 32 H 0.032 0.968 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -6.109 0.924 20.700 21.603 hybrid contribution 0.499 -0.436 -0.916 1.130 sum -5.610 0.488 19.785 20.570 Atomic orbital electron populations 1.22104 0.89143 1.05588 1.03973 1.22857 0.99029 0.96552 0.81832 0.85509 1.98781 1.89836 1.81448 1.40550 1.22713 0.83611 0.89259 0.89190 1.69855 1.31236 1.07142 1.21418 1.19998 0.87631 0.90293 0.83425 1.69721 1.23400 1.06550 1.36804 1.43616 1.47272 1.14046 1.28174 0.71920 1.18955 0.92864 0.80265 0.88281 1.72332 1.15411 1.33111 1.09605 1.22207 0.98816 0.94272 0.90432 1.19104 0.96452 0.96960 0.88165 1.21185 1.29349 1.15081 0.90834 0.92421 1.25006 0.95089 0.95095 0.99051 1.69986 1.36020 1.26387 1.20673 0.86489 0.79053 0.79859 0.82345 1.19633 1.20948 1.20908 1.42237 1.44629 1.19390 1.20846 0.72685 0.89395 0.89857 0.90217 0.82764 0.95470 0.90236 0.95421 0.96795 0.92934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.81 9.17 37.16 0.34 -0.46 16 2 C 0.04 0.28 3.75 -27.88 -0.10 0.17 16 3 H 0.13 0.38 7.90 -51.93 -0.41 -0.03 16 4 Cl -0.13 -1.08 28.59 -51.86 -1.48 -2.56 16 5 C 0.43 4.46 6.56 -154.52 -1.01 3.45 16 6 N -0.56 -7.35 9.93 -10.77 -0.11 -7.45 16 7 C 0.56 8.88 8.76 -320.86 -2.81 6.07 16 8 N -0.73 -11.97 14.16 30.04 0.43 -11.54 16 9 N -0.68 -11.28 5.40 -13.90 -0.08 -11.36 16 10 H 0.44 7.71 6.35 -40.82 -0.26 7.45 16 11 C 0.56 8.92 8.54 -318.53 -2.72 6.20 16 12 N -0.57 -10.63 10.62 -61.47 -0.65 -11.28 16 13 C 0.07 1.51 6.23 -4.05 -0.03 1.48 16 14 C 0.03 0.81 5.30 -27.89 -0.15 0.66 16 15 C -0.53 -14.79 9.11 -34.44 -0.31 -15.11 16 16 H 0.06 1.56 7.74 -52.49 -0.41 1.16 16 17 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 18 N -0.89 -26.84 13.29 55.43 0.74 -26.10 16 19 Si 0.89 21.63 29.54 -169.99 -5.02 16.61 16 20 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 21 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 22 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 23 N -0.63 -7.09 5.42 -10.43 -0.06 -7.15 16 24 H 0.43 3.50 8.65 -40.82 -0.35 3.15 16 25 H 0.09 0.61 7.93 -51.93 -0.41 0.20 16 26 H 0.08 0.29 8.14 -51.93 -0.42 -0.13 16 27 H 0.08 0.40 8.14 -51.93 -0.42 -0.02 16 28 H 0.35 5.18 8.90 -40.82 -0.36 4.82 16 29 H 0.03 0.55 5.51 -51.93 -0.29 0.26 16 30 H 0.08 1.65 8.14 -51.93 -0.42 1.23 16 31 H 0.03 0.78 8.14 -51.93 -0.42 0.35 16 32 H 0.01 0.39 8.14 -51.93 -0.42 -0.04 16 33 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 LS Contribution 303.14 15.07 4.57 4.57 Total: -1.00 -33.25 303.14 -12.30 -45.54 By element: Atomic # 1 Polarization: 10.41 SS G_CDS: -3.74 Total: 6.67 kcal Atomic # 6 Polarization: 10.96 SS G_CDS: -6.89 Total: 4.07 kcal Atomic # 7 Polarization: -75.16 SS G_CDS: 0.27 Total: -74.89 kcal Atomic # 14 Polarization: 21.63 SS G_CDS: -5.02 Total: 16.61 kcal Atomic # 17 Polarization: -1.08 SS G_CDS: -1.48 Total: -2.56 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -33.25 -12.30 -45.54 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000381633672.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.802 kcal (2) G-P(sol) polarization free energy of solvation -33.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.554 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.295 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.544 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.259 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds