Wall clock time and date at job start Mon Mar 30 2020 06:46:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35963 * 116.99640 * 2 1 4 4 C 1.38153 * 120.00638 * 0.28877 * 3 2 1 5 5 C 1.39772 * 119.88474 * 180.25607 * 4 3 2 6 6 C 1.47479 * 120.06202 * 179.77225 * 5 4 3 7 7 O 1.21513 * 119.99629 * 359.97438 * 6 5 4 8 8 O 1.34747 * 120.00441 * 179.97438 * 6 5 4 9 9 C 1.39814 * 119.88421 * 359.74600 * 5 4 3 10 10 C 1.37803 * 120.01210 * 359.97438 * 9 5 4 11 11 Cl 1.73597 * 119.94338 * 180.02562 * 10 9 5 12 12 C 1.39119 * 120.11576 * 359.97438 * 10 9 5 13 13 O 1.35627 * 119.94601 * 180.02562 * 12 10 9 14 14 C 1.34786 * 116.99763 * 89.99930 * 13 12 10 15 15 H 1.08002 * 120.00292 * 0.02562 * 14 13 12 16 16 C 1.38701 * 119.99840 * 179.72536 * 14 13 12 17 17 N 1.31524 * 120.00254 * 0.27805 * 16 14 13 18 18 Si 1.86803 * 119.99877 * 180.27938 * 16 14 13 19 19 H 1.48498 * 109.47174 * 90.00151 * 18 16 14 20 20 H 1.48501 * 109.47062 * 210.00102 * 18 16 14 21 21 H 1.48504 * 109.46913 * 329.99901 * 18 16 14 22 22 H 1.09001 * 109.47286 * 60.01075 * 1 2 3 23 23 H 1.09007 * 109.46574 * 180.02562 * 1 2 3 24 24 H 1.08994 * 109.47401 * 299.99990 * 1 2 3 25 25 H 1.07999 * 120.05501 * 0.02578 * 4 3 2 26 26 H 0.96705 * 117.00037 * 179.97438 * 8 6 5 27 27 H 1.08005 * 119.99481 * 180.02562 * 9 5 4 28 28 H 0.96996 * 120.00399 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 1.2938 2.3702 0.0060 5 6 1.9309 3.6142 0.0006 6 6 1.1315 4.8536 0.0019 7 8 -0.0821 4.7937 0.0073 8 8 1.7469 6.0523 -0.0028 9 6 3.3274 3.6817 -0.0055 10 6 4.0734 2.5231 -0.0057 11 17 5.8073 2.6090 -0.0127 12 6 3.4396 1.2847 0.0008 13 8 4.1773 0.1466 0.0011 14 6 4.5152 -0.3631 1.2022 15 1 4.1988 0.1330 2.1079 16 6 5.2640 -1.5284 1.2752 17 7 5.6490 -2.1329 0.1724 18 14 5.7257 -2.2391 2.9399 19 1 4.6701 -3.1843 3.3846 20 1 7.0199 -2.9589 2.8291 21 1 5.8541 -1.1392 3.9294 22 1 -0.3634 0.5137 -0.8901 23 1 -0.3633 -1.0278 0.0005 24 1 -0.3634 0.5138 0.8899 25 1 0.2152 2.3147 0.0112 26 1 1.1809 6.8364 -0.0021 27 1 3.8215 4.6421 -0.0093 28 1 6.1730 -2.9475 0.2235 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020377074.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:46:06 Heat of formation + Delta-G solvation = -127.540574 kcal Electronic energy + Delta-G solvation = -18470.396510 eV Core-core repulsion = 15093.197424 eV Total energy + Delta-G solvation = -3377.199087 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 272.033 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.48961 -39.53679 -37.53472 -36.38934 -36.08595 -35.60548 -32.03557 -29.95314 -29.81197 -27.15213 -25.25078 -23.67001 -22.06600 -21.11108 -18.54367 -18.17903 -17.64465 -16.48973 -16.16320 -15.94122 -15.66569 -15.27456 -14.58963 -14.39180 -13.90986 -13.62894 -13.43533 -12.78097 -12.31299 -12.06977 -11.64658 -11.50308 -11.40350 -11.31873 -11.07766 -10.75653 -10.52646 -10.42934 -10.37753 -10.18093 -9.76554 -8.30240 -8.26075 -7.77343 -6.09065 -3.79544 0.80001 1.48326 2.55971 2.61254 3.03273 3.26066 3.28829 3.32676 3.67766 3.81684 4.25030 4.90671 5.06610 5.17240 5.21812 5.27525 5.38982 5.40237 5.50448 5.70956 6.01206 6.23891 6.33684 6.41126 6.45361 6.70809 7.34910 7.69318 7.87064 8.25309 9.32359 9.91546 11.09635 Molecular weight = 272.03amu Principal moments of inertia in cm(-1) A = 0.020761 B = 0.006660 C = 0.005510 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1348.331135 B = 4202.966037 C = 5080.297467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.281 6.281 3 C 0.095 3.905 4 C -0.137 4.137 5 C -0.123 4.123 6 C 0.538 3.462 7 O -0.522 6.522 8 O -0.511 6.511 9 C -0.075 4.075 10 C -0.054 4.054 11 Cl -0.039 7.039 12 C 0.169 3.831 13 O -0.213 6.213 14 C -0.363 4.363 15 H 0.070 0.930 16 C 0.037 3.963 17 N -0.877 5.877 18 Si 0.930 3.070 19 H -0.278 1.278 20 H -0.281 1.281 21 H -0.272 1.272 22 H 0.052 0.948 23 H 0.100 0.900 24 H 0.052 0.948 25 H 0.143 0.857 26 H 0.411 0.589 27 H 0.145 0.855 28 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.346 11.309 0.288 13.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.193 6.193 3 C 0.048 3.952 4 C -0.156 4.156 5 C -0.125 4.125 6 C 0.383 3.617 7 O -0.413 6.413 8 O -0.322 6.322 9 C -0.094 4.094 10 C -0.082 4.082 11 Cl -0.010 7.010 12 C 0.120 3.880 13 O -0.125 6.125 14 C -0.439 4.439 15 H 0.088 0.912 16 C -0.163 4.163 17 N -0.517 5.517 18 Si 0.756 3.244 19 H -0.204 1.204 20 H -0.206 1.206 21 H -0.197 1.197 22 H 0.070 0.930 23 H 0.118 0.882 24 H 0.071 0.929 25 H 0.161 0.839 26 H 0.269 0.731 27 H 0.162 0.838 28 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -6.993 10.471 0.072 12.592 hybrid contribution -0.371 0.392 0.876 1.029 sum -7.365 10.863 0.948 13.158 Atomic orbital electron populations 1.23098 0.79441 1.03921 1.00842 1.86390 1.20063 1.24743 1.88139 1.19395 0.91761 0.84719 0.99339 1.21156 1.00605 0.90167 1.03708 1.18349 0.92292 0.89845 1.11981 1.20705 0.85796 0.83573 0.71605 1.90864 1.15274 1.87930 1.47190 1.84597 1.45126 1.16568 1.85925 1.21048 0.91948 0.97788 0.98661 1.21147 0.86597 0.93377 1.07060 1.98364 1.07470 1.98409 1.96712 1.18562 0.87434 0.88770 0.93214 1.83862 1.66452 1.32732 1.29416 1.20795 1.34139 1.08132 0.80815 0.91203 1.24963 0.97210 0.95868 0.98282 1.70007 1.36968 1.18529 1.26204 0.85893 0.78079 0.79178 0.81239 1.20422 1.20638 1.19685 0.92957 0.88176 0.92940 0.83915 0.73078 0.83773 0.92782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.31 9.81 101.05 0.99 1.30 15 2 O -0.28 -5.71 10.28 -34.25 -0.35 -6.06 15 3 C 0.09 1.91 6.70 -39.13 -0.26 1.65 15 4 C -0.14 -2.31 8.58 -39.04 -0.33 -2.65 15 5 C -0.12 -1.97 5.87 -104.97 -0.62 -2.58 15 6 C 0.54 7.58 8.26 34.50 0.29 7.86 15 7 O -0.52 -8.35 17.12 -19.28 -0.33 -8.68 15 8 O -0.51 -5.35 12.67 -40.62 -0.51 -5.87 15 9 C -0.08 -1.23 9.38 -39.15 -0.37 -1.59 15 10 C -0.05 -1.07 6.33 -39.41 -0.25 -1.32 15 11 Cl -0.04 -0.76 28.49 -51.86 -1.48 -2.24 15 12 C 0.17 3.86 5.60 -38.77 -0.22 3.64 15 13 O -0.21 -5.91 8.90 -14.07 -0.13 -6.04 15 14 C -0.36 -10.20 9.82 30.90 0.30 -9.90 15 15 H 0.07 1.89 7.76 -52.49 -0.41 1.49 15 16 C 0.04 1.05 5.49 -17.51 -0.10 0.95 15 17 N -0.88 -26.43 13.67 55.48 0.76 -25.67 15 18 Si 0.93 21.49 29.55 -169.99 -5.02 16.47 15 19 H -0.28 -6.29 7.11 56.52 0.40 -5.89 15 20 H -0.28 -6.38 7.11 56.52 0.40 -5.98 15 21 H -0.27 -6.07 7.11 56.52 0.40 -5.67 15 22 H 0.05 0.63 7.67 -51.93 -0.40 0.23 15 23 H 0.10 1.18 8.14 -51.92 -0.42 0.76 15 24 H 0.05 0.65 7.64 -51.93 -0.40 0.25 15 25 H 0.14 2.13 5.87 -52.49 -0.31 1.83 15 26 H 0.41 2.22 9.11 45.56 0.42 2.63 15 27 H 0.14 1.99 7.60 -52.48 -0.40 1.59 15 28 H 0.26 7.36 8.31 -40.82 -0.34 7.02 15 LS Contribution 279.94 15.07 4.22 4.22 Total: -1.00 -33.79 279.94 -4.46 -38.25 By element: Atomic # 1 Polarization: -0.70 SS G_CDS: -1.05 Total: -1.75 kcal Atomic # 6 Polarization: -2.07 SS G_CDS: -0.56 Total: -2.63 kcal Atomic # 7 Polarization: -26.43 SS G_CDS: 0.76 Total: -25.67 kcal Atomic # 8 Polarization: -25.32 SS G_CDS: -1.32 Total: -26.64 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -5.02 Total: 16.47 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.48 Total: -2.24 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -33.79 -4.46 -38.25 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020377074.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.293 kcal (2) G-P(sol) polarization free energy of solvation -33.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.248 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.541 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds