Wall clock time and date at job start Mon Mar 30 2020 05:39:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08997 * 110.66764 * 2 1 4 4 O 1.43772 * 110.74908 * 123.20922 * 2 1 3 5 5 C 1.36161 * 109.25564 * 90.83703 * 4 2 1 6 6 C 1.39285 * 129.86783 * 198.46551 * 5 4 2 7 7 C 1.37931 * 120.25575 * 180.60504 * 6 5 4 8 8 C 1.38385 * 120.33963 * 0.34660 * 7 6 5 9 9 Cl 1.73598 * 120.13070 * 179.56740 * 8 7 6 10 10 C 1.38449 * 119.73361 * 359.30265 * 8 7 6 11 11 C 1.37740 * 119.97221 * 0.51337 * 10 8 7 12 12 C 1.51652 * 132.15920 * 180.25220 * 11 10 8 13 13 H 1.09001 * 110.96527 * 46.11710 * 12 11 10 14 14 C 1.50695 * 110.94160 * 282.44299 * 12 11 10 15 15 H 1.08005 * 120.00296 * 247.46761 * 14 12 11 16 16 C 1.37876 * 120.00165 * 67.46049 * 14 12 11 17 17 N 1.31513 * 119.99844 * 0.02562 * 16 14 12 18 18 Si 1.86803 * 120.00404 * 180.02562 * 16 14 12 19 19 H 1.48500 * 109.47009 * 60.00039 * 18 16 14 20 20 H 1.48494 * 109.47371 * 180.02562 * 18 16 14 21 21 H 1.48511 * 109.46897 * 300.00666 * 18 16 14 22 22 H 1.09005 * 109.47137 * 298.24270 * 1 2 3 23 23 H 1.08997 * 109.47110 * 58.24694 * 1 2 3 24 24 H 1.08998 * 109.47376 * 178.24544 * 1 2 3 25 25 H 1.07997 * 119.87221 * 0.57929 * 6 5 4 26 26 H 1.08002 * 119.82606 * 180.02562 * 7 6 5 27 27 H 1.08008 * 120.01032 * 180.20907 * 10 8 7 28 28 H 0.97010 * 120.00083 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9147 1.0198 0.0000 4 8 2.0393 -0.7364 1.1249 5 6 2.2160 -2.0381 0.7667 6 6 2.3498 -3.1730 1.5630 7 6 2.5348 -4.4108 0.9834 8 6 2.5963 -4.5358 -0.3934 9 17 2.8406 -6.0949 -1.1168 10 6 2.4568 -3.4133 -1.1917 11 6 2.2683 -2.1772 -0.6141 12 6 2.0821 -0.7941 -1.2074 13 1 1.3599 -0.8139 -2.0237 14 6 3.3984 -0.2247 -1.6701 15 1 3.8255 0.6285 -1.1641 16 6 4.0577 -0.7932 -2.7392 17 7 3.5376 -1.8319 -3.3557 18 14 5.6898 -0.0879 -3.3123 19 1 6.6759 -0.1584 -2.2042 20 1 6.1888 -0.8724 -4.4702 21 1 5.5019 1.3282 -3.7183 22 1 -0.3634 0.4863 0.9054 23 1 -0.3633 0.5408 -0.8738 24 1 -0.3634 -1.0271 -0.0315 25 1 2.3089 -3.0833 2.6385 26 1 2.6373 -5.2863 1.6075 27 1 2.5008 -3.5062 -2.2669 28 1 4.0017 -2.2322 -4.1077 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260129097.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:35 Heat of formation + Delta-G solvation = -23.310109 kcal Electronic energy + Delta-G solvation = -14851.013307 eV Core-core repulsion = 12278.842950 eV Total energy + Delta-G solvation = -2572.170357 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.31075 -36.99717 -35.44330 -33.62739 -31.42630 -29.95781 -29.04321 -27.04723 -23.84226 -21.95315 -20.85270 -20.31355 -16.87964 -16.15681 -15.85639 -15.28886 -14.73103 -14.57990 -13.19482 -13.10182 -12.86153 -12.57057 -12.32985 -11.97262 -11.69166 -11.47646 -11.40195 -10.87981 -10.85848 -10.56957 -10.53100 -10.15997 -9.91642 -9.50315 -9.39450 -8.63733 -7.95740 -7.18991 -6.20615 -4.28390 2.02105 2.18006 2.84929 3.23986 3.29213 3.31632 4.11203 4.27864 4.52334 5.10603 5.53902 5.56705 5.67161 5.75562 5.78356 6.05111 6.18165 6.21669 6.31939 6.54237 6.61929 6.85668 6.94313 7.17366 7.23387 7.38022 7.63984 7.72863 7.99830 8.07197 8.72226 9.36846 10.85163 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.017929 B = 0.012129 C = 0.008198 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1561.358204 B = 2307.965449 C = 3414.533074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.072 3.928 3 H 0.106 0.894 4 O -0.307 6.307 5 C 0.093 3.907 6 C -0.149 4.149 7 C -0.105 4.105 8 C -0.076 4.076 9 Cl -0.097 7.097 10 C -0.046 4.046 11 C -0.095 4.095 12 C 0.063 3.937 13 H 0.057 0.943 14 C -0.514 4.514 15 H 0.064 0.936 16 C 0.069 3.931 17 N -0.879 5.879 18 Si 0.898 3.102 19 H -0.276 1.276 20 H -0.285 1.285 21 H -0.275 1.275 22 H 0.054 0.946 23 H 0.070 0.930 24 H 0.055 0.945 25 H 0.120 0.880 26 H 0.124 0.876 27 H 0.156 0.844 28 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.777 -2.517 4.843 6.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.223 4.223 2 C 0.016 3.984 3 H 0.124 0.876 4 O -0.221 6.221 5 C 0.047 3.953 6 C -0.168 4.168 7 C -0.124 4.124 8 C -0.102 4.102 9 Cl -0.068 7.068 10 C -0.065 4.065 11 C -0.096 4.096 12 C 0.044 3.956 13 H 0.075 0.925 14 C -0.551 4.551 15 H 0.082 0.918 16 C -0.135 4.135 17 N -0.516 5.516 18 Si 0.726 3.274 19 H -0.201 1.201 20 H -0.210 1.210 21 H -0.200 1.200 22 H 0.073 0.927 23 H 0.089 0.911 24 H 0.074 0.926 25 H 0.138 0.862 26 H 0.142 0.858 27 H 0.173 0.827 28 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -3.688 -2.652 4.821 6.624 hybrid contribution 1.064 0.089 -0.513 1.184 sum -2.625 -2.563 4.308 5.658 Atomic orbital electron populations 1.22213 0.96037 1.02272 1.01742 1.23628 0.92581 0.96829 0.85345 0.87624 1.86744 1.79997 1.16636 1.38710 1.19757 0.96776 0.85082 0.93657 1.19865 1.08920 0.89248 0.98778 1.20385 1.02609 0.96735 0.92623 1.20740 1.10627 0.86046 0.92817 1.98290 1.95800 1.28588 1.84157 1.20726 0.95127 0.88711 1.01912 1.21372 0.99068 0.96522 0.92664 1.19106 0.97798 0.86110 0.92540 0.92479 1.20929 1.04984 1.14715 1.14518 0.91786 1.24957 0.97917 0.94704 0.95884 1.69807 1.38864 1.21445 1.21459 0.86539 0.83469 0.79122 0.78297 1.20112 1.21022 1.20009 0.92708 0.91124 0.92565 0.86176 0.85826 0.82666 0.92406 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.74 9.51 37.16 0.35 -2.39 15 2 C 0.07 1.45 3.83 -25.84 -0.10 1.36 15 3 H 0.11 2.05 7.79 -51.93 -0.40 1.64 15 4 O -0.31 -6.65 10.82 -20.25 -0.22 -6.87 15 5 C 0.09 2.03 6.96 -38.96 -0.27 1.76 15 6 C -0.15 -2.84 10.06 -39.30 -0.40 -3.23 15 7 C -0.10 -1.91 9.81 -39.64 -0.39 -2.30 15 8 C -0.08 -1.52 6.33 -39.45 -0.25 -1.77 15 9 Cl -0.10 -1.72 28.97 -51.86 -1.50 -3.22 15 10 C -0.05 -1.05 9.03 -39.69 -0.36 -1.41 15 11 C -0.09 -2.22 5.33 -104.10 -0.56 -2.78 15 12 C 0.06 1.50 2.50 -91.56 -0.23 1.27 15 13 H 0.06 1.42 7.93 -51.93 -0.41 1.01 15 14 C -0.51 -13.44 8.53 -34.44 -0.29 -13.73 15 15 H 0.06 1.66 7.63 -52.48 -0.40 1.26 15 16 C 0.07 1.81 5.37 -17.82 -0.10 1.72 15 17 N -0.88 -23.44 10.58 55.43 0.59 -22.86 15 18 Si 0.90 20.64 29.54 -169.99 -5.02 15.62 15 19 H -0.28 -6.42 7.11 56.52 0.40 -6.02 15 20 H -0.28 -6.50 7.11 56.52 0.40 -6.10 15 21 H -0.27 -6.18 7.11 56.52 0.40 -5.78 15 22 H 0.05 0.80 8.14 -51.93 -0.42 0.38 15 23 H 0.07 1.06 8.14 -51.93 -0.42 0.64 15 24 H 0.06 0.96 8.13 -51.93 -0.42 0.54 15 25 H 0.12 1.95 8.06 -52.49 -0.42 1.53 15 26 H 0.12 1.87 8.06 -52.49 -0.42 1.45 15 27 H 0.16 3.81 6.36 -52.48 -0.33 3.47 15 28 H 0.27 6.85 8.31 -40.82 -0.34 6.51 15 LS Contribution 257.02 15.07 3.87 3.87 Total: -1.00 -26.79 257.02 -7.66 -34.45 By element: Atomic # 1 Polarization: 3.32 SS G_CDS: -2.80 Total: 0.52 kcal Atomic # 6 Polarization: -18.94 SS G_CDS: -2.58 Total: -21.52 kcal Atomic # 7 Polarization: -23.44 SS G_CDS: 0.59 Total: -22.86 kcal Atomic # 8 Polarization: -6.65 SS G_CDS: -0.22 Total: -6.87 kcal Atomic # 14 Polarization: 20.64 SS G_CDS: -5.02 Total: 15.62 kcal Atomic # 17 Polarization: -1.72 SS G_CDS: -1.50 Total: -3.22 kcal Total LS contribution 3.87 Total: 3.87 kcal Total: -26.79 -7.66 -34.45 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260129097.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.142 kcal (2) G-P(sol) polarization free energy of solvation -26.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.453 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds