Wall clock time and date at job start Mon Mar 30 2020 06:43:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.38602 * 119.99694 * 2 1 4 4 N 1.32892 * 120.42529 * 0.02562 * 3 2 1 5 5 C 1.32698 * 121.12260 * 179.97438 * 4 3 2 6 6 N 1.38405 * 118.99814 * 179.97438 * 5 4 3 7 7 N 1.32052 * 122.00683 * 0.25839 * 5 4 3 8 8 C 1.34213 * 120.71752 * 359.47982 * 7 5 4 9 9 C 1.41470 * 120.59519 * 180.23377 * 8 7 5 10 10 H 1.08003 * 119.99485 * 180.27411 * 9 8 7 11 11 C 1.40072 * 119.99978 * 0.27390 * 9 8 7 12 12 N 1.30694 * 119.99951 * 359.97438 * 11 9 8 13 13 Si 1.86799 * 119.99841 * 180.02562 * 11 9 8 14 14 H 1.48499 * 109.47252 * 59.99524 * 13 11 9 15 15 H 1.48496 * 109.46899 * 179.97438 * 13 11 9 16 16 H 1.48503 * 109.47144 * 299.99954 * 13 11 9 17 17 C 1.39655 * 120.42471 * 179.97438 * 3 2 1 18 18 Br 1.89100 * 120.90468 * 0.05316 * 17 3 2 19 19 H 1.09000 * 109.47051 * 299.99310 * 1 2 3 20 20 H 1.08995 * 109.47586 * 59.99485 * 1 2 3 21 21 H 1.09002 * 109.46789 * 179.97438 * 1 2 3 22 22 H 0.96992 * 119.99879 * 180.02562 * 2 1 3 23 23 H 0.97000 * 119.99304 * 0.02562 * 6 5 4 24 24 H 0.96995 * 120.00050 * 179.72709 * 6 5 4 25 25 H 0.96999 * 120.00115 * 180.02562 * 12 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1580 1.2004 0.0000 4 7 1.5020 2.3561 0.0005 5 6 2.1514 3.5133 0.0010 6 7 1.4241 4.6909 0.0010 7 7 3.4705 3.5757 -0.0040 8 6 4.2098 2.4556 0.0006 9 6 5.6228 2.5255 0.0002 10 1 6.2082 1.6179 -0.0006 11 6 6.2623 3.7716 0.0007 12 7 5.5538 4.8698 0.0011 13 14 8.1281 3.8638 -0.0006 14 1 8.6562 3.1900 -1.2139 15 1 8.5533 5.2866 -0.0004 16 1 8.6579 3.1881 1.2110 17 6 3.5545 1.2108 0.0005 18 35 4.5378 -0.4044 -0.0002 19 1 -0.3633 0.5137 0.8900 20 1 -0.3634 0.5139 -0.8899 21 1 -0.3633 -1.0277 -0.0005 22 1 1.9500 -0.8400 -0.0004 23 1 0.4545 4.6619 0.0010 24 1 1.8839 5.5449 0.0054 25 1 5.9966 5.7328 0.0011 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261063842.mol2 25 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:43:01 Heat of formation + Delta-G solvation = 51.284636 kcal Electronic energy + Delta-G solvation = -13527.935477 eV Core-core repulsion = 11008.648650 eV Total energy + Delta-G solvation = -2519.286827 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 271.997 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -38.96094 -35.51381 -34.31858 -32.54085 -30.81747 -30.15145 -27.60808 -26.70411 -24.58666 -21.51355 -21.07597 -18.17416 -16.78950 -15.95572 -15.38411 -14.50301 -14.18488 -14.01000 -13.55623 -13.11776 -12.82645 -12.76303 -11.73083 -11.32396 -11.21442 -10.80922 -10.64865 -10.30336 -9.99268 -9.33349 -9.20196 -8.95458 -8.52181 -7.70207 -7.36348 -6.57675 -6.44791 -4.78666 2.80323 3.04327 3.06793 3.10318 3.29549 3.37151 3.90147 4.03706 4.69308 4.81361 5.62468 5.89206 6.06403 6.07441 6.23890 6.56437 6.93143 7.03508 7.18589 7.83246 8.07778 8.12370 8.31038 8.51849 8.67371 8.88408 9.22328 10.16330 10.34929 Molecular weight = 272.00amu Principal moments of inertia in cm(-1) A = 0.019807 B = 0.010908 C = 0.007061 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1413.329514 B = 2566.376344 C = 3964.561928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.113 3.887 2 N -0.735 5.735 3 C 0.489 3.511 4 N -0.690 5.690 5 C 0.586 3.414 6 N -0.840 5.840 7 N -0.572 5.572 8 C 0.336 3.664 9 C -0.408 4.408 10 H 0.098 0.902 11 C 0.071 3.929 12 N -0.702 5.702 13 Si 0.909 3.091 14 H -0.262 1.262 15 H -0.277 1.277 16 H -0.262 1.262 17 C -0.382 4.382 18 Br -0.100 7.100 19 H 0.047 0.953 20 H 0.047 0.953 21 H 0.056 0.944 22 H 0.404 0.596 23 H 0.395 0.605 24 H 0.405 0.595 25 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.142 -5.117 0.019 6.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.032 4.032 2 N -0.372 5.372 3 C 0.248 3.752 4 N -0.431 5.431 5 C 0.224 3.776 6 N -0.389 5.389 7 N -0.305 5.305 8 C 0.207 3.793 9 C -0.441 4.441 10 H 0.116 0.884 11 C -0.157 4.157 12 N -0.322 5.322 13 Si 0.733 3.267 14 H -0.186 1.186 15 H -0.202 1.202 16 H -0.186 1.186 17 C -0.474 4.474 18 Br -0.019 7.019 19 H 0.066 0.934 20 H 0.066 0.934 21 H 0.075 0.925 22 H 0.240 0.760 23 H 0.222 0.778 24 H 0.235 0.765 25 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -3.408 -4.636 0.009 5.754 hybrid contribution 0.888 -0.293 0.007 0.935 sum -2.520 -4.929 0.016 5.536 Atomic orbital electron populations 1.21206 0.80854 0.99853 1.01314 1.44190 1.05557 1.04970 1.82516 1.17375 0.86060 0.85628 0.86126 1.66985 1.40006 0.96373 1.39782 1.19218 0.87059 0.84583 0.86730 1.41444 1.07676 1.04638 1.85164 1.69080 1.01532 1.29308 1.30533 1.17957 0.93290 0.83513 0.84540 1.19827 0.89874 0.93904 1.40501 0.88376 1.26150 1.00801 0.95440 0.93267 1.70108 1.37102 0.98368 1.26666 0.86343 0.81973 0.78122 0.80265 1.18642 1.20194 1.18637 1.22076 0.91593 0.91552 1.42172 1.96128 1.75760 1.31104 1.98904 0.93424 0.93435 0.92521 0.76002 0.77761 0.76506 0.91440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.76 10.75 59.85 0.64 2.40 15 2 N -0.74 -14.10 5.81 -67.05 -0.39 -14.49 15 3 C 0.49 11.58 7.51 -154.79 -1.16 10.42 15 4 N -0.69 -16.64 9.69 -13.19 -0.13 -16.77 15 5 C 0.59 14.49 8.66 -323.11 -2.80 11.69 15 6 N -0.84 -16.44 9.07 29.72 0.27 -16.17 15 7 N -0.57 -15.63 8.05 -11.92 -0.10 -15.73 15 8 C 0.34 9.24 6.58 -84.68 -0.56 8.68 15 9 C -0.41 -10.82 8.84 -37.66 -0.33 -11.15 15 10 H 0.10 2.49 6.50 -52.48 -0.34 2.15 15 11 C 0.07 1.77 5.50 -17.35 -0.10 1.68 15 12 N -0.70 -17.99 11.52 55.55 0.64 -17.35 15 13 Si 0.91 18.33 29.56 -169.99 -5.02 13.30 15 14 H -0.26 -5.23 7.11 56.52 0.40 -4.83 15 15 H -0.28 -5.39 7.11 56.52 0.40 -4.99 15 16 H -0.26 -5.23 7.11 56.52 0.40 -4.83 15 17 C -0.38 -9.56 6.35 -38.13 -0.24 -9.81 15 18 Br -0.10 -2.10 30.62 -68.01 -2.08 -4.18 15 19 H 0.05 0.76 8.14 -51.93 -0.42 0.34 15 20 H 0.05 0.76 8.14 -51.93 -0.42 0.34 15 21 H 0.06 0.67 8.14 -51.93 -0.42 0.25 15 22 H 0.40 7.13 7.36 -40.82 -0.30 6.83 15 23 H 0.39 6.56 8.94 -40.82 -0.36 6.19 15 24 H 0.41 7.46 8.94 -40.82 -0.36 7.09 15 25 H 0.27 6.35 8.29 -40.82 -0.34 6.02 15 LS Contribution 244.28 15.07 3.68 3.68 Total: -1.00 -29.79 244.28 -9.45 -39.24 By element: Atomic # 1 Polarization: 16.32 SS G_CDS: -1.77 Total: 14.55 kcal Atomic # 6 Polarization: 18.46 SS G_CDS: -4.54 Total: 13.92 kcal Atomic # 7 Polarization: -80.81 SS G_CDS: 0.30 Total: -80.51 kcal Atomic # 14 Polarization: 18.33 SS G_CDS: -5.02 Total: 13.30 kcal Atomic # 35 Polarization: -2.10 SS G_CDS: -2.08 Total: -4.18 kcal Total LS contribution 3.68 Total: 3.68 kcal Total: -29.79 -9.45 -39.24 kcal The number of atoms in the molecule is 25 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261063842.mol2 25 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.525 kcal (2) G-P(sol) polarization free energy of solvation -29.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.733 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.240 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds