Wall clock time and date at job start Mon Mar 30 2020 05:29:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37556 * 120.06969 * 2 1 4 4 C 1.38659 * 121.20781 * 180.02562 * 3 2 1 5 5 C 1.38087 * 121.30240 * 0.02562 * 4 3 2 6 6 C 1.50703 * 119.98555 * 179.97438 * 5 4 3 7 7 C 1.39575 * 120.02538 * 359.66502 * 5 4 3 8 8 C 1.46786 * 120.58080 * 180.32249 * 7 5 4 9 9 O 1.21384 * 120.00411 * 266.64182 * 8 7 5 10 10 Cl 1.73602 * 119.99699 * 86.64638 * 8 7 5 11 11 C 1.40786 * 120.07256 * 180.02562 * 2 1 3 12 12 C 1.40767 * 120.61372 * 359.97438 * 11 2 1 13 13 H 1.08001 * 119.99418 * 135.73661 * 12 11 2 14 14 C 1.40361 * 120.00042 * 315.73534 * 12 11 2 15 15 N 1.30582 * 119.99855 * 335.88778 * 14 12 11 16 16 Si 1.86797 * 119.99795 * 155.61505 * 14 12 11 17 17 H 1.48501 * 109.47172 * 180.27405 * 16 14 12 18 18 H 1.48502 * 109.47182 * 300.27516 * 16 14 12 19 19 H 1.48506 * 109.47214 * 60.27852 * 16 14 12 20 20 H 1.09003 * 109.46894 * 269.97926 * 1 2 3 21 21 H 1.09001 * 109.46913 * 29.97283 * 1 2 3 22 22 H 1.08997 * 109.47069 * 149.97390 * 1 2 3 23 23 H 1.07995 * 119.39316 * 0.02562 * 3 2 1 24 24 H 1.08009 * 119.34780 * 180.02562 * 4 3 2 25 25 H 1.08997 * 109.47059 * 90.00004 * 6 5 4 26 26 H 1.08997 * 109.46915 * 209.99827 * 6 5 4 27 27 H 1.08998 * 109.47217 * 330.00082 * 6 5 4 28 28 H 0.96996 * 119.99836 * 355.60008 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1962 1.1904 0.0000 4 6 3.5825 1.2180 -0.0005 5 6 4.3233 0.0526 -0.0016 6 6 5.8289 0.1172 -0.0027 7 6 3.6781 -1.1851 0.0049 8 6 4.4534 -2.4314 0.0109 9 8 4.7214 -2.9846 -1.0357 10 17 4.9871 -3.1143 1.5151 11 6 2.2125 -1.2184 -0.0005 12 6 1.5233 -2.4458 -0.0006 13 1 1.8428 -3.2444 -0.6537 14 6 0.4210 -2.6317 0.8483 15 7 0.3051 -1.9158 1.9342 16 14 -0.8840 -3.8979 0.4205 17 1 -1.9382 -3.8951 1.4664 18 1 -1.4891 -3.5608 -0.8931 19 1 -0.2623 -5.2446 0.3481 20 1 -0.3633 -0.0004 1.0277 21 1 -0.3633 0.8902 -0.5134 22 1 -0.3633 -0.8897 -0.5142 23 1 1.6475 2.1206 0.0004 24 1 4.0931 2.1698 -0.0001 25 1 6.1927 0.1323 1.0246 26 1 6.2296 -0.7562 -0.5172 27 1 6.1534 1.0221 -0.5164 28 1 1.0115 -1.3014 2.1877 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000039057377.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:29:30 Heat of formation + Delta-G solvation = -46.482818 kcal Electronic energy + Delta-G solvation = -14808.828553 eV Core-core repulsion = 12235.653351 eV Total energy + Delta-G solvation = -2573.175201 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -39.03548 -37.54555 -35.56397 -34.67712 -32.18795 -30.12377 -28.29481 -26.14285 -23.81133 -23.29753 -20.65144 -19.24940 -17.59862 -16.14301 -15.39700 -15.25483 -14.57658 -14.07408 -13.53508 -13.15477 -13.04705 -12.70047 -12.29146 -12.02313 -11.95051 -11.35358 -11.03092 -10.73038 -10.65097 -10.62520 -10.47842 -10.39453 -10.31262 -9.84133 -9.35663 -8.91338 -7.79633 -7.48101 -7.28424 -4.76147 1.97884 2.25653 2.56047 2.74040 3.11128 3.14840 3.30040 3.91990 4.38059 4.92258 5.52366 5.59007 5.65161 5.98505 6.02784 6.16086 6.26388 6.39631 6.44854 6.74154 6.81033 6.90492 7.21823 7.36259 7.42333 7.54162 7.58724 7.63664 7.88707 7.99905 8.42853 8.60126 9.91563 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.021812 B = 0.012231 C = 0.008862 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1283.364999 B = 2288.665684 C = 3158.748102 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.171 4.171 3 C -0.064 4.064 4 C -0.235 4.235 5 C -0.014 4.014 6 C -0.118 4.118 7 C -0.266 4.266 8 C 0.506 3.494 9 O -0.437 6.437 10 Cl -0.156 7.156 11 C 0.142 3.858 12 C -0.527 4.527 13 H 0.080 0.920 14 C 0.045 3.955 15 N -0.779 5.779 16 Si 1.059 2.941 17 H -0.271 1.271 18 H -0.272 1.272 19 H -0.275 1.275 20 H 0.067 0.933 21 H 0.034 0.966 22 H 0.064 0.936 23 H 0.097 0.903 24 H 0.100 0.900 25 H 0.068 0.932 26 H 0.052 0.948 27 H 0.064 0.936 28 H 0.298 0.702 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.208 2.188 -0.273 3.120 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.173 4.173 3 C -0.083 4.083 4 C -0.254 4.254 5 C -0.014 4.014 6 C -0.175 4.175 7 C -0.269 4.269 8 C 0.356 3.644 9 O -0.310 6.310 10 Cl -0.131 7.131 11 C 0.138 3.862 12 C -0.554 4.554 13 H 0.098 0.902 14 C -0.178 4.178 15 N -0.401 5.401 16 Si 0.882 3.118 17 H -0.195 1.195 18 H -0.197 1.197 19 H -0.200 1.200 20 H 0.085 0.915 21 H 0.053 0.947 22 H 0.083 0.917 23 H 0.115 0.885 24 H 0.118 0.882 25 H 0.086 0.914 26 H 0.071 0.929 27 H 0.083 0.917 28 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.942 1.220 -0.168 1.550 hybrid contribution 1.675 0.610 -0.335 1.814 sum 2.618 1.829 -0.503 3.233 Atomic orbital electron populations 1.20744 0.92195 1.00316 1.01608 1.19903 0.95192 0.92210 1.09952 1.20611 0.93809 0.96430 0.97406 1.20053 0.93543 0.95658 1.16137 1.19304 0.93827 0.91779 0.96505 1.20843 0.93012 1.01819 1.01790 1.20289 0.94106 0.88881 1.23600 1.24281 0.73607 0.83476 0.83065 1.90608 1.49540 1.60341 1.30463 1.98471 1.88105 1.85697 1.40797 1.18195 0.87273 0.93023 0.87694 1.20459 1.12944 0.99676 1.22333 0.90186 1.26898 0.98742 0.99922 0.92196 1.70351 1.35286 1.16245 1.18209 0.83712 0.75501 0.75229 0.77322 1.19534 1.19744 1.19989 0.91491 0.94681 0.91700 0.88452 0.88194 0.91360 0.92868 0.91680 0.88937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.97 8.25 36.01 0.30 -1.67 15 2 C -0.17 -3.95 5.19 -103.91 -0.54 -4.49 15 3 C -0.06 -1.34 9.62 -39.67 -0.38 -1.72 15 4 C -0.23 -4.74 9.64 -39.48 -0.38 -5.12 15 5 C -0.01 -0.29 5.92 -104.18 -0.62 -0.90 15 6 C -0.12 -2.03 9.62 36.01 0.35 -1.68 15 7 C -0.27 -6.27 5.83 -102.57 -0.60 -6.86 15 8 C 0.51 11.64 4.92 34.19 0.17 11.81 15 9 O -0.44 -10.67 17.92 5.47 0.10 -10.57 15 10 Cl -0.16 -3.20 29.18 -51.86 -1.51 -4.72 15 11 C 0.14 3.52 4.97 -104.61 -0.52 3.00 15 12 C -0.53 -13.31 7.64 -37.83 -0.29 -13.60 15 13 H 0.08 2.10 7.92 -52.49 -0.42 1.68 15 14 C 0.05 1.08 3.30 -17.28 -0.06 1.02 15 15 N -0.78 -19.10 11.28 55.57 0.63 -18.47 15 16 Si 1.06 20.84 29.84 -169.99 -5.07 15.76 15 17 H -0.27 -5.24 7.11 56.52 0.40 -4.83 15 18 H -0.27 -5.14 7.11 56.52 0.40 -4.73 15 19 H -0.27 -5.29 7.11 56.52 0.40 -4.89 15 20 H 0.07 1.47 6.59 -51.93 -0.34 1.12 15 21 H 0.03 0.65 8.08 -51.93 -0.42 0.23 15 22 H 0.06 1.44 6.16 -51.93 -0.32 1.12 15 23 H 0.10 1.77 8.06 -52.49 -0.42 1.35 15 24 H 0.10 1.74 8.06 -52.48 -0.42 1.32 15 25 H 0.07 1.07 8.14 -51.93 -0.42 0.65 15 26 H 0.05 0.94 7.11 -51.93 -0.37 0.57 15 27 H 0.06 0.96 8.08 -51.93 -0.42 0.54 15 28 H 0.30 7.58 7.21 -40.82 -0.29 7.28 15 LS Contribution 259.85 15.07 3.92 3.92 Total: -1.00 -25.73 259.85 -7.16 -32.89 By element: Atomic # 1 Polarization: 4.04 SS G_CDS: -2.64 Total: 1.40 kcal Atomic # 6 Polarization: -17.65 SS G_CDS: -2.57 Total: -20.21 kcal Atomic # 7 Polarization: -19.10 SS G_CDS: 0.63 Total: -18.47 kcal Atomic # 8 Polarization: -10.67 SS G_CDS: 0.10 Total: -10.57 kcal Atomic # 14 Polarization: 20.84 SS G_CDS: -5.07 Total: 15.76 kcal Atomic # 17 Polarization: -3.20 SS G_CDS: -1.51 Total: -4.72 kcal Total LS contribution 3.92 Total: 3.92 kcal Total: -25.73 -7.16 -32.89 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000039057377.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.589 kcal (2) G-P(sol) polarization free energy of solvation -25.734 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.323 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.893 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds