Wall clock time and date at job start Mon Mar 30 2020 06:46:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35954 * 117.00326 * 2 1 4 4 C 1.38481 * 120.00252 * 0.25355 * 3 2 1 5 5 C 1.38599 * 120.34202 * 180.25800 * 4 3 2 6 6 Cl 1.73601 * 119.81780 * 179.76523 * 5 4 3 7 7 C 1.37962 * 120.35934 * 359.73571 * 5 4 3 8 8 C 1.39745 * 120.00326 * 0.02562 * 7 5 4 9 9 C 1.47403 * 120.17164 * 180.02562 * 8 7 5 10 10 O 1.21517 * 120.00143 * 179.97438 * 9 8 7 11 11 O 1.34762 * 120.00423 * 359.97016 * 9 8 7 12 12 C 1.39302 * 120.00569 * 179.97438 * 3 2 1 13 13 O 1.35563 * 120.17482 * 0.02562 * 12 3 2 14 14 C 1.34777 * 116.99785 * 269.71761 * 13 12 3 15 15 H 1.08002 * 120.00500 * 0.02562 * 14 13 12 16 16 C 1.38687 * 119.99776 * 179.72535 * 14 13 12 17 17 N 1.31534 * 120.00117 * 0.27802 * 16 14 13 18 18 Si 1.86798 * 120.00288 * 180.27937 * 16 14 13 19 19 H 1.48500 * 109.47353 * 89.99701 * 18 16 14 20 20 H 1.48495 * 109.47568 * 210.00332 * 18 16 14 21 21 H 1.48504 * 109.46680 * 329.99949 * 18 16 14 22 22 H 1.08994 * 109.47110 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.47040 * 300.00796 * 1 2 3 24 24 H 1.09005 * 109.46953 * 59.99844 * 1 2 3 25 25 H 1.07990 * 119.82609 * 0.02562 * 4 3 2 26 26 H 1.07995 * 119.99697 * 180.02562 * 7 5 4 27 27 H 0.96687 * 117.00766 * 180.02562 * 11 9 8 28 28 H 0.96996 * 120.00405 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2113 0.0000 4 6 1.2922 2.3728 0.0053 5 6 1.9141 3.6114 0.0000 6 17 0.9555 5.0587 0.0005 7 6 3.2909 3.7003 -0.0052 8 6 4.0662 2.5377 -0.0056 9 6 5.5374 2.6284 -0.0106 10 8 6.2087 1.6155 -0.0105 11 8 6.1382 3.8347 -0.0153 12 6 3.4374 1.2843 0.0005 13 8 4.1792 0.1496 0.0005 14 6 4.5185 -0.3595 1.2014 15 1 4.1997 0.1348 2.1072 16 6 5.2719 -1.5217 1.2740 17 7 5.6599 -2.1240 0.1709 18 14 5.7356 -2.2317 2.9384 19 1 4.6836 -3.1813 3.3820 20 1 7.0327 -2.9462 2.8278 21 1 5.8592 -1.1319 3.9286 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 0.2139 2.3131 0.0099 26 1 3.7693 4.6685 -0.0090 27 1 7.1051 3.8437 -0.0189 28 1 6.1870 -2.9366 0.2217 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000132374371.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:46:08 Heat of formation + Delta-G solvation = -120.898272 kcal Electronic energy + Delta-G solvation = -18819.034300 eV Core-core repulsion = 15442.123246 eV Total energy + Delta-G solvation = -3376.911055 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 272.033 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -40.26551 -39.10374 -37.31757 -36.92655 -35.64323 -35.25402 -31.87343 -30.54323 -29.24315 -27.02957 -24.95850 -23.92005 -21.98275 -20.73456 -18.35293 -17.89242 -17.14548 -16.45339 -16.08004 -15.60112 -15.40126 -14.97207 -14.88853 -14.23103 -13.86399 -13.40500 -13.15400 -12.79216 -12.39797 -12.21031 -11.61267 -11.34928 -11.22356 -11.09983 -10.95687 -10.90573 -10.46719 -10.37763 -10.28399 -9.71471 -9.61788 -8.56154 -8.13273 -7.64366 -5.96789 -3.65470 0.98398 1.51438 2.20847 3.06689 3.28808 3.31519 3.33204 3.37481 3.82311 3.95498 4.34440 4.92326 5.08624 5.21311 5.24569 5.34443 5.36340 5.51527 5.65863 5.77802 6.04272 6.27811 6.34872 6.52742 6.83061 7.04364 7.40962 7.69220 8.35870 8.57533 9.44364 10.03966 11.22639 Molecular weight = 272.03amu Principal moments of inertia in cm(-1) A = 0.018464 B = 0.007436 C = 0.005804 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1516.126282 B = 3764.608249 C = 4823.293101 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.279 6.279 3 C 0.100 3.900 4 C -0.168 4.168 5 C -0.040 4.040 6 Cl -0.078 7.078 7 C -0.082 4.082 8 C -0.120 4.120 9 C 0.508 3.492 10 O -0.440 6.440 11 O -0.528 6.528 12 C 0.188 3.812 13 O -0.205 6.205 14 C -0.352 4.352 15 H 0.066 0.934 16 C 0.039 3.961 17 N -0.875 5.875 18 Si 0.929 3.071 19 H -0.279 1.279 20 H -0.282 1.282 21 H -0.274 1.274 22 H 0.100 0.900 23 H 0.052 0.948 24 H 0.051 0.949 25 H 0.139 0.861 26 H 0.144 0.856 27 H 0.407 0.593 28 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.373 11.257 0.231 14.031 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.191 6.191 3 C 0.053 3.947 4 C -0.188 4.188 5 C -0.067 4.067 6 Cl -0.049 7.049 7 C -0.101 4.101 8 C -0.123 4.123 9 C 0.348 3.652 10 O -0.323 6.323 11 O -0.341 6.341 12 C 0.139 3.861 13 O -0.117 6.117 14 C -0.428 4.428 15 H 0.083 0.917 16 C -0.161 4.161 17 N -0.515 5.515 18 Si 0.755 3.245 19 H -0.205 1.205 20 H -0.207 1.207 21 H -0.199 1.199 22 H 0.118 0.882 23 H 0.070 0.930 24 H 0.070 0.930 25 H 0.157 0.843 26 H 0.161 0.839 27 H 0.265 0.735 28 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -8.428 10.575 0.017 13.523 hybrid contribution 0.390 0.088 0.890 0.975 sum -8.038 10.663 0.907 13.384 Atomic orbital electron populations 1.23095 0.79544 1.03967 1.00690 1.86407 1.20015 1.24752 1.87974 1.19469 0.91852 0.84539 0.98855 1.21076 1.00424 0.90322 1.06991 1.20195 0.91175 0.86789 1.08554 1.98333 1.71998 1.37301 1.97276 1.21003 0.91090 0.98585 0.99437 1.19227 0.90169 0.92917 1.09941 1.20398 0.88635 0.80915 0.75244 1.91159 1.64868 1.35455 1.40806 1.84521 1.27823 1.34372 1.87373 1.18588 0.87396 0.88536 0.91577 1.83828 1.66068 1.32523 1.29235 1.20638 1.34065 1.07659 0.80466 0.91670 1.24901 0.97027 0.96169 0.98023 1.70012 1.36875 1.18551 1.26072 0.85924 0.78056 0.79047 0.81444 1.20522 1.20712 1.19950 0.88179 0.92973 0.93011 0.84346 0.83857 0.73529 0.93036 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.30 9.81 101.05 0.99 1.29 15 2 O -0.28 -5.61 10.28 -34.11 -0.35 -5.96 15 3 C 0.10 2.00 6.70 -39.10 -0.26 1.74 15 4 C -0.17 -2.68 8.81 -39.36 -0.35 -3.03 15 5 C -0.04 -0.62 6.31 -39.55 -0.25 -0.87 15 6 Cl -0.08 -0.99 28.94 -51.86 -1.50 -2.49 15 7 C -0.08 -1.35 9.38 -39.12 -0.37 -1.72 15 8 C -0.12 -2.46 5.89 -104.85 -0.62 -3.08 15 9 C 0.51 10.52 8.26 34.46 0.28 10.81 15 10 O -0.44 -11.29 15.16 -26.60 -0.40 -11.69 15 11 O -0.53 -8.04 12.68 -40.66 -0.52 -8.55 15 12 C 0.19 4.42 5.62 -38.44 -0.22 4.20 15 13 O -0.21 -5.97 7.97 -27.81 -0.22 -6.19 15 14 C -0.35 -10.39 8.79 30.90 0.27 -10.12 15 15 H 0.07 1.85 7.76 -52.49 -0.41 1.44 15 16 C 0.04 1.16 5.49 -17.51 -0.10 1.06 15 17 N -0.87 -27.60 13.67 55.48 0.76 -26.84 15 18 Si 0.93 22.43 29.55 -169.99 -5.02 17.40 15 19 H -0.28 -6.51 7.11 56.52 0.40 -6.10 15 20 H -0.28 -6.69 7.11 56.52 0.40 -6.29 15 21 H -0.27 -6.42 7.11 56.52 0.40 -6.02 15 22 H 0.10 1.13 8.14 -51.93 -0.42 0.71 15 23 H 0.05 0.59 7.64 -51.93 -0.40 0.19 15 24 H 0.05 0.57 7.67 -51.93 -0.40 0.18 15 25 H 0.14 1.77 6.27 -52.49 -0.33 1.44 15 26 H 0.14 2.05 7.61 -52.49 -0.40 1.65 15 27 H 0.41 4.32 9.11 45.56 0.42 4.74 15 28 H 0.26 7.62 8.31 -40.82 -0.34 7.28 15 LS Contribution 277.12 15.07 4.18 4.18 Total: -1.00 -35.89 277.12 -4.76 -40.65 By element: Atomic # 1 Polarization: 0.30 SS G_CDS: -1.07 Total: -0.78 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -0.61 Total: 0.28 kcal Atomic # 7 Polarization: -27.60 SS G_CDS: 0.76 Total: -26.84 kcal Atomic # 8 Polarization: -30.91 SS G_CDS: -1.49 Total: -32.40 kcal Atomic # 14 Polarization: 22.43 SS G_CDS: -5.02 Total: 17.40 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.50 Total: -2.49 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -35.89 -4.76 -40.65 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000132374371.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.246 kcal (2) G-P(sol) polarization free energy of solvation -35.893 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.652 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds