Wall clock time and date at job start Mon Mar 30 2020 05:39:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09000 * 110.81207 * 2 1 4 4 O 1.43777 * 110.74748 * 236.68194 * 2 1 3 5 5 C 1.36134 * 109.23965 * 213.92830 * 4 2 1 6 6 C 1.39268 * 129.87604 * 198.36736 * 5 4 2 7 7 C 1.38042 * 120.23228 * 180.98423 * 6 5 4 8 8 Cl 1.73603 * 119.84046 * 180.02562 * 7 6 5 9 9 C 1.38411 * 120.32184 * 0.04317 * 7 6 5 10 10 C 1.38329 * 119.75254 * 359.81134 * 9 7 6 11 11 C 1.37747 * 119.99446 * 359.97438 * 10 9 7 12 12 C 1.51651 * 132.15376 * 180.36333 * 11 10 9 13 13 H 1.09002 * 110.94112 * 282.78762 * 12 11 10 14 14 C 1.50702 * 110.93841 * 46.43201 * 12 11 10 15 15 H 1.07996 * 119.99856 * 65.12804 * 14 12 11 16 16 C 1.37884 * 120.00079 * 245.12638 * 14 12 11 17 17 N 1.31513 * 119.99706 * 175.23429 * 16 14 12 18 18 Si 1.86799 * 119.99853 * 355.51357 * 16 14 12 19 19 H 1.48504 * 109.46935 * 275.01847 * 18 16 14 20 20 H 1.48495 * 109.47495 * 35.01854 * 18 16 14 21 21 H 1.48493 * 109.47134 * 155.02035 * 18 16 14 22 22 H 1.09000 * 109.47194 * 296.68513 * 1 2 3 23 23 H 1.09004 * 109.47497 * 56.68320 * 1 2 3 24 24 H 1.08999 * 109.47367 * 176.68290 * 1 2 3 25 25 H 1.07997 * 119.87910 * 1.02563 * 6 5 4 26 26 H 1.08001 * 120.12228 * 179.79096 * 9 7 6 27 27 H 1.08003 * 119.99875 * 180.02562 * 10 9 7 28 28 H 0.96997 * 119.99478 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9172 1.0189 0.0000 4 8 2.0393 -0.7385 -1.1235 5 6 3.1955 -1.3609 -0.7643 6 6 4.2096 -1.8891 -1.5595 7 6 5.3004 -2.5033 -0.9778 8 17 6.5589 -3.1576 -1.9788 9 6 5.3954 -2.6005 0.3996 10 6 4.3933 -2.0754 1.1956 11 6 3.3063 -1.4583 0.6168 12 6 2.0784 -0.7941 1.2089 13 1 1.3568 -1.5386 1.5454 14 6 2.4576 0.1321 2.3356 15 1 3.0518 1.0113 2.1351 16 6 2.0458 -0.1429 3.6225 17 7 2.4539 0.6121 4.6190 18 14 0.9145 -1.5926 3.9514 19 1 -0.4957 -1.1778 3.7403 20 1 1.2485 -2.7019 3.0224 21 1 1.0913 -2.0504 5.3529 22 1 -0.3633 0.4615 0.9182 23 1 -0.3634 0.5645 -0.8588 24 1 -0.3634 -1.0259 -0.0595 25 1 4.1425 -1.8171 -2.6350 26 1 6.2486 -3.0848 0.8512 27 1 4.4636 -2.1487 2.2708 28 1 2.1645 0.4183 5.5243 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260349561.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:40 Heat of formation + Delta-G solvation = -22.466899 kcal Electronic energy + Delta-G solvation = -14628.518416 eV Core-core repulsion = 12056.384623 eV Total energy + Delta-G solvation = -2572.133793 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -40.51874 -37.34609 -35.85728 -33.73524 -31.74989 -30.31950 -29.67295 -26.97547 -24.00353 -22.15997 -21.02846 -20.19490 -17.51762 -16.90684 -15.83576 -15.54759 -14.81044 -14.31034 -13.73101 -13.29510 -13.17509 -12.95123 -12.61413 -12.39254 -12.13938 -11.77374 -11.16886 -11.08658 -10.99519 -10.80071 -10.47432 -10.21248 -10.00191 -9.78381 -9.62293 -8.75520 -8.29313 -7.52315 -6.30783 -4.33491 1.66476 1.80834 2.34097 3.12796 3.22352 3.23451 3.90521 4.18227 4.20856 4.91609 5.23435 5.36504 5.56585 5.63076 5.68772 5.75649 6.01204 6.04274 6.20239 6.28228 6.43485 6.57678 6.62061 6.77298 6.86460 6.97346 7.13739 7.44285 7.75874 8.25503 8.73416 9.28975 10.81081 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.029281 B = 0.008324 C = 0.007084 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 956.025480 B = 3362.990683 C = 3951.696118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.075 3.925 3 H 0.086 0.914 4 O -0.315 6.315 5 C 0.107 3.893 6 C -0.144 4.144 7 C -0.018 4.018 8 Cl -0.085 7.085 9 C -0.145 4.145 10 C -0.053 4.053 11 C -0.125 4.125 12 C 0.021 3.979 13 H 0.068 0.932 14 C -0.508 4.508 15 H 0.079 0.921 16 C 0.080 3.920 17 N -0.886 5.886 18 Si 0.870 3.130 19 H -0.270 1.270 20 H -0.263 1.263 21 H -0.284 1.284 22 H 0.082 0.918 23 H 0.056 0.944 24 H 0.056 0.944 25 H 0.127 0.873 26 H 0.129 0.871 27 H 0.134 0.866 28 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.466 -5.543 -8.400 10.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.020 3.980 3 H 0.104 0.896 4 O -0.230 6.230 5 C 0.061 3.939 6 C -0.164 4.164 7 C -0.044 4.044 8 Cl -0.056 7.056 9 C -0.164 4.164 10 C -0.072 4.072 11 C -0.126 4.126 12 C 0.003 3.997 13 H 0.086 0.914 14 C -0.545 4.545 15 H 0.097 0.903 16 C -0.124 4.124 17 N -0.522 5.522 18 Si 0.697 3.303 19 H -0.196 1.196 20 H -0.188 1.188 21 H -0.210 1.210 22 H 0.100 0.900 23 H 0.075 0.925 24 H 0.075 0.925 25 H 0.145 0.855 26 H 0.147 0.853 27 H 0.151 0.849 28 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 1.433 -5.541 -8.469 10.221 hybrid contribution -0.387 -0.688 0.350 0.863 sum 1.046 -6.229 -8.119 10.286 Atomic orbital electron populations 1.21788 0.93250 1.02210 1.02560 1.23807 0.94817 0.95976 0.83450 0.89569 1.86718 1.33998 1.62605 1.39629 1.19374 0.87096 0.94582 0.92869 1.19763 0.92235 1.04803 0.99564 1.20198 0.91065 1.02168 0.91017 1.98323 1.52133 1.85045 1.70095 1.20862 1.00624 1.03876 0.91023 1.20297 0.91400 0.95162 1.00315 1.21759 0.98947 0.98629 0.93286 1.19663 0.90507 0.94932 0.94634 0.91429 1.20687 1.34716 1.09364 0.89781 0.90272 1.25080 0.95420 0.95986 0.95923 1.69880 1.43444 1.38989 0.99911 0.86955 0.81930 0.83640 0.77813 1.19565 1.18817 1.21027 0.89957 0.92511 0.92477 0.85473 0.85310 0.84853 0.92168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.38 9.58 37.16 0.36 -2.02 15 2 C 0.07 1.50 3.79 -25.85 -0.10 1.40 15 3 H 0.09 1.75 7.91 -51.93 -0.41 1.34 15 4 O -0.31 -6.35 10.81 -20.17 -0.22 -6.57 15 5 C 0.11 2.15 7.04 -38.96 -0.27 1.87 15 6 C -0.14 -2.55 9.84 -39.27 -0.39 -2.93 15 7 C -0.02 -0.30 6.31 -39.59 -0.25 -0.55 15 8 Cl -0.08 -1.20 28.94 -51.86 -1.50 -2.70 15 9 C -0.14 -2.46 9.84 -39.48 -0.39 -2.85 15 10 C -0.05 -1.05 9.92 -39.73 -0.39 -1.44 15 11 C -0.12 -2.67 5.68 -104.09 -0.59 -3.26 15 12 C 0.02 0.48 2.51 -91.57 -0.23 0.25 15 13 H 0.07 1.53 4.52 -51.93 -0.23 1.30 15 14 C -0.51 -13.15 8.83 -34.44 -0.30 -13.46 15 15 H 0.08 2.26 8.06 -52.49 -0.42 1.84 15 16 C 0.08 2.12 5.47 -17.82 -0.10 2.02 15 17 N -0.89 -25.13 13.96 55.43 0.77 -24.36 15 18 Si 0.87 19.79 27.20 -169.99 -4.62 15.17 15 19 H -0.27 -5.96 7.11 56.52 0.40 -5.56 15 20 H -0.26 -5.83 6.47 56.52 0.37 -5.47 15 21 H -0.28 -6.49 7.11 56.52 0.40 -6.09 15 22 H 0.08 1.39 8.14 -51.93 -0.42 0.97 15 23 H 0.06 0.82 8.14 -51.93 -0.42 0.40 15 24 H 0.06 0.92 8.14 -51.93 -0.42 0.50 15 25 H 0.13 1.99 8.06 -52.49 -0.42 1.57 15 26 H 0.13 1.86 8.06 -52.49 -0.42 1.43 15 27 H 0.13 2.61 8.06 -52.48 -0.42 2.19 15 28 H 0.27 7.14 8.31 -40.82 -0.34 6.80 15 LS Contribution 257.78 15.07 3.88 3.88 Total: -1.00 -27.20 257.78 -7.12 -34.32 By element: Atomic # 1 Polarization: 4.00 SS G_CDS: -2.78 Total: 1.23 kcal Atomic # 6 Polarization: -18.32 SS G_CDS: -2.66 Total: -20.98 kcal Atomic # 7 Polarization: -25.13 SS G_CDS: 0.77 Total: -24.36 kcal Atomic # 8 Polarization: -6.35 SS G_CDS: -0.22 Total: -6.57 kcal Atomic # 14 Polarization: 19.79 SS G_CDS: -4.62 Total: 15.17 kcal Atomic # 17 Polarization: -1.20 SS G_CDS: -1.50 Total: -2.70 kcal Total LS contribution 3.88 Total: 3.88 kcal Total: -27.20 -7.12 -34.32 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260349561.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.854 kcal (2) G-P(sol) polarization free energy of solvation -27.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.321 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds