Wall clock time and date at job start Mon Mar 30 2020 04:52:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34232 * 116.99871 * 2 1 4 4 O 1.20823 * 119.99599 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99716 * 180.02562 * 3 2 1 6 6 N 1.46498 * 109.46750 * 179.97438 * 5 3 2 7 7 C 1.36809 * 120.00094 * 95.40392 * 6 5 3 8 8 H 1.08000 * 120.00725 * 222.67600 * 7 6 5 9 9 C 1.39073 * 119.99900 * 42.68022 * 7 6 5 10 10 N 1.31354 * 120.00151 * 17.66456 * 9 7 6 11 11 Si 1.86805 * 120.00071 * 197.66708 * 9 7 6 12 12 H 1.48500 * 109.47131 * 59.99784 * 11 9 7 13 13 H 1.48500 * 109.47188 * 179.97438 * 11 9 7 14 14 H 1.48501 * 109.47022 * 299.99658 * 11 9 7 15 15 C 1.34775 * 119.99915 * 275.12618 * 6 5 3 16 16 O 1.21652 * 119.99957 * 5.02087 * 15 6 5 17 17 C 1.47142 * 119.99880 * 185.01327 * 15 6 5 18 18 F 1.35093 * 120.00450 * 5.53445 * 17 15 6 19 19 C 1.33261 * 119.99994 * 185.53427 * 17 15 6 20 20 C 1.51409 * 136.31412 * 359.62508 * 19 17 15 21 21 C 1.53374 * 87.51802 * 206.06114 * 20 19 17 22 22 C 1.51401 * 136.31761 * 180.02562 * 19 17 15 23 23 H 1.08998 * 109.47137 * 60.00054 * 1 2 3 24 24 H 1.08999 * 109.46811 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.46859 * 299.99666 * 1 2 3 26 26 H 1.08997 * 109.47556 * 59.99998 * 5 3 2 27 27 H 1.09002 * 109.47116 * 299.99442 * 5 3 2 28 28 H 0.96998 * 119.99673 * 180.02562 * 10 9 7 29 29 H 1.08993 * 113.56288 * 320.64383 * 20 19 17 30 30 H 1.09000 * 113.55548 * 91.37987 * 20 19 17 31 31 H 1.08999 * 113.96944 * 220.29842 * 21 20 19 32 32 H 1.09002 * 113.59784 * 88.79477 * 21 20 19 33 33 H 1.09007 * 113.55749 * 268.62250 * 22 19 17 34 34 H 1.09001 * 113.56295 * 39.35770 * 22 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 7 3.9817 2.6797 -0.0011 7 6 4.2831 3.3044 1.1782 8 1 3.9344 4.3101 1.3612 9 6 5.0385 2.6444 2.1414 10 7 5.7485 1.5900 1.8104 11 14 5.0433 3.2572 3.9061 12 1 3.6608 3.2199 4.4468 13 1 5.9202 2.3868 4.7300 14 1 5.5525 4.6516 3.9444 15 6 4.0723 3.3552 -1.1638 16 8 3.7223 2.8277 -2.2026 17 6 4.5944 4.7308 -1.1767 18 9 5.0867 5.2772 -0.0435 19 6 4.5815 5.4378 -2.3063 20 6 4.1430 5.2077 -3.7370 21 6 5.1747 6.2637 -4.1528 22 6 5.0057 6.8271 -2.7333 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 3.9558 0.7809 -0.8908 27 1 3.9564 0.7806 0.8892 28 1 6.2751 1.1295 2.4824 29 1 4.3712 4.2084 -4.1074 30 1 3.1124 5.5057 -3.9300 31 1 4.8283 6.9362 -4.9376 32 1 6.1652 5.8528 -4.3482 33 1 4.2118 7.5696 -2.6508 34 1 5.9413 7.1554 -2.2807 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000819299938.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:52:20 Heat of formation + Delta-G solvation = -109.534041 kcal Electronic energy + Delta-G solvation = -21477.053079 eV Core-core repulsion = 17905.850196 eV Total energy + Delta-G solvation = -3571.202883 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 271.105 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -47.84896 -39.83183 -38.67305 -37.77810 -35.76307 -34.81140 -31.72189 -29.77358 -28.51784 -26.51570 -25.37640 -24.94653 -22.69622 -20.86799 -19.65273 -18.46133 -17.35941 -17.00516 -16.48496 -15.79220 -15.70523 -15.36851 -15.08932 -14.67029 -14.39967 -14.34889 -13.56751 -13.31876 -12.85397 -12.50686 -12.44110 -12.12707 -11.78455 -11.66164 -11.57362 -11.45392 -11.27849 -10.95748 -10.78915 -10.67819 -10.41038 -10.26303 -10.07168 -9.75829 -9.29389 -8.71675 -8.17379 -7.67907 -6.54431 -4.24572 1.94503 3.03022 3.11104 3.17660 3.20399 3.28033 3.98833 4.18085 4.33997 4.77798 4.89941 5.01213 5.06012 5.38739 5.43384 5.49992 5.55647 5.61973 5.82047 5.88883 5.93164 6.03882 6.07688 6.21940 6.44166 6.55225 6.61273 6.78794 6.98001 7.21131 7.38824 7.59124 8.21884 8.53342 8.90320 9.16947 9.60926 10.50249 Molecular weight = 271.11amu Principal moments of inertia in cm(-1) A = 0.013888 B = 0.008516 C = 0.005793 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2015.683465 B = 3287.310095 C = 4832.381375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.368 6.368 3 C 0.446 3.554 4 O -0.503 6.503 5 C 0.129 3.871 6 N -0.408 5.408 7 C -0.338 4.338 8 H 0.101 0.899 9 C 0.047 3.953 10 N -0.861 5.861 11 Si 0.920 3.080 12 H -0.271 1.271 13 H -0.281 1.281 14 H -0.267 1.267 15 C 0.508 3.492 16 O -0.580 6.580 17 C 0.086 3.914 18 F -0.119 7.119 19 C -0.182 4.182 20 C -0.073 4.073 21 C -0.140 4.140 22 C -0.090 4.090 23 H 0.056 0.944 24 H 0.093 0.907 25 H 0.056 0.944 26 H 0.102 0.898 27 H 0.139 0.861 28 H 0.275 0.725 29 H 0.084 0.916 30 H 0.088 0.912 31 H 0.071 0.929 32 H 0.082 0.918 33 H 0.091 0.909 34 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.838 2.056 -4.178 5.454 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.285 6.285 3 C 0.288 3.712 4 O -0.389 6.389 5 C 0.004 3.996 6 N -0.125 5.125 7 C -0.465 4.465 8 H 0.118 0.882 9 C -0.160 4.160 10 N -0.496 5.496 11 Si 0.746 3.254 12 H -0.196 1.196 13 H -0.206 1.206 14 H -0.192 1.192 15 C 0.297 3.703 16 O -0.465 6.465 17 C 0.064 3.936 18 F -0.098 7.098 19 C -0.186 4.186 20 C -0.111 4.111 21 C -0.177 4.177 22 C -0.127 4.127 23 H 0.075 0.925 24 H 0.111 0.889 25 H 0.075 0.925 26 H 0.120 0.880 27 H 0.157 0.843 28 H 0.085 0.915 29 H 0.103 0.897 30 H 0.106 0.894 31 H 0.090 0.910 32 H 0.100 0.900 33 H 0.109 0.891 34 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -3.091 1.936 -4.515 5.805 hybrid contribution -0.090 0.355 1.360 1.408 sum -3.181 2.291 -3.156 5.033 Atomic orbital electron populations 1.23097 0.78031 1.02640 1.02019 1.86546 1.22269 1.34754 1.84959 1.25228 0.93478 0.80913 0.71598 1.90583 1.66972 1.36420 1.44888 1.20982 0.84307 0.87499 1.06827 1.42890 1.55183 1.08780 1.05661 1.19697 1.32492 1.01818 0.92523 0.88164 1.25532 0.93308 0.96297 1.00882 1.69857 1.24664 1.20133 1.34987 0.86089 0.78560 0.79306 0.81468 1.19619 1.20640 1.19201 1.18255 0.82064 0.85956 0.83985 1.90653 1.54307 1.69293 1.32290 1.18539 1.01036 0.92862 0.81211 1.91502 1.84939 1.85020 1.48315 1.23081 1.02727 0.98067 0.94738 1.21783 0.98507 1.00300 0.90461 1.22702 1.00108 0.98814 0.96087 1.22000 1.01306 0.93630 0.95790 0.92483 0.88870 0.92476 0.88048 0.84329 0.91472 0.89719 0.89383 0.91020 0.89979 0.89060 0.91070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.54 10.56 101.05 1.07 1.61 16 2 O -0.37 -7.12 10.57 -39.26 -0.41 -7.53 16 3 C 0.45 10.21 7.99 36.01 0.29 10.50 16 4 O -0.50 -12.76 16.06 -18.75 -0.30 -13.06 16 5 C 0.13 3.07 5.43 -5.20 -0.03 3.04 16 6 N -0.41 -10.61 2.02 -117.43 -0.24 -10.85 16 7 C -0.34 -8.87 7.44 -15.02 -0.11 -8.98 16 8 H 0.10 2.67 6.53 -52.49 -0.34 2.32 16 9 C 0.05 1.18 4.95 -17.45 -0.09 1.09 16 10 N -0.86 -22.02 11.69 55.50 0.65 -21.38 16 11 Si 0.92 19.74 29.59 -169.99 -5.03 14.71 16 12 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 13 H -0.28 -5.88 7.11 56.52 0.40 -5.48 16 14 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 15 C 0.51 13.03 7.39 -12.65 -0.09 12.94 16 16 O -0.58 -15.19 14.86 5.23 0.08 -15.11 16 17 C 0.09 1.98 7.18 -37.71 -0.27 1.71 16 18 F -0.12 -2.82 14.00 2.25 0.03 -2.79 16 19 C -0.18 -3.54 6.89 -100.40 -0.69 -4.23 16 20 C -0.07 -1.22 7.05 -27.56 -0.19 -1.42 16 21 C -0.14 -1.85 8.17 -26.20 -0.21 -2.06 16 22 C -0.09 -1.33 7.95 -27.41 -0.22 -1.55 16 23 H 0.06 0.85 8.13 -51.93 -0.42 0.42 16 24 H 0.09 1.02 8.14 -51.93 -0.42 0.60 16 25 H 0.06 0.84 8.13 -51.93 -0.42 0.42 16 26 H 0.10 2.32 7.66 -51.93 -0.40 1.93 16 27 H 0.14 3.32 5.86 -51.93 -0.30 3.02 16 28 H 0.28 6.60 8.31 -40.82 -0.34 6.26 16 29 H 0.08 1.54 7.41 -51.93 -0.38 1.15 16 30 H 0.09 1.37 8.14 -51.93 -0.42 0.94 16 31 H 0.07 0.77 8.14 -51.93 -0.42 0.34 16 32 H 0.08 1.05 8.14 -51.93 -0.42 0.63 16 33 H 0.09 1.19 8.14 -51.93 -0.42 0.77 16 34 H 0.07 1.01 8.14 -51.93 -0.42 0.58 16 LS Contribution 301.99 15.07 4.55 4.55 Total: -1.00 -30.42 301.99 -5.17 -35.59 By element: Atomic # 1 Polarization: 7.14 SS G_CDS: -3.95 Total: 3.20 kcal Atomic # 6 Polarization: 13.21 SS G_CDS: -0.55 Total: 12.66 kcal Atomic # 7 Polarization: -32.64 SS G_CDS: 0.41 Total: -32.23 kcal Atomic # 8 Polarization: -35.06 SS G_CDS: -0.64 Total: -35.70 kcal Atomic # 9 Polarization: -2.82 SS G_CDS: 0.03 Total: -2.79 kcal Atomic # 14 Polarization: 19.74 SS G_CDS: -5.03 Total: 14.71 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -30.42 -5.17 -35.59 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000819299938.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.943 kcal (2) G-P(sol) polarization free energy of solvation -30.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds