Wall clock time and date at job start Mon Mar 30 2020 05:39:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.09001 * 110.67061 * 2 1 4 4 O 1.43772 * 110.75186 * 123.21971 * 2 1 3 5 5 C 1.36156 * 109.25610 * 146.17423 * 4 2 1 6 6 C 1.39281 * 129.86893 * 161.53750 * 5 4 2 7 7 C 1.37925 * 120.26225 * 179.41182 * 6 5 4 8 8 C 1.38389 * 120.33608 * 359.91224 * 7 6 5 9 9 Cl 1.73605 * 120.13093 * 179.87206 * 8 7 6 10 10 C 1.38450 * 119.73972 * 0.14764 * 8 7 6 11 11 C 1.37740 * 119.96444 * 0.04613 * 10 8 7 12 12 C 1.51651 * 132.15478 * 179.45288 * 11 10 8 13 13 H 1.09001 * 110.93620 * 313.87673 * 12 11 10 14 14 C 1.50700 * 110.94106 * 77.56256 * 12 11 10 15 15 H 1.08005 * 119.99557 * 107.11169 * 14 12 11 16 16 C 1.37871 * 120.00246 * 287.11820 * 14 12 11 17 17 N 1.31518 * 120.00033 * 359.97438 * 16 14 12 18 18 Si 1.86804 * 120.00170 * 179.97438 * 16 14 12 19 19 H 1.48497 * 109.46761 * 60.00022 * 18 16 14 20 20 H 1.48491 * 109.47181 * 179.97438 * 18 16 14 21 21 H 1.48502 * 109.46941 * 300.00056 * 18 16 14 22 22 H 1.09001 * 109.46723 * 305.62487 * 1 2 3 23 23 H 1.09001 * 109.47468 * 65.61982 * 1 2 3 24 24 H 1.08998 * 109.47564 * 185.62715 * 1 2 3 25 25 H 1.08003 * 119.86681 * 359.44091 * 6 5 4 26 26 H 1.08000 * 119.83401 * 179.88278 * 7 6 5 27 27 H 1.08002 * 120.01698 * 180.02562 * 10 8 7 28 28 H 0.97003 * 120.00115 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.9147 1.0198 0.0000 4 8 2.0394 -0.7366 1.1247 5 6 3.1970 -1.3579 0.7675 6 6 4.2117 -1.8821 1.5646 7 6 5.3072 -2.4884 0.9860 8 6 5.4074 -2.5831 -0.3910 9 17 6.7902 -3.3443 -1.1138 10 6 4.4034 -2.0633 -1.1901 11 6 3.3110 -1.4541 -0.6132 12 6 2.0819 -0.7940 -1.2077 13 1 2.3554 -0.1236 -2.0224 14 6 1.0878 -1.8266 -1.6731 15 1 0.1765 -1.9883 -1.1164 16 6 1.3418 -2.5650 -2.8094 17 7 2.4513 -2.3678 -3.4874 18 14 0.1099 -3.8455 -3.3859 19 1 -1.1914 -3.1883 -3.6685 20 1 0.6140 -4.4960 -4.6219 21 1 -0.0724 -4.8695 -2.3260 22 1 -0.3633 0.5986 0.8354 23 1 -0.3634 0.4242 -0.9360 24 1 -0.3634 -1.0227 0.1008 25 1 4.1403 -1.8140 2.6401 26 1 6.0909 -2.8908 1.6106 27 1 4.4769 -2.1351 -2.2652 28 1 2.6298 -2.8871 -4.2871 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260129091.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:28 Heat of formation + Delta-G solvation = -18.643947 kcal Electronic energy + Delta-G solvation = -14832.226447 eV Core-core repulsion = 12260.258430 eV Total energy + Delta-G solvation = -2571.968017 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -40.27358 -37.03485 -35.48314 -33.74236 -31.37737 -30.21419 -29.07081 -26.30067 -24.46374 -21.73867 -20.84391 -20.22160 -17.15814 -16.16297 -16.00905 -15.21284 -14.61155 -14.38858 -13.29478 -13.22979 -12.87313 -12.47059 -12.30034 -12.09449 -11.57954 -11.46883 -11.07540 -10.95939 -10.89382 -10.57982 -10.41143 -10.22436 -9.88003 -9.40464 -9.28174 -8.62731 -7.99756 -7.20369 -6.20170 -4.26266 1.98764 2.13805 2.81341 3.23804 3.29270 3.31473 4.07015 4.28034 4.48639 5.10845 5.52743 5.59812 5.72284 5.84291 5.86082 5.99238 6.23696 6.36330 6.39398 6.57067 6.82748 6.88125 6.89224 7.13404 7.22218 7.35170 7.57885 7.76220 7.98191 8.10071 8.75125 9.38871 10.87069 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.019788 B = 0.011475 C = 0.007929 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1414.688401 B = 2439.424999 C = 3530.280846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C 0.074 3.926 3 H 0.063 0.937 4 O -0.309 6.309 5 C 0.093 3.907 6 C -0.147 4.147 7 C -0.104 4.104 8 C -0.074 4.074 9 Cl -0.096 7.096 10 C -0.050 4.050 11 C -0.098 4.098 12 C 0.060 3.940 13 H 0.060 0.940 14 C -0.514 4.514 15 H 0.073 0.927 16 C 0.068 3.932 17 N -0.880 5.880 18 Si 0.896 3.104 19 H -0.275 1.275 20 H -0.285 1.285 21 H -0.276 1.276 22 H 0.040 0.960 23 H 0.075 0.925 24 H 0.074 0.926 25 H 0.121 0.879 26 H 0.125 0.875 27 H 0.151 0.849 28 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.926 1.848 5.124 6.183 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.018 3.982 3 H 0.081 0.919 4 O -0.224 6.224 5 C 0.047 3.953 6 C -0.166 4.166 7 C -0.123 4.123 8 C -0.100 4.100 9 Cl -0.067 7.067 10 C -0.068 4.068 11 C -0.099 4.099 12 C 0.041 3.959 13 H 0.078 0.922 14 C -0.550 4.550 15 H 0.091 0.909 16 C -0.135 4.135 17 N -0.517 5.517 18 Si 0.723 3.277 19 H -0.200 1.200 20 H -0.211 1.211 21 H -0.201 1.201 22 H 0.059 0.941 23 H 0.094 0.906 24 H 0.093 0.907 25 H 0.139 0.861 26 H 0.143 0.857 27 H 0.168 0.832 28 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 3.009 1.732 5.087 6.159 hybrid contribution -0.372 -0.951 -0.561 1.166 sum 2.637 0.781 4.526 5.296 Atomic orbital electron populations 1.21756 0.92957 1.03077 1.00952 1.23489 0.95602 0.93844 0.85261 0.91903 1.86712 1.34356 1.62584 1.38712 1.19731 0.87041 0.94850 0.93628 1.19873 0.92838 1.05044 0.98821 1.20385 0.98125 1.01226 0.92590 1.20722 0.91414 1.05063 0.92844 1.98294 1.43186 1.81097 1.84160 1.20585 0.90303 0.94371 1.01569 1.21483 0.95591 1.00022 0.92845 1.19120 0.89504 0.94600 0.92655 0.92241 1.21080 1.04195 1.20312 1.09461 0.90901 1.24994 0.95466 0.96911 0.96155 1.69855 1.24125 1.40390 1.17315 0.86579 0.81310 0.81612 0.78171 1.20006 1.21096 1.20135 0.94097 0.90614 0.90715 0.86096 0.85733 0.83150 0.92497 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.35 8.63 37.15 0.32 -2.03 15 2 C 0.07 1.50 4.15 -25.83 -0.11 1.39 15 3 H 0.06 1.16 8.14 -51.93 -0.42 0.74 15 4 O -0.31 -6.70 10.81 -20.24 -0.22 -6.92 15 5 C 0.09 2.03 7.04 -38.96 -0.27 1.76 15 6 C -0.15 -2.76 10.06 -39.31 -0.40 -3.16 15 7 C -0.10 -1.88 9.81 -39.64 -0.39 -2.27 15 8 C -0.07 -1.47 6.33 -39.45 -0.25 -1.72 15 9 Cl -0.10 -1.69 28.97 -51.86 -1.50 -3.19 15 10 C -0.05 -1.13 9.31 -39.69 -0.37 -1.50 15 11 C -0.10 -2.29 5.42 -104.10 -0.56 -2.86 15 12 C 0.06 1.42 2.79 -91.56 -0.26 1.16 15 13 H 0.06 1.49 8.12 -51.93 -0.42 1.07 15 14 C -0.51 -13.11 7.87 -34.44 -0.27 -13.38 15 15 H 0.07 1.82 5.31 -52.48 -0.28 1.54 15 16 C 0.07 1.78 5.40 -17.82 -0.10 1.69 15 17 N -0.88 -23.46 11.26 55.43 0.62 -22.84 15 18 Si 0.90 20.48 29.54 -169.99 -5.02 15.46 15 19 H -0.27 -6.13 7.11 56.52 0.40 -5.73 15 20 H -0.29 -6.52 7.11 56.52 0.40 -6.12 15 21 H -0.28 -6.39 7.11 56.52 0.40 -5.99 15 22 H 0.04 0.63 8.14 -51.93 -0.42 0.21 15 23 H 0.08 1.30 8.14 -51.93 -0.42 0.88 15 24 H 0.07 1.45 6.15 -51.93 -0.32 1.13 15 25 H 0.12 1.94 8.06 -52.48 -0.42 1.51 15 26 H 0.12 1.86 8.06 -52.49 -0.42 1.44 15 27 H 0.15 3.67 6.68 -52.49 -0.35 3.32 15 28 H 0.27 6.83 8.31 -40.82 -0.34 6.50 15 LS Contribution 253.82 15.07 3.82 3.82 Total: -1.00 -26.54 253.82 -7.56 -34.10 By element: Atomic # 1 Polarization: 3.11 SS G_CDS: -2.62 Total: 0.49 kcal Atomic # 6 Polarization: -18.27 SS G_CDS: -2.65 Total: -20.92 kcal Atomic # 7 Polarization: -23.46 SS G_CDS: 0.62 Total: -22.84 kcal Atomic # 8 Polarization: -6.70 SS G_CDS: -0.22 Total: -6.92 kcal Atomic # 14 Polarization: 20.48 SS G_CDS: -5.02 Total: 15.46 kcal Atomic # 17 Polarization: -1.69 SS G_CDS: -1.50 Total: -3.19 kcal Total LS contribution 3.82 Total: 3.82 kcal Total: -26.54 -7.56 -34.10 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260129091.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.459 kcal (2) G-P(sol) polarization free energy of solvation -26.539 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.080 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.103 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds