Wall clock time and date at job start Mon Mar 30 2020 05:32:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.50708 * 109.47095 * 2 1 4 4 C 1.38506 * 119.83063 * 270.02112 * 3 2 1 5 5 C 1.37826 * 120.19316 * 179.72047 * 4 3 2 6 6 C 1.39785 * 119.85460 * 0.51009 * 5 4 3 7 7 C 1.47755 * 120.16105 * 179.76800 * 6 5 4 8 8 O 1.21783 * 119.99220 * 179.72366 * 7 6 5 9 9 C 1.41811 * 120.00339 * 359.72253 * 7 6 5 10 10 H 1.08002 * 120.00328 * 0.02562 * 9 7 6 11 11 C 1.40350 * 120.00010 * 179.72207 * 9 7 6 12 12 N 1.30534 * 119.99897 * 0.28002 * 11 9 7 13 13 Si 1.86794 * 119.99933 * 180.27822 * 11 9 7 14 14 H 1.48498 * 109.47176 * 90.00246 * 13 11 9 15 15 H 1.48501 * 109.46931 * 210.00118 * 13 11 9 16 16 H 1.48503 * 109.47412 * 329.99812 * 13 11 9 17 17 C 1.39876 * 119.66822 * 359.49384 * 6 5 4 18 18 Cl 1.73601 * 120.09632 * 180.27450 * 17 6 5 19 19 C 1.38088 * 119.80399 * 0.24965 * 17 6 5 20 20 H 1.09001 * 109.47365 * 180.02562 * 1 2 3 21 21 H 1.09002 * 109.47126 * 299.99782 * 1 2 3 22 22 H 1.08997 * 109.47474 * 60.00122 * 1 2 3 23 23 H 1.08993 * 109.47381 * 240.00213 * 2 1 3 24 24 H 1.09003 * 109.47468 * 119.99405 * 2 1 3 25 25 H 1.08007 * 119.90640 * 359.97438 * 4 3 2 26 26 H 1.08007 * 120.07474 * 180.28038 * 5 4 3 27 27 H 0.96996 * 120.00248 * 179.97438 * 12 11 9 28 28 H 1.07998 * 119.93046 * 179.97438 * 19 17 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0323 1.4209 0.0000 4 6 2.2615 2.0706 -1.2015 5 6 2.7155 3.3720 -1.2103 6 6 2.9550 4.0335 -0.0024 7 6 3.4465 5.4269 -0.0039 8 8 3.6494 6.0020 1.0503 9 6 3.6821 6.0944 -1.2327 10 1 3.5018 5.5845 -2.1675 11 6 4.1435 7.4199 -1.2340 12 7 4.3609 8.0364 -0.1041 13 14 4.4463 8.3018 -2.8526 14 1 3.2043 8.9958 -3.2781 15 1 5.5344 9.2971 -2.6779 16 1 4.8410 7.3137 -3.8885 17 6 2.7215 3.3717 1.2076 18 17 3.0085 4.1851 2.7142 19 6 2.2616 2.0697 1.2002 20 1 -0.3634 -1.0277 0.0005 21 1 -0.3633 0.5138 0.8900 22 1 -0.3634 0.5138 -0.8900 23 1 1.8933 -0.5138 -0.8899 24 1 1.8933 -0.5137 0.8900 25 1 2.0802 1.5574 -2.1344 26 1 2.8893 3.8783 -2.1483 27 1 4.6801 8.9524 -0.1050 28 1 2.0811 1.5566 2.1332 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084916907.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:32:17 Heat of formation + Delta-G solvation = -33.341272 kcal Electronic energy + Delta-G solvation = -14207.138484 eV Core-core repulsion = 11634.533143 eV Total energy + Delta-G solvation = -2572.605341 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -38.94865 -36.42888 -35.48747 -33.50294 -32.63879 -30.28051 -29.16471 -26.71323 -23.98408 -21.98156 -21.21521 -19.62255 -16.75134 -16.00170 -15.13927 -15.09682 -14.34240 -13.75665 -13.62435 -13.21526 -13.09598 -12.81260 -12.44820 -11.95174 -11.48834 -11.45016 -11.13036 -10.92159 -10.85194 -10.68970 -10.50009 -10.36881 -10.13268 -9.93170 -8.97700 -8.21958 -7.82926 -7.30508 -6.25969 -4.89212 1.65094 1.85516 3.04611 3.07947 3.12539 3.15477 3.92996 4.00176 4.57692 4.96885 5.09346 5.40958 5.44854 5.57075 5.68312 5.79069 5.81392 5.87572 5.99196 6.11928 6.24301 6.40137 6.55221 6.86637 6.94160 7.09804 7.24128 7.45497 8.01897 8.78744 8.81368 10.31787 10.53699 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.030020 B = 0.007672 C = 0.006241 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 932.489651 B = 3648.914513 C = 4485.162479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.078 4.078 3 C -0.089 4.089 4 C -0.132 4.132 5 C -0.082 4.082 6 C -0.101 4.101 7 C 0.381 3.619 8 O -0.514 6.514 9 C -0.516 4.516 10 H 0.073 0.927 11 C 0.080 3.920 12 N -0.733 5.733 13 Si 0.906 3.094 14 H -0.269 1.269 15 H -0.277 1.277 16 H -0.262 1.262 17 C -0.012 4.012 18 Cl -0.050 7.050 19 C -0.127 4.127 20 H 0.053 0.947 21 H 0.055 0.945 22 H 0.056 0.944 23 H 0.069 0.931 24 H 0.067 0.933 25 H 0.118 0.882 26 H 0.136 0.864 27 H 0.274 0.726 28 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.470 -11.135 -2.133 12.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.116 4.116 3 C -0.089 4.089 4 C -0.150 4.150 5 C -0.100 4.100 6 C -0.103 4.103 7 C 0.275 3.725 8 O -0.401 6.401 9 C -0.547 4.547 10 H 0.091 0.909 11 C -0.143 4.143 12 N -0.362 5.362 13 Si 0.730 3.270 14 H -0.194 1.194 15 H -0.202 1.202 16 H -0.186 1.186 17 C -0.039 4.039 18 Cl -0.021 7.021 19 C -0.146 4.146 20 H 0.072 0.928 21 H 0.074 0.926 22 H 0.075 0.925 23 H 0.088 0.912 24 H 0.086 0.914 25 H 0.136 0.864 26 H 0.154 0.846 27 H 0.085 0.915 28 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -4.300 -10.655 -1.340 11.567 hybrid contribution 0.128 0.400 -0.812 0.914 sum -4.172 -10.255 -2.152 11.278 Atomic orbital electron populations 1.21753 0.95042 1.01180 1.02382 1.20467 0.95927 0.92796 1.02398 1.19738 1.00532 0.95972 0.92702 1.20994 1.01669 0.95356 0.96986 1.21510 0.96715 0.93520 0.98299 1.21876 0.97374 1.00463 0.90603 1.18110 0.80597 0.83032 0.90804 1.90591 1.49698 1.66233 1.33617 1.20900 1.41403 0.97750 0.94677 0.90934 1.25968 0.93434 0.97657 0.97278 1.69955 1.28322 1.10923 1.26985 0.86386 0.78738 0.79538 0.82373 1.19440 1.20184 1.18556 1.21195 1.01506 0.92756 0.88419 1.98357 1.94292 1.79577 1.29835 1.20751 1.02538 0.93362 0.97927 0.92785 0.92563 0.92513 0.91246 0.91387 0.86426 0.84620 0.91508 0.86098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.55 9.89 37.15 0.37 -1.18 15 2 C -0.08 -0.92 6.06 -27.88 -0.17 -1.09 15 3 C -0.09 -1.40 5.14 -104.48 -0.54 -1.93 15 4 C -0.13 -2.16 9.68 -39.63 -0.38 -2.54 15 5 C -0.08 -1.62 9.44 -39.15 -0.37 -1.99 15 6 C -0.10 -2.39 5.89 -104.82 -0.62 -3.01 15 7 C 0.38 10.71 6.91 -34.33 -0.24 10.47 15 8 O -0.51 -15.93 12.52 5.11 0.06 -15.87 15 9 C -0.52 -14.03 8.86 -37.42 -0.33 -14.36 15 10 H 0.07 1.78 6.02 -52.49 -0.32 1.46 15 11 C 0.08 2.13 5.50 -17.31 -0.10 2.03 15 12 N -0.73 -20.96 11.73 55.57 0.65 -20.31 15 13 Si 0.91 19.14 29.56 -169.99 -5.03 14.12 15 14 H -0.27 -5.58 7.11 56.52 0.40 -5.18 15 15 H -0.28 -5.73 7.11 56.52 0.40 -5.33 15 16 H -0.26 -5.34 7.11 56.52 0.40 -4.94 15 17 C -0.01 -0.25 6.36 -39.02 -0.25 -0.50 15 18 Cl -0.05 -1.12 26.03 -51.86 -1.35 -2.47 15 19 C -0.13 -2.25 9.47 -39.60 -0.37 -2.62 15 20 H 0.05 0.46 8.14 -51.93 -0.42 0.04 15 21 H 0.06 0.62 8.14 -51.93 -0.42 0.20 15 22 H 0.06 0.61 8.14 -51.93 -0.42 0.19 15 23 H 0.07 0.72 8.08 -51.93 -0.42 0.30 15 24 H 0.07 0.73 8.08 -51.93 -0.42 0.31 15 25 H 0.12 1.55 8.06 -52.48 -0.42 1.13 15 26 H 0.14 2.56 6.21 -52.48 -0.33 2.24 15 27 H 0.27 7.04 8.29 -40.82 -0.34 6.70 15 28 H 0.12 1.86 8.06 -52.49 -0.42 1.44 15 LS Contribution 261.58 15.07 3.94 3.94 Total: -1.00 -31.29 261.58 -7.44 -38.73 By element: Atomic # 1 Polarization: 1.30 SS G_CDS: -2.73 Total: -1.43 kcal Atomic # 6 Polarization: -13.72 SS G_CDS: -3.00 Total: -16.71 kcal Atomic # 7 Polarization: -20.96 SS G_CDS: 0.65 Total: -20.31 kcal Atomic # 8 Polarization: -15.93 SS G_CDS: 0.06 Total: -15.87 kcal Atomic # 14 Polarization: 19.14 SS G_CDS: -5.03 Total: 14.12 kcal Atomic # 17 Polarization: -1.12 SS G_CDS: -1.35 Total: -2.47 kcal Total LS contribution 3.94 Total: 3.94 kcal Total: -31.29 -7.44 -38.73 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084916907.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.393 kcal (2) G-P(sol) polarization free energy of solvation -31.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds