Wall clock time and date at job start Mon Mar 30 2020 06:52:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.36442 * 125.64282 * 2 1 4 4 C 1.34825 * 108.22915 * 179.97438 * 3 2 1 5 5 C 1.50696 * 126.28586 * 179.97438 * 4 3 2 6 6 H 1.08997 * 109.47396 * 359.97438 * 5 4 3 7 7 C 1.50707 * 109.47068 * 239.99959 * 5 4 3 8 8 H 1.08001 * 119.99896 * 270.86362 * 7 5 4 9 9 C 1.37874 * 119.99850 * 90.87416 * 7 5 4 10 10 N 1.31512 * 119.99846 * 187.20805 * 9 7 5 11 11 Si 1.86796 * 120.00198 * 7.19599 * 9 7 5 12 12 H 1.48500 * 109.47515 * 274.87582 * 11 9 7 13 13 H 1.48501 * 109.46980 * 154.87477 * 11 9 7 14 14 H 1.48499 * 109.47133 * 34.88088 * 11 9 7 15 15 C 1.53005 * 109.47350 * 120.00237 * 5 4 3 16 16 N 1.46895 * 109.47226 * 185.10760 * 15 5 4 17 17 C 1.40920 * 107.43067 * 0.26313 * 4 3 2 18 18 C 1.34946 * 107.41547 * 359.56789 * 17 4 3 19 19 Br 1.89101 * 125.89524 * 180.15728 * 18 17 4 20 20 H 1.08999 * 109.46965 * 90.00261 * 1 2 3 21 21 H 1.09004 * 109.47002 * 209.99932 * 1 2 3 22 22 H 1.08999 * 109.47167 * 330.00191 * 1 2 3 23 23 H 1.07999 * 125.88483 * 359.97298 * 3 2 1 24 24 H 0.97001 * 120.00298 * 179.97438 * 10 9 7 25 25 H 1.09003 * 109.46858 * 305.10389 * 15 5 4 26 26 H 1.08998 * 109.47083 * 65.10080 * 15 5 4 27 27 H 1.00901 * 111.00200 * 65.45879 * 16 15 5 28 28 H 1.00897 * 110.99721 * 189.41522 * 16 15 5 29 29 H 1.07994 * 126.29160 * 179.72044 * 17 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2601 1.1088 0.0000 4 6 3.5466 0.7053 0.0006 5 6 4.7611 1.5975 0.0002 6 1 4.4456 2.6408 -0.0010 7 6 5.5868 1.3215 -1.2299 8 1 6.3528 0.5604 -1.2066 9 6 5.3646 2.0407 -2.3850 10 7 5.9830 1.7070 -3.4966 11 14 4.1848 3.4889 -2.3711 12 1 2.7984 3.0001 -2.5812 13 1 4.5471 4.4328 -3.4588 14 1 4.2712 4.1852 -1.0624 15 6 5.5989 1.3190 1.2499 16 7 6.7159 2.2709 1.3127 17 6 3.5470 -0.7039 -0.0052 18 6 2.2596 -1.1082 0.0006 19 35 1.6608 -2.9019 0.0009 20 1 -0.3633 0.0000 -1.0277 21 1 -0.3633 -0.8900 0.5138 22 1 -0.3633 0.8900 0.5138 23 1 1.9180 2.1332 -0.0004 24 1 5.8264 2.2127 -4.3094 25 1 4.9759 1.4308 2.1373 26 1 5.9898 0.3024 1.2061 27 1 6.3807 3.2136 1.4434 28 1 7.3685 2.0152 2.0385 29 1 4.4177 -1.3428 -0.0106 RHF calculation, no. of doubly occupied orbitals= 39 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260124641.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:52:07 Heat of formation + Delta-G solvation = 53.837951 kcal Electronic energy + Delta-G solvation = -13783.006714 eV Core-core repulsion = 11367.370951 eV Total energy + Delta-G solvation = -2415.635764 eV No. of doubly occupied orbitals = 39 Molecular weight (most abundant/longest-lived isotopes) = 272.022 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.61823 -35.40003 -32.46039 -32.00732 -31.29744 -29.18184 -27.07453 -25.41230 -23.91108 -20.90103 -19.35973 -18.64535 -16.82468 -16.34321 -15.06150 -14.82607 -14.21948 -13.52873 -13.44711 -13.13879 -12.56866 -12.45926 -12.22248 -12.16067 -11.51288 -11.30280 -10.92716 -10.60787 -10.54223 -10.13704 -9.93053 -9.55975 -8.95512 -8.37469 -7.84959 -7.69069 -7.33459 -5.87700 -3.80185 1.78686 2.57252 3.36782 3.42116 3.42849 3.46147 3.71926 4.57846 4.91763 5.26265 5.35603 5.48211 5.57530 5.60232 6.05412 6.23276 6.24070 6.41839 6.70537 6.82493 7.02724 7.26550 7.53789 7.70119 7.77349 7.93161 8.10150 8.26324 8.73722 9.19917 9.76068 11.26598 Molecular weight = 272.02amu Principal moments of inertia in cm(-1) A = 0.023933 B = 0.007043 C = 0.006641 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1169.668919 B = 3974.689344 C = 4215.040222 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.447 5.447 3 C -0.025 4.025 4 C -0.106 4.106 5 C 0.068 3.932 6 H 0.039 0.961 7 C -0.462 4.462 8 H 0.074 0.926 9 C 0.070 3.930 10 N -0.905 5.905 11 Si 0.871 3.129 12 H -0.279 1.279 13 H -0.294 1.294 14 H -0.267 1.267 15 C 0.089 3.911 16 N -0.832 5.832 17 C -0.120 4.120 18 C -0.012 4.012 19 Br -0.028 7.028 20 H 0.068 0.932 21 H 0.079 0.921 22 H 0.081 0.919 23 H 0.155 0.845 24 H 0.259 0.741 25 H -0.002 1.002 26 H 0.061 0.939 27 H 0.329 0.671 28 H 0.324 0.676 29 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.782 -5.479 9.940 16.359 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.127 5.127 3 C -0.154 4.154 4 C -0.114 4.114 5 C 0.048 3.952 6 H 0.057 0.943 7 C -0.500 4.500 8 H 0.092 0.908 9 C -0.130 4.130 10 N -0.545 5.545 11 Si 0.700 3.300 12 H -0.206 1.206 13 H -0.220 1.220 14 H -0.193 1.193 15 C -0.042 4.042 16 N -0.359 5.359 17 C -0.149 4.149 18 C -0.200 4.200 19 Br 0.055 6.945 20 H 0.087 0.913 21 H 0.097 0.903 22 H 0.099 0.901 23 H 0.173 0.827 24 H 0.069 0.931 25 H 0.016 0.984 26 H 0.080 0.920 27 H 0.141 0.859 28 H 0.135 0.865 29 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -12.216 -6.338 8.989 16.438 hybrid contribution -1.065 1.381 0.611 1.847 sum -13.281 -4.957 9.600 17.121 Atomic orbital electron populations 1.21944 0.78161 1.03789 1.02950 1.43673 1.05349 1.04803 1.58885 1.21689 0.90332 0.90275 1.13123 1.20408 0.94264 0.94047 1.02700 1.17827 0.88974 0.93398 0.94997 0.94251 1.20687 1.16685 1.19950 0.92650 0.90806 1.24960 0.95446 0.97142 0.95451 1.69907 1.44170 1.40432 0.99963 0.86928 0.81893 0.83927 0.77270 1.20553 1.22032 1.19269 1.21678 0.91007 0.95840 0.95646 1.58425 1.18585 1.05092 1.53845 1.20669 0.93171 0.95456 1.05564 1.21695 0.92129 0.84358 1.21776 1.96550 1.90137 1.09323 1.98449 0.91329 0.90256 0.90054 0.82743 0.93104 0.98417 0.92004 0.85937 0.86541 0.84262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.90 10.92 59.85 0.65 1.56 15 2 N -0.45 -7.71 3.15 -122.56 -0.39 -8.10 15 3 C -0.03 -0.49 11.33 -16.71 -0.19 -0.68 15 4 C -0.11 -2.30 4.75 -104.82 -0.50 -2.79 15 5 C 0.07 1.57 1.98 -92.92 -0.18 1.39 15 6 H 0.04 0.93 5.12 -51.93 -0.27 0.66 15 7 C -0.46 -12.90 8.44 -34.44 -0.29 -13.19 15 8 H 0.07 2.29 8.06 -52.49 -0.42 1.86 15 9 C 0.07 2.05 5.47 -17.82 -0.10 1.95 15 10 N -0.91 -28.35 13.96 55.43 0.77 -27.58 15 11 Si 0.87 21.88 27.33 -169.99 -4.65 17.23 15 12 H -0.28 -6.91 7.11 56.52 0.40 -6.51 15 13 H -0.29 -7.46 7.11 56.52 0.40 -7.06 15 14 H -0.27 -6.31 6.33 56.52 0.36 -5.95 15 15 C 0.09 1.78 6.02 -3.82 -0.02 1.76 15 16 N -0.83 -15.65 9.30 -10.37 -0.10 -15.74 15 17 C -0.12 -2.48 10.47 -39.74 -0.42 -2.89 15 18 C -0.01 -0.23 7.30 -16.71 -0.12 -0.35 15 19 Br -0.03 -0.41 33.33 -68.01 -2.27 -2.68 15 20 H 0.07 0.80 8.14 -51.93 -0.42 0.37 15 21 H 0.08 0.85 7.63 -51.93 -0.40 0.46 15 22 H 0.08 0.81 8.14 -51.93 -0.42 0.39 15 23 H 0.16 2.69 8.06 -52.49 -0.42 2.27 15 24 H 0.26 7.69 8.31 -40.82 -0.34 7.35 15 25 H 0.00 -0.04 8.14 -51.93 -0.42 -0.46 15 26 H 0.06 1.27 8.14 -51.93 -0.42 0.84 15 27 H 0.33 5.71 9.07 -39.29 -0.36 5.36 15 28 H 0.32 5.03 9.08 -39.29 -0.36 4.68 15 29 H 0.14 2.86 8.06 -52.49 -0.42 2.44 15 LS Contribution 270.23 15.07 4.07 4.07 Total: -1.00 -32.12 270.23 -7.23 -39.35 By element: Atomic # 1 Polarization: 10.20 SS G_CDS: -3.51 Total: 6.69 kcal Atomic # 6 Polarization: -12.08 SS G_CDS: -1.17 Total: -13.25 kcal Atomic # 7 Polarization: -51.71 SS G_CDS: 0.29 Total: -51.42 kcal Atomic # 14 Polarization: 21.88 SS G_CDS: -4.65 Total: 17.23 kcal Atomic # 35 Polarization: -0.41 SS G_CDS: -2.27 Total: -2.68 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -32.12 -7.23 -39.35 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260124641.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.184 kcal (2) G-P(sol) polarization free energy of solvation -32.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.346 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds