Wall clock time and date at job start Mon Mar 30 2020 05:29:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.37844 * 119.93204 * 2 1 4 4 C 1.39773 * 119.85675 * 179.70378 * 3 2 1 5 5 C 1.47764 * 120.13999 * 180.30445 * 4 3 2 6 6 O 1.21774 * 119.99895 * 186.33108 * 5 4 3 7 7 C 1.41800 * 119.99802 * 6.32312 * 5 4 3 8 8 H 1.08004 * 120.00199 * 7.08129 * 7 5 4 9 9 C 1.40351 * 119.99777 * 187.07109 * 7 5 4 10 10 N 1.30531 * 120.00215 * 353.98908 * 9 7 5 11 11 Si 1.86805 * 119.99867 * 173.98903 * 9 7 5 12 12 H 1.48497 * 109.46966 * 94.98852 * 11 9 7 13 13 H 1.48498 * 109.46831 * 214.98984 * 11 9 7 14 14 H 1.48502 * 109.46953 * 334.98763 * 11 9 7 15 15 C 1.39803 * 119.72048 * 0.55406 * 4 3 2 16 16 C 1.50703 * 120.07282 * 179.71895 * 15 4 3 17 17 C 1.37800 * 119.85613 * 359.45004 * 15 4 3 18 18 C 1.38584 * 119.93073 * 179.97438 * 2 1 3 19 19 Cl 1.73597 * 119.85680 * 0.03991 * 18 2 1 20 20 H 1.09008 * 109.46704 * 270.01995 * 1 2 3 21 21 H 1.08999 * 109.47426 * 30.01011 * 1 2 3 22 22 H 1.08999 * 109.47572 * 150.01860 * 1 2 3 23 23 H 1.08005 * 120.06818 * 359.96526 * 3 2 1 24 24 H 0.97000 * 119.99661 * 179.97438 * 10 9 7 25 25 H 1.08996 * 109.47370 * 276.61788 * 16 15 4 26 26 H 1.09001 * 109.46842 * 36.61833 * 16 15 4 27 27 H 1.09003 * 109.46963 * 156.61407 * 16 15 4 28 28 H 1.07998 * 119.93055 * 180.25015 * 17 15 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1948 1.1946 0.0000 4 6 3.5925 1.1928 0.0063 5 6 4.3361 2.4696 0.0131 6 8 5.5487 2.4686 -0.0978 7 6 3.6375 3.6962 0.1486 8 1 2.5785 3.6939 0.3610 9 6 4.3222 4.9131 0.0068 10 7 5.6200 4.9194 -0.1327 11 14 3.3762 6.5238 0.0176 12 1 3.3781 7.0897 1.3905 13 1 4.0216 7.4832 -0.9142 14 1 1.9768 6.2789 -0.4149 15 6 4.2840 -0.0222 0.0008 16 6 5.7910 -0.0334 0.0011 17 6 3.5847 -1.2096 0.0007 18 6 2.1984 -1.2010 0.0005 19 17 1.3249 -2.7012 0.0002 20 1 -0.3633 0.0004 1.0278 21 1 -0.3634 0.8899 -0.5140 22 1 -0.3634 -0.8901 -0.5135 23 1 1.6547 2.1299 -0.0006 24 1 6.0931 5.7604 -0.2311 25 1 6.1555 0.0870 -1.0191 26 1 6.1603 0.7858 0.6180 27 1 6.1472 -0.9813 0.4046 28 1 4.1177 -2.1489 0.0005 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084915535.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:29:33 Heat of formation + Delta-G solvation = -39.395923 kcal Electronic energy + Delta-G solvation = -14341.665071 eV Core-core repulsion = 11768.797181 eV Total energy + Delta-G solvation = -2572.867891 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -39.14325 -36.72366 -35.79882 -33.35026 -32.54298 -30.44391 -28.79825 -26.67379 -24.43189 -22.89935 -21.06188 -19.09074 -16.63365 -15.78051 -15.36963 -15.19584 -14.21391 -13.90906 -13.46131 -12.98543 -12.87152 -12.35760 -12.23167 -11.98951 -11.74804 -11.49821 -11.39090 -11.17529 -10.96896 -10.89175 -10.57828 -10.43691 -10.38571 -10.05434 -9.04245 -8.17801 -7.81019 -7.43354 -6.37342 -4.98741 1.56522 1.87349 2.49765 2.99283 3.08436 3.11823 3.85480 3.94451 4.49971 5.19466 5.23752 5.56258 5.64881 5.76672 5.86607 5.88569 5.98610 6.10137 6.23205 6.47999 6.51607 6.60541 6.75673 6.93694 7.04802 7.16618 7.34952 7.51400 7.95672 8.69902 8.73502 10.20734 10.42018 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.034225 B = 0.007174 C = 0.005960 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 817.921517 B = 3902.216768 C = 4697.195712 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.102 4.102 3 C -0.080 4.080 4 C -0.098 4.098 5 C 0.385 3.615 6 O -0.531 6.531 7 C -0.514 4.514 8 H 0.074 0.926 9 C 0.080 3.920 10 N -0.733 5.733 11 Si 0.906 3.094 12 H -0.269 1.269 13 H -0.275 1.275 14 H -0.260 1.260 15 C -0.051 4.051 16 C -0.109 4.109 17 C -0.125 4.125 18 C -0.040 4.040 19 Cl -0.093 7.093 20 H 0.068 0.932 21 H 0.067 0.933 22 H 0.066 0.934 23 H 0.138 0.862 24 H 0.275 0.725 25 H 0.067 0.933 26 H 0.104 0.896 27 H 0.040 0.960 28 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.211 -7.091 0.252 10.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.103 4.103 3 C -0.098 4.098 4 C -0.100 4.100 5 C 0.282 3.718 6 O -0.421 6.421 7 C -0.545 4.545 8 H 0.092 0.908 9 C -0.144 4.144 10 N -0.361 5.361 11 Si 0.730 3.270 12 H -0.194 1.194 13 H -0.200 1.200 14 H -0.184 1.184 15 C -0.052 4.052 16 C -0.165 4.165 17 C -0.144 4.144 18 C -0.066 4.066 19 Cl -0.064 7.064 20 H 0.086 0.914 21 H 0.086 0.914 22 H 0.085 0.915 23 H 0.155 0.845 24 H 0.086 0.914 25 H 0.086 0.914 26 H 0.122 0.878 27 H 0.059 0.941 28 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -6.535 -7.181 0.171 9.711 hybrid contribution -0.752 0.524 -0.018 0.917 sum -7.287 -6.657 0.153 9.872 Atomic orbital electron populations 1.20774 0.91046 1.02753 1.02231 1.19658 0.96164 0.91567 1.02893 1.21390 0.93914 0.96676 0.97852 1.21875 0.94042 0.97634 0.96436 1.18082 0.88364 0.85576 0.79817 1.90440 1.14990 1.87612 1.49044 1.20934 0.96896 0.91550 1.45139 0.90758 1.25991 0.94617 1.00975 0.92769 1.69944 1.08070 1.28098 1.29983 0.86358 0.80757 0.80970 0.78931 1.19435 1.20046 1.18398 1.20163 0.96950 0.91327 0.96731 1.20974 0.90181 1.01888 1.03476 1.20791 0.91521 0.98398 1.03685 1.20782 0.91964 0.85510 1.08391 1.98298 1.77084 1.33828 1.97192 0.91378 0.91408 0.91511 0.84468 0.91387 0.91445 0.87804 0.94147 0.85874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.53 9.61 36.00 0.35 -1.19 15 2 C -0.10 -1.78 5.88 -104.64 -0.62 -2.40 15 3 C -0.08 -1.60 9.06 -39.15 -0.35 -1.95 15 4 C -0.10 -2.26 5.88 -104.84 -0.62 -2.88 15 5 C 0.39 10.43 6.84 -34.33 -0.23 10.20 15 6 O -0.53 -15.71 11.92 5.12 0.06 -15.65 15 7 C -0.51 -13.58 8.80 -37.43 -0.33 -13.91 15 8 H 0.07 1.78 6.18 -52.48 -0.32 1.46 15 9 C 0.08 2.07 5.50 -17.31 -0.10 1.98 15 10 N -0.73 -20.25 11.76 55.57 0.65 -19.60 15 11 Si 0.91 18.63 29.57 -169.99 -5.03 13.60 15 12 H -0.27 -5.43 7.11 56.52 0.40 -5.03 15 13 H -0.28 -5.56 7.11 56.52 0.40 -5.15 15 14 H -0.26 -5.18 7.11 56.52 0.40 -4.78 15 15 C -0.05 -1.07 5.92 -104.20 -0.62 -1.68 15 16 C -0.11 -2.20 8.74 36.01 0.31 -1.89 15 17 C -0.13 -2.27 9.44 -39.60 -0.37 -2.64 15 18 C -0.04 -0.69 6.33 -39.31 -0.25 -0.94 15 19 Cl -0.09 -1.35 27.27 -51.86 -1.41 -2.76 15 20 H 0.07 0.86 8.14 -51.92 -0.42 0.44 15 21 H 0.07 0.86 8.08 -51.93 -0.42 0.44 15 22 H 0.07 0.86 6.89 -51.93 -0.36 0.50 15 23 H 0.14 2.62 6.31 -52.48 -0.33 2.29 15 24 H 0.28 6.82 8.29 -40.82 -0.34 6.48 15 25 H 0.07 1.37 8.14 -51.93 -0.42 0.95 15 26 H 0.10 2.41 5.85 -51.93 -0.30 2.11 15 27 H 0.04 0.67 8.04 -51.93 -0.42 0.26 15 28 H 0.12 1.94 8.05 -52.49 -0.42 1.52 15 LS Contribution 257.79 15.07 3.88 3.88 Total: -1.00 -29.13 257.79 -7.22 -36.35 By element: Atomic # 1 Polarization: 4.03 SS G_CDS: -2.56 Total: 1.47 kcal Atomic # 6 Polarization: -14.48 SS G_CDS: -2.82 Total: -17.30 kcal Atomic # 7 Polarization: -20.25 SS G_CDS: 0.65 Total: -19.60 kcal Atomic # 8 Polarization: -15.71 SS G_CDS: 0.06 Total: -15.65 kcal Atomic # 14 Polarization: 18.63 SS G_CDS: -5.03 Total: 13.60 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -1.41 Total: -2.76 kcal Total LS contribution 3.88 Total: 3.88 kcal Total: -29.13 -7.22 -36.35 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084915535.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.042 kcal (2) G-P(sol) polarization free energy of solvation -29.133 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.221 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.354 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds