Wall clock time and date at job start Mon Mar 30 2020 05:37:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.50705 * 109.46703 * 2 1 4 4 O 1.21254 * 120.00333 * 359.97438 * 3 2 1 5 5 C 1.47157 * 119.99962 * 179.97438 * 3 2 1 6 6 C 1.40234 * 120.03318 * 0.02562 * 5 3 2 7 7 C 1.38139 * 120.35359 * 179.97438 * 6 5 3 8 8 C 1.38005 * 120.42914 * 0.02562 * 7 6 5 9 9 Cl 1.73607 * 119.97162 * 179.97438 * 8 7 6 10 10 C 1.40947 * 120.06048 * 359.97438 * 8 7 6 11 11 C 1.41395 * 120.17597 * 180.02562 * 10 8 7 12 12 H 1.08003 * 120.00310 * 334.21102 * 11 10 8 13 13 C 1.39929 * 120.00345 * 154.48829 * 11 10 8 14 14 N 1.30841 * 119.99530 * 343.17150 * 13 11 10 15 15 Si 1.86795 * 120.00203 * 163.16905 * 13 11 10 16 16 H 1.48500 * 109.47505 * 359.97438 * 15 13 11 17 17 H 1.48499 * 109.47118 * 120.00470 * 15 13 11 18 18 H 1.48502 * 109.46942 * 239.99962 * 15 13 11 19 19 C 1.39295 * 120.03682 * 180.27694 * 5 3 2 20 20 H 1.09005 * 109.46789 * 179.97438 * 1 2 3 21 21 H 1.08992 * 109.47539 * 300.00151 * 1 2 3 22 22 H 1.09003 * 109.47197 * 60.00454 * 1 2 3 23 23 H 1.09000 * 109.47591 * 240.00199 * 2 1 3 24 24 H 1.08996 * 109.47527 * 119.99707 * 2 1 3 25 25 H 1.08005 * 119.82708 * 359.97438 * 6 5 3 26 26 H 1.08000 * 119.78877 * 179.97438 * 7 6 5 27 27 H 0.97006 * 119.99869 * 185.03155 * 14 13 11 28 28 H 1.08004 * 120.21354 * 0.02562 * 19 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0322 1.4209 0.0000 4 8 1.2443 2.3425 -0.0005 5 6 3.4790 1.6899 0.0006 6 6 4.3910 0.6246 0.0006 7 6 5.7505 0.8695 0.0006 8 6 6.2274 2.1645 0.0011 9 17 7.9384 2.4587 0.0018 10 6 5.3266 3.2486 0.0011 11 6 5.8126 4.5764 0.0011 12 1 6.7890 4.7942 0.4080 13 6 5.0261 5.6094 -0.5208 14 7 4.0086 5.3298 -1.2944 15 14 5.4286 7.3873 -0.1130 16 1 6.6179 7.4344 0.7751 17 1 5.7164 8.1297 -1.3664 18 1 4.2711 8.0111 0.5771 19 6 3.9441 3.0029 0.0064 20 1 -0.3633 -1.0277 -0.0005 21 1 -0.3634 0.5138 0.8899 22 1 -0.3634 0.5138 -0.8900 23 1 1.8934 -0.5138 -0.8900 24 1 1.8934 -0.5138 0.8900 25 1 4.0285 -0.3928 0.0006 26 1 6.4447 0.0422 0.0010 27 1 3.5078 6.0464 -1.7150 28 1 3.2458 3.8268 0.0109 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000166321999.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:37:09 Heat of formation + Delta-G solvation = -45.992824 kcal Electronic energy + Delta-G solvation = -14263.366733 eV Core-core repulsion = 11690.212779 eV Total energy + Delta-G solvation = -2573.153954 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -39.04591 -37.20373 -35.06314 -33.92115 -32.46528 -30.13868 -29.60533 -25.73070 -24.53428 -21.65522 -21.12272 -18.86290 -17.36526 -15.90223 -15.20454 -15.00816 -14.92977 -14.53033 -13.57846 -13.14391 -12.76636 -12.71404 -12.11433 -11.98647 -11.64079 -11.39900 -11.27387 -11.23498 -10.86765 -10.71204 -10.32121 -10.28331 -10.16694 -9.42661 -9.38132 -8.85378 -7.73236 -7.56292 -6.93752 -4.55465 1.75153 2.65005 2.99629 3.02526 3.08195 3.36899 3.56598 3.82642 4.45238 4.72656 5.30838 5.33482 5.44080 5.65448 5.94903 6.00951 6.17843 6.19022 6.32854 6.39291 6.76649 6.79183 7.04654 7.10367 7.38177 7.58959 7.66935 7.90508 8.29875 8.35040 8.57241 8.62487 9.99179 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.020310 B = 0.009533 C = 0.006626 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1378.303434 B = 2936.477585 C = 4225.034077 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.168 4.168 3 C 0.396 3.604 4 O -0.468 6.468 5 C -0.160 4.160 6 C -0.200 4.200 7 C -0.088 4.088 8 C -0.124 4.124 9 Cl -0.114 7.114 10 C 0.101 3.899 11 C -0.441 4.441 12 H 0.092 0.908 13 C 0.072 3.928 14 N -0.781 5.781 15 Si 0.914 3.086 16 H -0.257 1.257 17 H -0.272 1.272 18 H -0.269 1.269 19 C -0.080 4.080 20 H 0.054 0.946 21 H 0.057 0.943 22 H 0.057 0.943 23 H 0.093 0.907 24 H 0.093 0.907 25 H 0.105 0.895 26 H 0.104 0.896 27 H 0.287 0.713 28 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.145 -5.588 1.495 5.896 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.206 4.206 3 C 0.276 3.724 4 O -0.345 6.345 5 C -0.161 4.161 6 C -0.220 4.220 7 C -0.107 4.107 8 C -0.152 4.152 9 Cl -0.086 7.086 10 C 0.097 3.903 11 C -0.469 4.469 12 H 0.110 0.890 13 C -0.148 4.148 14 N -0.405 5.405 15 Si 0.738 3.262 16 H -0.181 1.181 17 H -0.197 1.197 18 H -0.194 1.194 19 C -0.099 4.099 20 H 0.073 0.927 21 H 0.076 0.924 22 H 0.076 0.924 23 H 0.111 0.889 24 H 0.111 0.889 25 H 0.123 0.877 26 H 0.122 0.878 27 H 0.098 0.902 28 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.640 -4.956 1.394 5.403 hybrid contribution 0.446 0.662 -0.021 0.799 sum -1.194 -4.294 1.373 4.663 Atomic orbital electron populations 1.21581 0.94577 1.00922 1.02819 1.21952 0.97255 0.97207 1.04145 1.22570 0.88991 0.90166 0.70703 1.90451 1.58718 1.47928 1.37368 1.20148 0.93045 0.95053 1.07878 1.20416 0.91955 0.96583 1.13031 1.20326 0.94963 0.94188 1.01186 1.20954 0.81994 0.94211 1.18067 1.98213 1.16031 1.96816 1.97536 1.17403 0.90462 0.92349 0.90064 1.19771 1.02873 0.90582 1.33699 0.88953 1.26038 0.93243 1.02425 0.93105 1.69758 1.14861 1.35945 1.19885 0.86138 0.79858 0.80651 0.79534 1.18064 1.19688 1.19445 1.21765 0.95386 0.94735 0.98048 0.92720 0.92420 0.92369 0.88866 0.88890 0.87660 0.87818 0.90190 0.84395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.91 9.20 37.16 0.34 -1.57 15 2 C -0.17 -2.48 5.02 -27.88 -0.14 -2.62 15 3 C 0.40 8.00 7.11 -30.69 -0.22 7.78 15 4 O -0.47 -10.79 15.96 5.58 0.09 -10.70 15 5 C -0.16 -3.58 5.86 -105.13 -0.62 -4.19 15 6 C -0.20 -4.02 9.47 -38.87 -0.37 -4.39 15 7 C -0.09 -1.84 9.78 -39.70 -0.39 -2.23 15 8 C -0.12 -2.91 6.38 -38.64 -0.25 -3.16 15 9 Cl -0.11 -2.42 27.57 -51.86 -1.43 -3.85 15 10 C 0.10 2.58 5.56 -106.85 -0.59 1.99 15 11 C -0.44 -11.28 8.51 -37.75 -0.32 -11.60 15 12 H 0.09 2.30 7.11 -52.48 -0.37 1.93 15 13 C 0.07 1.76 5.15 -17.34 -0.09 1.67 15 14 N -0.78 -19.88 10.98 55.55 0.61 -19.27 15 15 Si 0.91 18.38 29.59 -169.99 -5.03 13.35 15 16 H -0.26 -5.11 7.11 56.52 0.40 -4.71 15 17 H -0.27 -5.35 7.11 56.52 0.40 -4.95 15 18 H -0.27 -5.37 7.11 56.52 0.40 -4.96 15 19 C -0.08 -2.03 8.23 -38.37 -0.32 -2.35 15 20 H 0.05 0.58 8.14 -51.93 -0.42 0.16 15 21 H 0.06 0.81 8.10 -51.93 -0.42 0.39 15 22 H 0.06 0.83 8.10 -51.93 -0.42 0.41 15 23 H 0.09 1.24 8.08 -51.93 -0.42 0.82 15 24 H 0.09 1.20 8.08 -51.93 -0.42 0.78 15 25 H 0.11 1.74 7.02 -52.48 -0.37 1.37 15 26 H 0.10 1.90 8.06 -52.49 -0.42 1.47 15 27 H 0.29 6.67 8.30 -40.82 -0.34 6.33 15 28 H 0.14 3.78 5.79 -52.48 -0.30 3.47 15 LS Contribution 262.48 15.07 3.96 3.96 Total: -1.00 -27.21 262.48 -7.47 -34.68 By element: Atomic # 1 Polarization: 5.21 SS G_CDS: -2.71 Total: 2.50 kcal Atomic # 6 Polarization: -17.70 SS G_CDS: -2.96 Total: -20.66 kcal Atomic # 7 Polarization: -19.88 SS G_CDS: 0.61 Total: -19.27 kcal Atomic # 8 Polarization: -10.79 SS G_CDS: 0.09 Total: -10.70 kcal Atomic # 14 Polarization: 18.38 SS G_CDS: -5.03 Total: 13.35 kcal Atomic # 17 Polarization: -2.42 SS G_CDS: -1.43 Total: -3.85 kcal Total LS contribution 3.96 Total: 3.96 kcal Total: -27.21 -7.47 -34.68 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000166321999.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.316 kcal (2) G-P(sol) polarization free energy of solvation -27.209 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.468 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds