Wall clock time and date at job start Mon Mar 30 2020 06:36:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46499 * 109.47173 * 50.30453 * 3 2 1 5 5 C 1.36927 * 120.00103 * 95.99905 * 4 3 2 6 6 H 1.08003 * 120.00234 * 159.12795 * 5 4 3 7 7 C 1.38853 * 120.00162 * 339.12698 * 5 4 3 8 8 N 1.31540 * 119.99627 * 339.45301 * 7 5 4 9 9 Si 1.86794 * 120.00284 * 159.45185 * 7 5 4 10 10 H 1.48502 * 109.47176 * 0.02562 * 9 7 5 11 11 H 1.48497 * 109.47361 * 119.99884 * 9 7 5 12 12 H 1.48498 * 109.47521 * 239.99998 * 9 7 5 13 13 C 1.38529 * 119.99747 * 275.72191 * 4 3 2 14 14 C 1.39620 * 120.52372 * 185.27290 * 13 4 3 15 15 C 1.38326 * 118.34318 * 179.97438 * 14 13 4 16 16 Cl 1.73604 * 120.41135 * 179.97438 * 15 14 13 17 17 N 1.32661 * 119.18411 * 0.02562 * 15 14 13 18 18 C 1.31927 * 120.98640 * 359.97438 * 17 15 14 19 19 Cl 1.73596 * 119.08995 * 179.97438 * 18 17 15 20 20 N 1.31860 * 121.82140 * 359.73775 * 18 17 15 21 21 H 1.08997 * 109.47012 * 290.29958 * 3 2 1 22 22 H 1.08995 * 109.46838 * 170.30456 * 3 2 1 23 23 H 0.97003 * 119.99598 * 180.02562 * 8 7 5 24 24 H 1.08007 * 120.82256 * 359.96275 * 14 13 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 7 3.0968 -0.8813 -1.0628 5 6 3.4416 -0.3596 -2.2809 6 1 4.0997 -0.9097 -2.9373 7 6 2.9453 0.8767 -2.6724 8 7 1.8638 1.3617 -2.1020 9 14 3.8134 1.8510 -4.0089 10 1 4.9967 1.0912 -4.4861 11 1 2.8807 2.0766 -5.1421 12 1 4.2528 3.1597 -3.4614 13 6 3.2155 -2.2423 -0.8334 14 6 3.7820 -3.0773 -1.7984 15 6 3.8788 -4.4292 -1.5220 16 17 4.5735 -5.5162 -2.6838 17 7 3.4334 -4.8851 -0.3586 18 6 2.9030 -4.0694 0.5324 19 17 2.3352 -4.7190 2.0388 20 7 2.7965 -2.7737 0.3123 21 1 2.9715 -0.3557 0.9638 22 1 2.9709 1.0138 -0.1731 23 1 1.5169 2.2252 -2.3758 24 1 4.1357 -2.6775 -2.7374 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307299272.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:36:51 Heat of formation + Delta-G solvation = 79.367275 kcal Electronic energy + Delta-G solvation = -15918.933148 eV Core-core repulsion = 12920.167831 eV Total energy + Delta-G solvation = -2998.765317 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 271.993 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.20587 -37.45149 -36.52423 -36.12805 -34.87202 -33.09659 -31.81176 -30.50711 -27.76934 -25.36420 -23.46215 -22.10299 -18.62687 -17.95573 -16.79947 -16.56071 -15.53321 -14.75601 -14.72716 -14.41829 -14.29718 -13.66330 -12.95617 -12.65598 -12.19909 -12.06255 -11.58563 -11.45499 -11.33649 -11.22198 -11.02023 -10.83178 -10.71899 -10.55548 -10.38520 -10.02054 -9.46349 -8.95173 -8.69515 -7.82862 -6.99429 -4.41707 1.49808 1.72689 1.82162 2.36951 2.89240 2.94612 3.00932 3.36862 3.78267 4.00979 4.17979 4.42191 4.54585 5.13598 5.27702 5.43490 5.83750 6.01605 6.02551 6.21695 6.59157 6.90437 7.22513 7.44981 7.97572 8.48964 8.56045 8.72678 8.98891 10.02295 Molecular weight = 271.99amu Principal moments of inertia in cm(-1) A = 0.017181 B = 0.007546 C = 0.005463 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1629.334692 B = 3709.887515 C = 5123.853103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.467 5.467 2 C 0.252 3.748 3 C 0.235 3.765 4 N -0.382 5.382 5 C -0.324 4.324 6 H 0.116 0.884 7 C 0.041 3.959 8 N -0.844 5.844 9 Si 0.939 3.061 10 H -0.261 1.261 11 H -0.277 1.277 12 H -0.273 1.273 13 C 0.393 3.607 14 C -0.267 4.267 15 C 0.253 3.747 16 Cl -0.040 7.040 17 N -0.593 5.593 18 C 0.427 3.573 19 Cl -0.001 7.001 20 N -0.582 5.582 21 H 0.098 0.902 22 H 0.124 0.876 23 H 0.284 0.716 24 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.217 -3.267 1.202 7.125 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.147 5.147 2 C -0.067 4.067 3 C 0.108 3.892 4 N -0.071 5.071 5 C -0.452 4.452 6 H 0.134 0.866 7 C -0.169 4.169 8 N -0.477 5.477 9 Si 0.763 3.237 10 H -0.185 1.185 11 H -0.202 1.202 12 H -0.198 1.198 13 C 0.147 3.853 14 C -0.300 4.300 15 C 0.089 3.911 16 Cl -0.012 7.012 17 N -0.324 5.324 18 C 0.129 3.871 19 Cl 0.026 6.974 20 N -0.313 5.313 21 H 0.116 0.884 22 H 0.141 0.859 23 H 0.095 0.905 24 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 4.086 -3.210 1.951 5.551 hybrid contribution 0.889 0.646 -1.428 1.802 sum 4.975 -2.564 0.523 5.621 Atomic orbital electron populations 1.80882 1.13514 1.09893 1.10402 1.28897 0.95013 0.91670 0.91118 1.18699 0.82149 0.97248 0.91083 1.42579 1.52753 0.99856 1.11898 1.19910 1.27806 1.03163 0.94369 0.86632 1.25525 0.94434 0.97847 0.99098 1.69944 1.16492 1.19611 1.41629 0.85660 0.79448 0.79281 0.79317 1.18502 1.20241 1.19814 1.18108 0.93687 0.85425 0.88072 1.21539 1.12906 0.91593 1.03921 1.21067 0.93426 0.87763 0.88837 1.98366 1.81912 1.65675 1.55197 1.66880 1.22147 1.40045 1.03316 1.21814 0.91882 0.84963 0.88414 1.98374 1.86736 1.85232 1.27011 1.67156 1.27830 1.12679 1.23670 0.88410 0.85883 0.90545 0.83145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -11.31 18.54 42.16 0.78 -10.52 14 2 C 0.25 5.61 13.49 -20.76 -0.28 5.33 14 3 C 0.23 4.57 5.05 -6.83 -0.03 4.54 14 4 N -0.38 -8.04 2.68 -117.98 -0.32 -8.35 14 5 C -0.32 -6.85 9.13 -15.05 -0.14 -6.99 14 6 H 0.12 2.31 6.07 -52.48 -0.32 1.99 14 7 C 0.04 0.86 4.86 -17.45 -0.08 0.77 14 8 N -0.84 -18.96 9.54 55.49 0.53 -18.44 14 9 Si 0.94 16.49 29.60 -169.99 -5.03 11.46 14 10 H -0.26 -4.47 7.11 56.52 0.40 -4.07 14 11 H -0.28 -5.08 7.11 56.52 0.40 -4.68 14 12 H -0.27 -4.77 7.11 56.52 0.40 -4.37 14 13 C 0.39 8.25 7.30 -154.73 -1.13 7.12 14 14 C -0.27 -5.21 9.18 -39.03 -0.36 -5.57 14 15 C 0.25 4.79 7.33 -17.16 -0.13 4.67 14 16 Cl -0.04 -0.63 29.15 -51.86 -1.51 -2.14 14 17 N -0.59 -11.82 10.40 -8.83 -0.09 -11.92 14 18 C 0.43 8.51 8.18 -91.98 -0.75 7.75 14 19 Cl 0.00 -0.02 29.27 -51.86 -1.52 -1.54 14 20 N -0.58 -12.13 9.39 -10.86 -0.10 -12.24 14 21 H 0.10 1.68 7.67 -51.93 -0.40 1.28 14 22 H 0.12 2.30 6.65 -51.93 -0.35 1.96 14 23 H 0.28 6.12 8.31 -40.82 -0.34 5.78 14 24 H 0.15 2.74 6.19 -52.48 -0.33 2.41 14 LS Contribution 259.30 15.07 3.91 3.91 Total: -1.00 -25.07 259.30 -6.78 -31.84 By element: Atomic # 1 Polarization: 0.83 SS G_CDS: -0.52 Total: 0.30 kcal Atomic # 6 Polarization: 20.53 SS G_CDS: -2.90 Total: 17.62 kcal Atomic # 7 Polarization: -62.26 SS G_CDS: 0.80 Total: -61.46 kcal Atomic # 14 Polarization: 16.49 SS G_CDS: -5.03 Total: 11.46 kcal Atomic # 17 Polarization: -0.65 SS G_CDS: -3.03 Total: -3.68 kcal Total LS contribution 3.91 Total: 3.91 kcal Total: -25.07 -6.78 -31.84 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307299272.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.211 kcal (2) G-P(sol) polarization free energy of solvation -25.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.777 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.844 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.367 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds