Wall clock time and date at job start Mon Mar 30 2020 05:39:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.08996 * 110.66381 * 2 1 4 4 O 1.43760 * 110.90536 * 236.67966 * 2 1 3 5 5 C 1.36128 * 109.28756 * 214.04290 * 4 2 1 6 6 C 1.39269 * 129.86354 * 198.54036 * 5 4 2 7 7 C 1.38042 * 120.23230 * 180.43523 * 6 5 4 8 8 Cl 1.73604 * 119.83996 * 179.97438 * 7 6 5 9 9 C 1.38404 * 120.32481 * 0.02562 * 7 6 5 10 10 C 1.38322 * 119.75233 * 359.80132 * 9 7 6 11 11 C 1.37757 * 119.99544 * 0.02562 * 10 9 7 12 12 C 1.51647 * 132.16386 * 180.37346 * 11 10 9 13 13 H 1.09004 * 110.93935 * 46.15659 * 12 11 10 14 14 C 1.50697 * 110.94118 * 282.46398 * 12 11 10 15 15 H 1.07999 * 120.00341 * 252.83382 * 14 12 11 16 16 C 1.37882 * 119.99976 * 72.83460 * 14 12 11 17 17 N 1.31511 * 120.00275 * 359.97438 * 16 14 12 18 18 Si 1.86797 * 120.00069 * 179.97438 * 16 14 12 19 19 H 1.48502 * 109.47194 * 359.97438 * 18 16 14 20 20 H 1.48499 * 109.47287 * 119.99777 * 18 16 14 21 21 H 1.48499 * 109.47209 * 239.99896 * 18 16 14 22 22 H 1.09000 * 109.47570 * 289.11497 * 1 2 3 23 23 H 1.08999 * 109.47115 * 49.11764 * 1 2 3 24 24 H 1.09004 * 109.47275 * 169.11991 * 1 2 3 25 25 H 1.07998 * 119.88463 * 0.41888 * 6 5 4 26 26 H 1.08007 * 120.12486 * 179.82116 * 9 7 6 27 27 H 1.08004 * 120.00890 * 180.02562 * 10 9 7 28 28 H 0.96998 * 120.00441 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9146 1.0198 0.0000 4 8 2.0429 -0.7377 -1.1222 5 6 3.1980 -1.3608 -0.7606 6 6 4.2153 -1.8854 -1.5539 7 6 5.3097 -2.4913 -0.9700 8 17 6.5717 -3.1424 -1.9686 9 6 5.4052 -2.5832 0.4077 10 6 4.4001 -2.0611 1.2018 11 6 3.3091 -1.4530 0.6208 12 6 2.0773 -0.7938 1.2104 13 1 2.3472 -0.1224 2.0256 14 6 1.0827 -1.8271 1.6731 15 1 0.1731 -1.9896 1.1139 16 6 1.3340 -2.5651 2.8104 17 7 2.4418 -2.3676 3.4910 18 14 0.1009 -3.8454 3.3843 19 1 -1.0545 -3.8731 2.4517 20 1 0.7494 -5.1811 3.4094 21 1 -0.3731 -3.4996 4.7485 22 1 -0.3634 0.3365 0.9710 23 1 -0.3633 0.6726 -0.7770 24 1 -0.3634 -1.0092 -0.1940 25 1 4.1478 -1.8182 -2.6297 26 1 6.2615 -3.0605 0.8610 27 1 4.4706 -2.1302 2.2773 28 1 2.6184 -2.8865 4.2913 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260349563.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:44 Heat of formation + Delta-G solvation = -19.461323 kcal Electronic energy + Delta-G solvation = -14780.057629 eV Core-core repulsion = 12208.054168 eV Total energy + Delta-G solvation = -2572.003461 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -40.27998 -37.10356 -35.62541 -33.73819 -31.40609 -29.97285 -29.38288 -26.24509 -24.41717 -21.86442 -20.77378 -20.23888 -17.20569 -16.29055 -15.82314 -15.18374 -14.60771 -14.46266 -13.41770 -13.17304 -12.93802 -12.53883 -12.43284 -12.12274 -11.57919 -11.40748 -11.04906 -10.94818 -10.86241 -10.67057 -10.39341 -10.30309 -9.96719 -9.43721 -9.26615 -8.65667 -7.97236 -7.25885 -6.22722 -4.28131 1.97966 2.11907 2.56807 3.19860 3.28959 3.31943 4.14943 4.26443 4.50137 5.09034 5.55199 5.63135 5.75292 5.78672 5.87772 5.98491 6.22680 6.35946 6.42196 6.53258 6.78831 6.87889 6.88793 7.16119 7.22735 7.40925 7.60126 7.73961 7.97552 8.09254 8.73924 9.36934 10.84582 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.025154 B = 0.009106 C = 0.007368 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1112.870499 B = 3074.103822 C = 3799.165750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 C 0.073 3.927 3 H 0.064 0.936 4 O -0.308 6.308 5 C 0.099 3.901 6 C -0.149 4.149 7 C -0.024 4.024 8 Cl -0.094 7.094 9 C -0.151 4.151 10 C -0.050 4.050 11 C -0.101 4.101 12 C 0.057 3.943 13 H 0.060 0.940 14 C -0.510 4.510 15 H 0.073 0.927 16 C 0.068 3.932 17 N -0.882 5.882 18 Si 0.896 3.104 19 H -0.271 1.271 20 H -0.283 1.283 21 H -0.282 1.282 22 H 0.077 0.923 23 H 0.039 0.961 24 H 0.071 0.929 25 H 0.122 0.878 26 H 0.122 0.878 27 H 0.149 0.851 28 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.935 1.855 -5.015 6.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C 0.018 3.982 3 H 0.081 0.919 4 O -0.223 6.223 5 C 0.053 3.947 6 C -0.169 4.169 7 C -0.051 4.051 8 Cl -0.065 7.065 9 C -0.170 4.170 10 C -0.069 4.069 11 C -0.102 4.102 12 C 0.039 3.961 13 H 0.078 0.922 14 C -0.547 4.547 15 H 0.091 0.909 16 C -0.136 4.136 17 N -0.519 5.519 18 Si 0.724 3.276 19 H -0.196 1.196 20 H -0.209 1.209 21 H -0.208 1.208 22 H 0.096 0.904 23 H 0.059 0.941 24 H 0.090 0.910 25 H 0.140 0.860 26 H 0.140 0.860 27 H 0.167 0.833 28 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 2.999 1.750 -5.144 6.206 hybrid contribution -0.377 -0.943 0.376 1.083 sum 2.622 0.808 -4.767 5.501 Atomic orbital electron populations 1.21739 0.92916 1.02496 1.01415 1.23501 0.95578 0.93830 0.85329 0.91854 1.86700 1.34355 1.62508 1.38727 1.19381 0.86937 0.95102 0.93230 1.19653 0.92446 1.05633 0.99170 1.20152 0.90955 1.03049 0.90907 1.98303 1.52294 1.85404 1.70523 1.20908 1.00969 1.04203 0.90968 1.20679 0.90800 0.94063 1.01333 1.21667 0.95971 0.99820 0.92751 1.19167 0.89673 0.94644 0.92650 0.92225 1.21155 1.04243 1.20051 1.09238 0.90858 1.24991 0.95486 0.96940 0.96147 1.69872 1.24336 1.40485 1.17221 0.86458 0.81302 0.81299 0.78590 1.19578 1.20859 1.20827 0.90372 0.94148 0.91029 0.85998 0.85952 0.83320 0.92666 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.32 8.48 37.16 0.31 -2.01 15 2 C 0.07 1.49 4.16 -25.81 -0.11 1.38 15 3 H 0.06 1.17 8.14 -51.93 -0.42 0.75 15 4 O -0.31 -6.74 10.81 -20.15 -0.22 -6.96 15 5 C 0.10 2.19 7.04 -38.96 -0.27 1.91 15 6 C -0.15 -2.95 9.84 -39.27 -0.39 -3.33 15 7 C -0.02 -0.45 6.31 -39.59 -0.25 -0.70 15 8 Cl -0.09 -1.49 28.94 -51.86 -1.50 -2.99 15 9 C -0.15 -2.93 9.84 -39.49 -0.39 -3.32 15 10 C -0.05 -1.11 9.51 -39.73 -0.38 -1.49 15 11 C -0.10 -2.33 5.42 -104.09 -0.56 -2.90 15 12 C 0.06 1.35 2.78 -91.54 -0.25 1.09 15 13 H 0.06 1.48 8.13 -51.93 -0.42 1.05 15 14 C -0.51 -12.91 7.80 -34.44 -0.27 -13.18 15 15 H 0.07 1.84 5.44 -52.49 -0.29 1.55 15 16 C 0.07 1.74 5.40 -17.82 -0.10 1.64 15 17 N -0.88 -23.08 11.25 55.43 0.62 -22.46 15 18 Si 0.90 20.24 29.54 -169.99 -5.02 15.22 15 19 H -0.27 -6.08 7.11 56.52 0.40 -5.67 15 20 H -0.28 -6.48 7.11 56.52 0.40 -6.08 15 21 H -0.28 -6.31 7.11 56.52 0.40 -5.91 15 22 H 0.08 1.36 8.04 -51.93 -0.42 0.94 15 23 H 0.04 0.62 8.14 -51.93 -0.42 0.19 15 24 H 0.07 1.39 6.49 -51.93 -0.34 1.05 15 25 H 0.12 2.16 8.06 -52.49 -0.42 1.73 15 26 H 0.12 2.07 8.06 -52.48 -0.42 1.65 15 27 H 0.15 3.43 6.68 -52.48 -0.35 3.08 15 28 H 0.26 6.60 8.31 -40.82 -0.34 6.26 15 LS Contribution 253.93 15.07 3.83 3.83 Total: -1.00 -26.09 253.93 -7.58 -33.67 By element: Atomic # 1 Polarization: 3.23 SS G_CDS: -2.64 Total: 0.59 kcal Atomic # 6 Polarization: -18.25 SS G_CDS: -2.65 Total: -20.90 kcal Atomic # 7 Polarization: -23.08 SS G_CDS: 0.62 Total: -22.46 kcal Atomic # 8 Polarization: -6.74 SS G_CDS: -0.22 Total: -6.96 kcal Atomic # 14 Polarization: 20.24 SS G_CDS: -5.02 Total: 15.22 kcal Atomic # 17 Polarization: -1.49 SS G_CDS: -1.50 Total: -2.99 kcal Total LS contribution 3.83 Total: 3.83 kcal Total: -26.09 -7.58 -33.67 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260349563.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.205 kcal (2) G-P(sol) polarization free energy of solvation -26.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.666 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.461 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds