Wall clock time and date at job start Mon Mar 30 2020 05:38:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.08999 * 110.68186 * 2 1 4 4 C 1.54709 * 110.92003 * 236.63369 * 2 1 3 5 5 C 1.51705 * 101.89212 * 216.44712 * 4 2 1 6 6 C 1.37956 * 132.04406 * 195.73819 * 5 4 2 7 7 C 1.38992 * 120.52785 * 179.10304 * 6 5 4 8 8 Cl 1.73598 * 119.97229 * 179.97438 * 7 6 5 9 9 C 1.37618 * 120.06096 * 359.90403 * 7 6 5 10 10 C 1.40512 * 120.05821 * 0.11834 * 9 7 6 11 11 C 1.41152 * 120.14352 * 180.26710 * 10 9 7 12 12 H 1.08001 * 120.00130 * 204.72094 * 11 10 9 13 13 C 1.39934 * 119.99855 * 24.72000 * 11 10 9 14 14 N 1.30856 * 119.99864 * 17.89202 * 13 11 10 15 15 Si 1.86799 * 119.99773 * 197.89534 * 13 11 10 16 16 H 1.48494 * 109.47473 * 359.97438 * 15 13 11 17 17 H 1.48506 * 109.47046 * 119.99954 * 15 13 11 18 18 H 1.48500 * 109.47256 * 239.99557 * 15 13 11 19 19 C 1.38528 * 107.01435 * 15.24524 * 5 4 2 20 20 O 1.35851 * 111.39402 * 1.24573 * 19 5 4 21 21 H 1.09003 * 109.46685 * 300.70182 * 1 2 3 22 22 H 1.08996 * 109.47302 * 60.69913 * 1 2 3 23 23 H 1.08993 * 109.47198 * 180.70508 * 1 2 3 24 24 H 1.09004 * 110.94927 * 334.59354 * 4 2 1 25 25 H 1.08994 * 110.94735 * 98.30049 * 4 2 1 26 26 H 1.08009 * 119.73620 * 359.10838 * 6 5 4 27 27 H 1.07997 * 119.97057 * 180.13864 * 9 7 6 28 28 H 0.97008 * 119.99697 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9150 1.0197 0.0000 4 6 2.0825 -0.7948 -1.2069 5 6 3.3095 -1.4574 -0.6096 6 6 4.4028 -2.0689 -1.1875 7 6 5.4196 -2.5910 -0.3967 8 17 6.7886 -3.3580 -1.1391 9 6 5.3429 -2.4992 0.9742 10 6 4.2352 -1.8797 1.5772 11 6 4.1573 -1.7795 2.9830 12 1 3.1954 -1.6874 3.4654 13 6 5.3264 -1.7996 3.7517 14 7 6.4833 -1.5595 3.1894 15 14 5.2355 -2.1691 5.5805 16 1 3.8214 -2.4032 5.9686 17 1 6.0389 -3.3813 5.8811 18 1 5.7740 -1.0161 6.3459 19 6 3.1954 -1.3557 0.7672 20 8 2.0397 -0.7373 1.1243 21 1 -0.3633 0.5247 0.8837 22 1 -0.3634 0.5029 -0.8961 23 1 -0.3633 -1.0275 0.0126 24 1 1.3627 -1.5404 -1.5450 25 1 2.3589 -0.1249 -2.0210 26 1 4.4693 -2.1424 -2.2631 27 1 6.1348 -2.9034 1.5872 28 1 7.2939 -1.5737 3.7222 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000215405539.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:38:34 Heat of formation + Delta-G solvation = -32.186379 kcal Electronic energy + Delta-G solvation = -14547.867915 eV Core-core repulsion = 11975.312654 eV Total energy + Delta-G solvation = -2572.555261 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.90951 -36.62371 -35.23741 -33.70547 -32.12514 -30.02934 -29.10453 -25.74104 -25.24429 -21.24641 -20.62021 -20.57338 -17.18352 -16.46525 -15.87150 -15.21797 -14.60265 -14.30210 -13.19608 -13.00652 -12.70456 -12.40523 -12.34024 -11.94874 -11.81171 -11.53395 -11.28169 -11.14876 -10.87944 -10.60869 -10.58862 -10.23909 -10.09126 -9.54996 -9.44809 -9.16210 -7.61386 -7.01743 -6.78956 -4.38839 2.55752 2.63371 3.05763 3.08630 3.13054 3.26733 3.89638 4.27144 4.44823 5.13925 5.19886 5.37108 5.52622 5.69524 5.84821 5.99290 6.06910 6.24590 6.26568 6.43640 6.73465 6.93446 7.01242 7.15465 7.38943 7.54036 7.70640 7.96147 8.10924 8.48262 8.70283 8.78875 10.09084 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.016408 B = 0.011634 C = 0.006994 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1706.046011 B = 2406.235035 C = 4002.327140 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.075 3.925 3 H 0.071 0.929 4 C -0.097 4.097 5 C -0.144 4.144 6 C -0.192 4.192 7 C -0.019 4.019 8 Cl -0.119 7.119 9 C -0.141 4.141 10 C 0.117 3.883 11 C -0.446 4.446 12 H 0.085 0.915 13 C 0.073 3.927 14 N -0.788 5.788 15 Si 0.911 3.089 16 H -0.259 1.259 17 H -0.270 1.270 18 H -0.273 1.273 19 C -0.002 4.002 20 O -0.301 6.301 21 H 0.062 0.938 22 H 0.068 0.932 23 H 0.062 0.938 24 H 0.076 0.924 25 H 0.074 0.926 26 H 0.100 0.900 27 H 0.137 0.863 28 H 0.283 0.717 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.595 0.914 -3.954 6.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.018 3.982 3 H 0.089 0.911 4 C -0.135 4.135 5 C -0.145 4.145 6 C -0.212 4.212 7 C -0.046 4.046 8 Cl -0.091 7.091 9 C -0.162 4.162 10 C 0.114 3.886 11 C -0.475 4.475 12 H 0.104 0.896 13 C -0.145 4.145 14 N -0.413 5.413 15 Si 0.735 3.265 16 H -0.182 1.182 17 H -0.195 1.195 18 H -0.199 1.199 19 C -0.046 4.046 20 O -0.217 6.217 21 H 0.081 0.919 22 H 0.087 0.913 23 H 0.081 0.919 24 H 0.095 0.905 25 H 0.092 0.908 26 H 0.118 0.882 27 H 0.155 0.845 28 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -4.343 0.886 -3.744 5.802 hybrid contribution 0.301 -0.089 0.473 0.568 sum -4.042 0.796 -3.270 5.260 Atomic orbital electron populations 1.21819 0.93506 1.02790 1.02041 1.23118 0.94481 0.95427 0.85164 0.91091 1.21686 0.95461 0.98576 0.97737 1.20105 0.96128 1.04385 0.93878 1.19235 0.95000 1.09535 0.97471 1.20443 0.88849 1.02197 0.93089 1.98250 1.46023 1.81224 1.83567 1.20920 1.01111 1.03329 0.90803 1.16782 0.87712 0.91110 0.92988 1.19523 0.94143 1.43039 0.90831 0.89643 1.25947 0.94706 0.92201 1.01649 1.69825 0.99516 1.33224 1.38743 0.86201 0.79881 0.78900 0.81497 1.18223 1.19538 1.19875 1.19696 0.90130 1.02879 0.91908 1.86671 1.35820 1.63210 1.35950 0.91885 0.91317 0.91857 0.90542 0.90782 0.88151 0.84507 0.90559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.95 9.60 37.16 0.36 -1.59 15 2 C 0.07 1.33 4.25 -25.83 -0.11 1.22 15 3 H 0.07 1.20 8.14 -51.93 -0.42 0.78 15 4 C -0.10 -1.71 6.66 -26.49 -0.18 -1.89 15 5 C -0.14 -3.23 6.27 -104.12 -0.65 -3.88 15 6 C -0.19 -4.32 9.82 -39.41 -0.39 -4.71 15 7 C -0.02 -0.46 6.32 -39.53 -0.25 -0.71 15 8 Cl -0.12 -2.44 28.95 -51.86 -1.50 -3.94 15 9 C -0.14 -3.66 8.43 -38.95 -0.33 -3.98 15 10 C 0.12 3.15 5.59 -106.56 -0.60 2.55 15 11 C -0.45 -11.91 9.01 -37.84 -0.34 -12.25 15 12 H 0.09 2.26 7.91 -52.49 -0.41 1.85 15 13 C 0.07 1.82 5.13 -17.33 -0.09 1.74 15 14 N -0.79 -20.09 10.97 55.55 0.61 -19.49 15 15 Si 0.91 18.58 29.60 -169.99 -5.03 13.54 15 16 H -0.26 -5.26 7.11 56.52 0.40 -4.86 15 17 H -0.27 -5.39 7.11 56.52 0.40 -4.99 15 18 H -0.27 -5.47 7.11 56.52 0.40 -5.07 15 19 C 0.00 -0.04 6.81 -38.10 -0.26 -0.30 15 20 O -0.30 -6.96 10.75 -19.27 -0.21 -7.17 15 21 H 0.06 0.81 8.14 -51.93 -0.42 0.39 15 22 H 0.07 0.73 8.14 -51.93 -0.42 0.31 15 23 H 0.06 0.86 8.14 -51.93 -0.42 0.44 15 24 H 0.08 1.23 7.93 -51.93 -0.41 0.81 15 25 H 0.07 1.14 8.14 -51.93 -0.42 0.72 15 26 H 0.10 2.03 8.06 -52.48 -0.42 1.60 15 27 H 0.14 3.64 6.16 -52.49 -0.32 3.32 15 28 H 0.28 6.54 8.30 -40.82 -0.34 6.20 15 LS Contribution 258.53 15.07 3.90 3.90 Total: -1.00 -27.58 258.53 -7.89 -35.47 By element: Atomic # 1 Polarization: 4.32 SS G_CDS: -2.82 Total: 1.50 kcal Atomic # 6 Polarization: -20.97 SS G_CDS: -2.83 Total: -23.80 kcal Atomic # 7 Polarization: -20.09 SS G_CDS: 0.61 Total: -19.49 kcal Atomic # 8 Polarization: -6.96 SS G_CDS: -0.21 Total: -7.17 kcal Atomic # 14 Polarization: 18.58 SS G_CDS: -5.03 Total: 13.54 kcal Atomic # 17 Polarization: -2.44 SS G_CDS: -1.50 Total: -3.94 kcal Total LS contribution 3.90 Total: 3.90 kcal Total: -27.58 -7.89 -35.47 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000215405539.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.279 kcal (2) G-P(sol) polarization free energy of solvation -27.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.465 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds