Wall clock time and date at job start Mon Mar 30 2020 05:37:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30995 * 1 3 3 C 1.50704 * 120.00160 * 2 1 4 4 O 1.42894 * 109.47127 * 134.99585 * 3 2 1 5 5 C 1.35695 * 116.99597 * 180.02562 * 4 3 2 6 6 C 1.39298 * 119.82443 * 0.29066 * 5 4 3 7 7 C 1.36443 * 120.19269 * 180.26109 * 6 5 4 8 8 C 1.40851 * 119.83484 * 359.45255 * 7 6 5 9 9 C 1.41208 * 120.17401 * 180.29999 * 8 7 6 10 10 H 1.07997 * 119.99722 * 334.62710 * 9 8 7 11 11 C 1.39887 * 119.99790 * 154.63048 * 9 8 7 12 12 N 1.30881 * 120.00104 * 342.94432 * 11 9 8 13 13 Si 1.86803 * 119.99773 * 162.95079 * 11 9 8 14 14 H 1.48493 * 109.47423 * 59.99614 * 13 11 9 15 15 H 1.48497 * 109.46890 * 179.97438 * 13 11 9 16 16 H 1.48496 * 109.47062 * 299.99452 * 13 11 9 17 17 C 1.40812 * 119.64953 * 0.27610 * 8 7 6 18 18 C 1.36526 * 119.80329 * 359.97438 * 17 8 7 19 19 Cl 1.73601 * 119.92015 * 180.02562 * 18 17 8 20 20 H 1.08001 * 120.00085 * 180.02562 * 1 2 3 21 21 H 1.07996 * 120.00013 * 0.02562 * 1 2 3 22 22 H 1.08005 * 120.00271 * 179.97438 * 2 1 3 23 23 H 1.09000 * 109.47031 * 14.99171 * 3 2 1 24 24 H 1.08994 * 109.46921 * 254.99687 * 3 2 1 25 25 H 1.07998 * 119.90066 * 359.97438 * 6 5 4 26 26 H 1.08000 * 120.07818 * 179.72148 * 7 6 5 27 27 H 0.96999 * 120.00257 * 180.02562 * 12 11 9 28 28 H 1.07998 * 120.09537 * 179.97438 * 17 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 8 3.1266 1.2413 0.9527 5 6 3.9077 2.3437 1.0787 6 6 3.6482 3.4694 0.3004 7 6 4.4321 4.5800 0.4172 8 6 5.4994 4.5909 1.3362 9 6 6.3114 5.7387 1.4674 10 1 6.4091 6.4282 0.6420 11 6 6.9891 5.9826 2.6666 12 7 6.6285 5.3606 3.7603 13 14 8.4086 7.1962 2.7071 14 1 7.9259 8.5367 2.2887 15 1 8.9533 7.2749 4.0863 16 1 9.4747 6.7419 1.7785 17 6 5.7522 3.4512 2.1237 18 6 4.9618 2.3460 1.9912 19 17 5.2703 0.9395 2.9611 20 1 -0.5400 -0.9353 0.0004 21 1 -0.5400 0.9353 -0.0004 22 1 1.8500 -0.9353 0.0004 23 1 1.3855 2.1161 0.2658 24 1 2.4755 1.4867 -0.9926 25 1 2.8269 3.4613 -0.4009 26 1 4.2320 5.4501 -0.1904 27 1 7.0982 5.5300 4.5919 28 1 6.5690 3.4516 2.8303 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000062721069.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:37:18 Heat of formation + Delta-G solvation = -12.362663 kcal Electronic energy + Delta-G solvation = -14061.891591 eV Core-core repulsion = 11490.195951 eV Total energy + Delta-G solvation = -2571.695640 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -38.95551 -36.73920 -35.30994 -33.97305 -33.19305 -29.61733 -29.19498 -26.43070 -24.70057 -21.44549 -20.80726 -19.65422 -17.52326 -17.11991 -15.70561 -15.36529 -14.99937 -14.29574 -13.94491 -13.31525 -12.93160 -12.76588 -12.39469 -12.12686 -11.73079 -11.26855 -11.10545 -10.90494 -10.79928 -10.66888 -10.33110 -10.03105 -9.70232 -9.67712 -9.33311 -9.10079 -7.63502 -7.13735 -6.81572 -4.38876 2.19796 2.59779 2.71669 3.04428 3.05767 3.12695 3.35296 3.88313 4.16618 4.46923 5.09933 5.20790 5.45050 5.60043 5.66949 5.85147 5.94333 6.29393 6.57342 6.68485 6.78462 6.88474 7.02407 7.19140 7.25485 7.56458 7.75457 7.99940 8.29258 8.44353 8.75240 8.78115 10.11879 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.039071 B = 0.006434 C = 0.005666 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 716.469177 B = 4350.813145 C = 4940.340605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.141 4.141 3 C 0.091 3.909 4 O -0.313 6.313 5 C -0.003 4.003 6 C -0.157 4.157 7 C -0.194 4.194 8 C 0.097 3.903 9 C -0.459 4.459 10 H 0.081 0.919 11 C 0.074 3.926 12 N -0.792 5.792 13 Si 0.911 3.089 14 H -0.265 1.265 15 H -0.278 1.278 16 H -0.263 1.263 17 C -0.130 4.130 18 C -0.019 4.019 19 Cl -0.109 7.109 20 H 0.102 0.898 21 H 0.097 0.903 22 H 0.115 0.885 23 H 0.057 0.943 24 H 0.061 0.939 25 H 0.104 0.896 26 H 0.102 0.898 27 H 0.284 0.716 28 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.765 -4.462 -3.961 7.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C -0.159 4.159 3 C 0.015 3.985 4 O -0.229 6.229 5 C -0.047 4.047 6 C -0.176 4.176 7 C -0.213 4.213 8 C 0.094 3.906 9 C -0.488 4.488 10 H 0.099 0.901 11 C -0.144 4.144 12 N -0.417 5.417 13 Si 0.735 3.265 14 H -0.190 1.190 15 H -0.203 1.203 16 H -0.188 1.188 17 C -0.150 4.150 18 C -0.046 4.046 19 Cl -0.081 7.081 20 H 0.120 0.880 21 H 0.115 0.885 22 H 0.133 0.867 23 H 0.075 0.925 24 H 0.079 0.921 25 H 0.122 0.878 26 H 0.120 0.880 27 H 0.095 0.905 28 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.670 -4.766 -3.507 7.538 hybrid contribution 0.480 0.623 0.049 0.787 sum -4.191 -4.143 -3.458 6.833 Atomic orbital electron populations 1.23771 0.95513 1.02018 1.01258 1.22789 0.95585 0.98344 0.99166 1.21539 0.88787 0.95403 0.92764 1.85937 1.42108 1.36414 1.58429 1.18193 0.96251 0.87825 1.02478 1.20382 1.01733 0.94002 1.01449 1.20666 0.97949 0.97448 1.05270 1.17465 0.90646 0.92131 0.90358 1.19432 1.23881 1.06598 0.98918 0.90103 1.25924 0.97106 0.96489 0.94890 1.69801 1.35346 1.36627 0.99942 0.86322 0.81223 0.80737 0.78222 1.18994 1.20268 1.18750 1.20952 1.00486 0.90001 1.03562 1.19797 0.98630 0.89215 0.96947 1.98254 1.95584 1.42957 1.71306 0.88000 0.88474 0.86676 0.92520 0.92079 0.87822 0.88031 0.90511 0.84555 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.11 14.31 29.02 0.42 -1.69 15 2 C -0.14 -1.89 9.89 -36.02 -0.36 -2.25 15 3 C 0.09 1.46 5.14 36.01 0.19 1.64 15 4 O -0.31 -6.49 9.56 -18.79 -0.18 -6.66 15 5 C 0.00 -0.07 6.71 -38.75 -0.26 -0.33 15 6 C -0.16 -3.42 8.96 -39.83 -0.36 -3.78 15 7 C -0.19 -4.55 9.74 -39.24 -0.38 -4.93 15 8 C 0.10 2.50 5.57 -106.81 -0.59 1.91 15 9 C -0.46 -11.73 9.04 -37.84 -0.34 -12.07 15 10 H 0.08 1.96 7.90 -52.49 -0.41 1.55 15 11 C 0.07 1.81 5.15 -17.34 -0.09 1.72 15 12 N -0.79 -20.09 10.96 55.54 0.61 -19.48 15 13 Si 0.91 18.19 29.59 -169.99 -5.03 13.16 15 14 H -0.27 -5.22 7.11 56.52 0.40 -4.82 15 15 H -0.28 -5.44 7.11 56.52 0.40 -5.03 15 16 H -0.26 -5.22 7.11 56.52 0.40 -4.82 15 17 C -0.13 -3.35 8.40 -39.23 -0.33 -3.68 15 18 C -0.02 -0.46 6.29 -39.76 -0.25 -0.71 15 19 Cl -0.11 -2.39 28.48 -51.86 -1.48 -3.86 15 20 H 0.10 0.93 8.06 -52.49 -0.42 0.51 15 21 H 0.10 1.01 7.90 -52.49 -0.41 0.60 15 22 H 0.12 1.49 8.06 -52.48 -0.42 1.06 15 23 H 0.06 0.88 7.35 -51.93 -0.38 0.50 15 24 H 0.06 0.93 7.66 -51.93 -0.40 0.53 15 25 H 0.10 1.93 6.27 -52.49 -0.33 1.60 15 26 H 0.10 2.19 8.06 -52.49 -0.42 1.77 15 27 H 0.28 6.59 8.30 -40.82 -0.34 6.25 15 28 H 0.14 3.64 6.19 -52.49 -0.32 3.31 15 LS Contribution 264.85 15.07 3.99 3.99 Total: -1.00 -26.91 264.85 -7.11 -34.02 By element: Atomic # 1 Polarization: 5.67 SS G_CDS: -2.67 Total: 3.00 kcal Atomic # 6 Polarization: -21.81 SS G_CDS: -2.36 Total: -24.17 kcal Atomic # 7 Polarization: -20.09 SS G_CDS: 0.61 Total: -19.48 kcal Atomic # 8 Polarization: -6.49 SS G_CDS: -0.18 Total: -6.66 kcal Atomic # 14 Polarization: 18.19 SS G_CDS: -5.03 Total: 13.16 kcal Atomic # 17 Polarization: -2.39 SS G_CDS: -1.48 Total: -3.86 kcal Total LS contribution 3.99 Total: 3.99 kcal Total: -26.91 -7.11 -34.02 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000062721069.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.656 kcal (2) G-P(sol) polarization free energy of solvation -26.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.019 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds