Wall clock time and date at job start Mon Mar 30 2020 06:42:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17405 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 N 1.46495 * 109.46743 * 185.17720 * 3 2 1 5 5 C 1.37100 * 120.00534 * 83.10195 * 4 3 2 6 6 H 1.08000 * 119.99628 * 314.60901 * 5 4 3 7 7 C 1.38942 * 120.00383 * 134.60645 * 5 4 3 8 8 N 1.31406 * 120.00211 * 162.49836 * 7 5 4 9 9 Si 1.86804 * 119.99935 * 342.49794 * 7 5 4 10 10 H 1.48498 * 109.47309 * 96.06881 * 9 7 5 11 11 H 1.48504 * 109.46928 * 216.07328 * 9 7 5 12 12 H 1.48501 * 109.47170 * 336.06878 * 9 7 5 13 13 C 1.34785 * 120.00065 * 263.09946 * 4 3 2 14 14 O 1.21283 * 120.00109 * 184.67723 * 13 4 3 15 15 C 1.50700 * 119.99563 * 4.67569 * 13 4 3 16 16 H 1.08995 * 110.77231 * 172.44320 * 15 13 4 17 17 N 1.47132 * 110.71366 * 295.66529 * 15 13 4 18 18 N 1.37756 * 113.52257 * 118.10821 * 17 15 13 19 19 C 1.27975 * 121.16241 * 0.26418 * 18 17 15 20 20 Cl 1.73602 * 126.04062 * 179.97438 * 19 18 17 21 21 S 1.77192 * 107.91839 * 359.97438 * 19 18 17 22 22 H 4.40637 * 5.51324 * 180.02562 * 4 1 2 23 23 H 1.08989 * 109.46937 * 65.17773 * 3 2 1 24 24 H 1.08995 * 109.47274 * 305.17157 * 3 2 1 25 25 H 0.97004 * 120.00212 * 179.97438 * 8 7 5 26 26 H 0.96999 * 123.23993 * 298.36805 * 17 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1337 1.3764 0.1246 5 6 3.2275 1.9612 1.3611 6 1 2.4145 1.8673 2.0659 7 6 4.3683 2.6746 1.7076 8 7 4.3381 3.5107 2.7209 9 14 5.9453 2.4451 0.7328 10 1 6.0500 3.5097 -0.2971 11 1 7.1104 2.5273 1.6499 12 1 5.9292 1.1159 0.0709 13 6 3.4902 2.0674 -0.9763 14 8 3.9733 3.1746 -0.8675 15 6 3.2886 1.4642 -2.3426 16 1 3.5009 2.1950 -3.1229 17 7 4.1248 0.2654 -2.5107 18 7 3.3989 -0.8858 -2.7238 19 6 2.1202 -0.8637 -2.7684 20 17 1.0834 -2.2315 -3.0288 21 16 1.5948 0.8099 -2.5175 22 1 -1.0502 -0.0005 0.0001 23 1 3.0095 -0.4306 -0.9326 24 1 3.0097 -0.5911 0.8400 25 1 5.1347 4.0084 2.9630 26 1 5.0939 0.2833 -2.4713 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000725704370.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:42:11 Heat of formation + Delta-G solvation = 128.745219 kcal Electronic energy + Delta-G solvation = -17229.411181 eV Core-core repulsion = 14272.945191 eV Total energy + Delta-G solvation = -2956.465989 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 273.008 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -39.97244 -38.06009 -36.99543 -35.28244 -32.72343 -32.07154 -31.30388 -27.68544 -26.72870 -24.21142 -22.12180 -20.27826 -19.32227 -18.13658 -17.38384 -16.53571 -16.00798 -15.70929 -15.33970 -15.12896 -14.09199 -13.84358 -13.52051 -12.99594 -12.85492 -12.63520 -12.09449 -11.88181 -11.57819 -11.26008 -11.11066 -10.51024 -10.15608 -10.05091 -9.88478 -9.75051 -9.26720 -8.75879 -8.67274 -7.90866 -7.26180 -6.35890 -4.17233 0.62962 1.50817 1.54041 1.66884 2.75897 3.26328 3.27229 3.33538 3.49891 3.52311 3.83635 4.20544 4.39816 4.80639 4.90980 4.98674 5.10237 5.38470 5.73226 6.10929 6.50767 6.96726 7.64063 7.64413 7.76723 8.26821 8.53762 8.60420 9.20257 9.48559 10.68164 Molecular weight = 273.01amu Principal moments of inertia in cm(-1) A = 0.029566 B = 0.008319 C = 0.007466 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 946.808299 B = 3365.047186 C = 3749.574609 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.154 4.154 3 C 0.185 3.815 4 N -0.427 5.427 5 C -0.345 4.345 6 H 0.101 0.899 7 C 0.092 3.908 8 N -0.854 5.854 9 Si 0.916 3.084 10 H -0.255 1.255 11 H -0.304 1.304 12 H -0.281 1.281 13 C 0.438 3.562 14 O -0.528 6.528 15 C 0.125 3.875 16 H 0.133 0.867 17 N -0.596 5.596 18 N -0.220 5.220 19 C 0.110 3.890 20 Cl 0.054 6.946 21 S -0.081 6.081 22 H 0.210 0.790 23 H 0.084 0.916 24 H 0.094 0.906 25 H 0.276 0.724 26 H 0.448 0.552 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.207 -10.228 -11.066 15.645 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C -0.157 4.157 3 C 0.062 3.938 4 N -0.146 5.146 5 C -0.472 4.472 6 H 0.118 0.882 7 C -0.119 4.119 8 N -0.488 5.488 9 Si 0.747 3.253 10 H -0.181 1.181 11 H -0.233 1.233 12 H -0.207 1.207 13 C 0.222 3.778 14 O -0.409 6.409 15 C -0.097 4.097 16 H 0.150 0.850 17 N -0.348 5.348 18 N -0.037 5.037 19 C -0.217 4.217 20 Cl 0.081 6.919 21 S 0.146 5.854 22 H 0.227 0.773 23 H 0.101 0.899 24 H 0.112 0.888 25 H 0.086 0.914 26 H 0.298 0.702 Dipole moment (debyes) X Y Z Total from point charges -4.302 -9.586 -10.962 15.184 hybrid contribution 1.407 -0.205 -0.342 1.462 sum -2.895 -9.790 -11.304 15.232 Atomic orbital electron populations 1.24486 0.95421 0.99962 1.04108 1.23111 0.94484 1.00401 0.97681 1.19163 0.84985 0.86550 1.03111 1.43460 1.55933 1.09418 1.05827 1.18941 1.04102 1.33759 0.90356 0.88153 1.25378 0.99023 0.92879 0.94631 1.69726 1.30054 1.21228 1.27805 0.86224 0.80256 0.78928 0.79908 1.18109 1.23333 1.20659 1.20099 0.86448 0.86579 0.84625 1.90574 1.45928 1.19872 1.84558 1.25237 0.90273 0.92211 1.01934 0.84957 1.48515 1.07755 0.97221 1.81275 1.71447 1.07458 1.12965 1.11839 1.26907 0.90661 0.93969 1.10190 1.98419 1.60427 1.38320 1.94702 1.87531 1.09567 0.99810 1.88505 0.77312 0.89857 0.88821 0.91430 0.70248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 26. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -3.59 18.60 29.55 0.55 -3.04 15 2 C -0.15 -2.87 10.04 -37.12 -0.37 -3.25 15 3 C 0.19 3.71 5.31 -6.83 -0.04 3.67 15 4 N -0.43 -10.20 2.09 -117.94 -0.25 -10.45 15 5 C -0.35 -9.61 9.65 -14.93 -0.14 -9.76 15 6 H 0.10 2.97 8.06 -52.49 -0.42 2.55 15 7 C 0.09 2.63 4.90 -17.47 -0.09 2.54 15 8 N -0.85 -25.44 13.96 55.49 0.77 -24.67 15 9 Si 0.92 23.27 24.72 -169.99 -4.20 19.07 15 10 H -0.26 -6.76 6.38 56.52 0.36 -6.40 15 11 H -0.30 -7.58 7.11 56.52 0.40 -7.18 15 12 H -0.28 -6.65 7.11 56.52 0.40 -6.25 15 13 C 0.44 10.16 5.40 -10.98 -0.06 10.11 15 14 O -0.53 -14.18 12.49 5.55 0.07 -14.11 15 15 C 0.12 2.24 4.28 -4.85 -0.02 2.22 15 16 H 0.13 2.14 8.14 -51.93 -0.42 1.72 15 17 N -0.60 -9.48 6.21 -8.25 -0.05 -9.53 15 18 N -0.22 -3.38 10.47 32.72 0.34 -3.04 15 19 C 0.11 1.62 6.58 51.16 0.34 1.96 15 20 Cl 0.05 0.65 29.33 -51.86 -1.52 -0.87 15 21 S -0.08 -1.33 18.04 -107.50 -1.94 -3.27 15 22 H 0.21 2.60 7.80 -54.08 -0.42 2.18 15 23 H 0.08 1.53 2.18 -51.94 -0.11 1.42 15 24 H 0.09 1.84 8.09 -51.93 -0.42 1.42 15 25 H 0.28 7.68 8.31 -40.82 -0.34 7.34 15 26 H 0.45 6.40 8.96 -184.33 -1.65 4.75 15 LS Contribution 254.21 15.07 3.83 3.83 Total: -1.00 -31.63 254.21 -5.40 -37.03 By element: Atomic # 1 Polarization: 4.17 SS G_CDS: -2.63 Total: 1.54 kcal Atomic # 6 Polarization: 4.29 SS G_CDS: 0.17 Total: 4.45 kcal Atomic # 7 Polarization: -48.50 SS G_CDS: 0.82 Total: -47.68 kcal Atomic # 8 Polarization: -14.18 SS G_CDS: 0.07 Total: -14.11 kcal Atomic # 14 Polarization: 23.27 SS G_CDS: -4.20 Total: 19.07 kcal Atomic # 16 Polarization: -1.33 SS G_CDS: -1.94 Total: -3.27 kcal Atomic # 17 Polarization: 0.65 SS G_CDS: -1.52 Total: -0.87 kcal Total LS contribution 3.83 Total: 3.83 kcal Total: -31.63 -5.40 -37.03 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000725704370.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 165.779 kcal (2) G-P(sol) polarization free energy of solvation -31.629 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 134.150 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.034 kcal (6) G-S(sol) free energy of system = (1) + (5) 128.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds