Wall clock time and date at job start Mon Mar 30 2020 05:39:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.09002 * 110.80650 * 2 1 4 4 O 1.43774 * 110.74758 * 123.31158 * 2 1 3 5 5 C 1.36136 * 109.23652 * 90.58095 * 4 2 1 6 6 C 1.39268 * 129.87744 * 198.41314 * 5 4 2 7 7 C 1.38044 * 120.23115 * 181.01756 * 6 5 4 8 8 Cl 1.73601 * 119.83517 * 179.97438 * 7 6 5 9 9 C 1.38402 * 120.32568 * 359.95833 * 7 6 5 10 10 C 1.38327 * 119.75078 * 359.84617 * 9 7 6 11 11 C 1.37752 * 119.99751 * 0.02562 * 10 9 7 12 12 C 1.51652 * 132.15476 * 180.36127 * 11 10 9 13 13 H 1.08995 * 110.93708 * 46.38497 * 12 11 10 14 14 C 1.50702 * 110.93444 * 282.73693 * 12 11 10 15 15 H 1.07995 * 120.00323 * 324.81931 * 14 12 11 16 16 C 1.37875 * 119.99578 * 144.81213 * 14 12 11 17 17 N 1.31516 * 120.00042 * 186.95623 * 16 14 12 18 18 Si 1.86806 * 120.00154 * 6.96059 * 16 14 12 19 19 H 1.48495 * 109.46985 * 275.15167 * 18 16 14 20 20 H 1.48497 * 109.46922 * 35.15459 * 18 16 14 21 21 H 1.48504 * 109.46918 * 155.15530 * 18 16 14 22 22 H 1.08999 * 109.47198 * 183.31885 * 1 2 3 23 23 H 1.08997 * 109.47091 * 303.31575 * 1 2 3 24 24 H 1.08997 * 109.47492 * 63.31855 * 1 2 3 25 25 H 1.07996 * 119.88143 * 0.97429 * 6 5 4 26 26 H 1.07999 * 120.12561 * 179.87742 * 9 7 6 27 27 H 1.08004 * 119.99947 * 180.02562 * 10 9 7 28 28 H 0.96996 * 120.00497 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9172 1.0189 0.0000 4 8 2.0393 -0.7384 1.1236 5 6 2.2104 -2.0403 0.7644 6 6 2.3429 -3.1760 1.5596 7 6 2.5306 -4.4137 0.9779 8 17 2.6952 -5.8225 1.9789 9 6 2.5877 -4.5371 -0.3995 10 6 2.4528 -3.4139 -1.1955 11 6 2.2629 -2.1784 -0.6167 12 6 2.0784 -0.7945 -1.2089 13 1 1.3549 -0.8129 -2.0239 14 6 3.3951 -0.2279 -1.6739 15 1 4.2998 -0.4432 -1.1247 16 6 3.4449 0.5653 -2.8005 17 7 4.6063 0.9470 -3.2853 18 14 1.8625 1.0979 -3.6385 19 1 1.4169 0.0357 -4.5756 20 1 0.8124 1.3264 -2.6137 21 1 2.1005 2.3551 -4.3922 22 1 -0.3633 -1.0259 0.0595 23 1 -0.3633 0.5644 0.8588 24 1 -0.3634 0.4614 -0.9182 25 1 2.2995 -3.0878 2.6350 26 1 2.7366 -5.5068 -0.8511 27 1 2.4963 -3.5056 -2.2707 28 1 4.6413 1.5054 -4.0776 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260349565.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:46 Heat of formation + Delta-G solvation = -22.294641 kcal Electronic energy + Delta-G solvation = -14661.830433 eV Core-core repulsion = 12089.704110 eV Total energy + Delta-G solvation = -2572.126323 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -40.58971 -37.36116 -35.86497 -33.60249 -31.79455 -30.13394 -29.70750 -27.31582 -23.77253 -22.35957 -21.02970 -20.31096 -17.25179 -16.69220 -16.12458 -15.49099 -14.97546 -14.41121 -13.61353 -13.40967 -13.05553 -12.93128 -12.83995 -12.35347 -11.99259 -11.65074 -11.35933 -11.07614 -10.99163 -10.77944 -10.58837 -10.22636 -10.09458 -9.91431 -9.53833 -8.74128 -8.32763 -7.51370 -6.29677 -4.31509 1.64182 1.78636 2.33197 3.12223 3.20038 3.22922 3.96900 4.14917 4.20633 4.91599 5.20640 5.36513 5.54503 5.57790 5.61386 5.68542 5.90437 5.95134 6.20280 6.23932 6.41073 6.52919 6.64273 6.66572 6.80735 7.01872 7.09421 7.41648 7.76841 8.28211 8.78289 9.29352 10.82334 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.035288 B = 0.007656 C = 0.006977 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 793.285138 B = 3656.379383 C = 4012.148217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.065 3.935 3 H 0.116 0.884 4 O -0.298 6.298 5 C 0.116 3.884 6 C -0.145 4.145 7 C -0.017 4.017 8 Cl -0.084 7.084 9 C -0.145 4.145 10 C -0.064 4.064 11 C -0.120 4.120 12 C 0.032 3.968 13 H 0.061 0.939 14 C -0.509 4.509 15 H 0.079 0.921 16 C 0.079 3.921 17 N -0.885 5.885 18 Si 0.871 3.129 19 H -0.272 1.272 20 H -0.261 1.261 21 H -0.284 1.284 22 H 0.055 0.945 23 H 0.057 0.943 24 H 0.070 0.930 25 H 0.128 0.872 26 H 0.129 0.871 27 H 0.130 0.870 28 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.364 -7.277 5.320 11.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.009 3.991 3 H 0.133 0.867 4 O -0.211 6.211 5 C 0.070 3.930 6 C -0.164 4.164 7 C -0.043 4.043 8 Cl -0.055 7.055 9 C -0.164 4.164 10 C -0.082 4.082 11 C -0.121 4.121 12 C 0.013 3.987 13 H 0.079 0.921 14 C -0.546 4.546 15 H 0.097 0.903 16 C -0.125 4.125 17 N -0.520 5.520 18 Si 0.698 3.302 19 H -0.198 1.198 20 H -0.186 1.186 21 H -0.210 1.210 22 H 0.074 0.926 23 H 0.076 0.924 24 H 0.089 0.911 25 H 0.146 0.854 26 H 0.147 0.853 27 H 0.148 0.852 28 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -7.200 -7.148 5.458 11.521 hybrid contribution -0.643 0.262 -0.564 0.895 sum -7.843 -6.886 4.894 11.528 Atomic orbital electron populations 1.22318 0.96333 1.02056 1.02174 1.24103 0.92149 0.97445 0.85418 0.86655 1.86797 1.79613 1.15708 1.39029 1.19363 0.95581 0.85404 0.92681 1.19788 1.08547 0.88388 0.99677 1.20189 1.06169 0.86946 0.91013 1.98325 1.96465 1.40653 1.70090 1.20787 1.05270 0.99298 0.91057 1.20227 0.97802 0.90188 1.00025 1.21428 1.00093 0.96674 0.93895 1.19500 0.98393 0.86917 0.93858 0.92142 1.20680 0.92071 1.30562 1.11284 0.90330 1.25071 0.96128 0.95294 0.96057 1.69888 1.24335 1.35272 1.22536 0.86952 0.84198 0.78810 0.80251 1.19781 1.18589 1.21034 0.92628 0.92438 0.91135 0.85395 0.85318 0.85192 0.92139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.86 9.51 37.16 0.35 -2.51 15 2 C 0.06 1.32 3.85 -25.83 -0.10 1.22 15 3 H 0.12 2.39 7.92 -51.93 -0.41 1.98 15 4 O -0.30 -6.28 10.82 -20.17 -0.22 -6.49 15 5 C 0.12 2.35 6.90 -38.96 -0.27 2.08 15 6 C -0.14 -2.56 9.84 -39.27 -0.39 -2.94 15 7 C -0.02 -0.27 6.31 -39.59 -0.25 -0.52 15 8 Cl -0.08 -1.17 28.94 -51.86 -1.50 -2.67 15 9 C -0.15 -2.36 9.84 -39.49 -0.39 -2.75 15 10 C -0.06 -1.18 10.03 -39.73 -0.40 -1.58 15 11 C -0.12 -2.50 5.60 -104.09 -0.58 -3.08 15 12 C 0.03 0.73 2.17 -91.55 -0.20 0.53 15 13 H 0.06 1.31 5.51 -51.93 -0.29 1.03 15 14 C -0.51 -13.59 8.90 -34.44 -0.31 -13.89 15 15 H 0.08 2.37 8.06 -52.49 -0.42 1.95 15 16 C 0.08 2.12 5.47 -17.82 -0.10 2.02 15 17 N -0.88 -25.59 13.96 55.43 0.77 -24.82 15 18 Si 0.87 19.58 26.86 -169.99 -4.57 15.02 15 19 H -0.27 -6.01 7.11 56.52 0.40 -5.61 15 20 H -0.26 -5.42 6.49 56.52 0.37 -5.05 15 21 H -0.28 -6.43 7.11 56.52 0.40 -6.03 15 22 H 0.05 0.90 8.07 -51.93 -0.42 0.48 15 23 H 0.06 0.85 8.14 -51.93 -0.42 0.42 15 24 H 0.07 1.13 7.53 -51.93 -0.39 0.74 15 25 H 0.13 2.03 8.06 -52.49 -0.42 1.61 15 26 H 0.13 1.74 8.06 -52.49 -0.42 1.32 15 27 H 0.13 2.22 8.06 -52.48 -0.42 1.79 15 28 H 0.27 7.24 8.31 -40.82 -0.34 6.90 15 LS Contribution 257.42 15.07 3.88 3.88 Total: -1.00 -27.95 257.42 -7.05 -34.99 By element: Atomic # 1 Polarization: 4.32 SS G_CDS: -2.79 Total: 1.53 kcal Atomic # 6 Polarization: -18.81 SS G_CDS: -2.62 Total: -21.43 kcal Atomic # 7 Polarization: -25.59 SS G_CDS: 0.77 Total: -24.82 kcal Atomic # 8 Polarization: -6.28 SS G_CDS: -0.22 Total: -6.49 kcal Atomic # 14 Polarization: 19.58 SS G_CDS: -4.57 Total: 15.02 kcal Atomic # 17 Polarization: -1.17 SS G_CDS: -1.50 Total: -2.67 kcal Total LS contribution 3.88 Total: 3.88 kcal Total: -27.95 -7.05 -34.99 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260349565.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.699 kcal (2) G-P(sol) polarization free energy of solvation -27.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.048 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.994 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds