Wall clock time and date at job start Mon Mar 30 2020 05:39:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.08995 * 110.67098 * 2 1 4 4 O 1.43761 * 110.90494 * 236.67439 * 2 1 3 5 5 C 1.36153 * 109.28513 * 214.05307 * 4 2 1 6 6 C 1.38964 * 111.26316 * 18.58944 * 5 4 2 7 7 C 1.37664 * 120.78041 * 179.43573 * 6 5 4 8 8 C 1.38377 * 120.02736 * 0.38114 * 7 6 5 9 9 C 1.38244 * 119.77685 * 359.97438 * 8 7 6 10 10 C 1.38068 * 120.33542 * 359.83119 * 9 8 7 11 11 Cl 1.73596 * 119.88628 * 180.02562 * 10 9 8 12 12 C 1.51641 * 106.98347 * 359.40646 * 6 5 4 13 13 H 1.09006 * 110.94042 * 226.11383 * 12 6 5 14 14 C 1.50698 * 110.94274 * 102.45966 * 12 6 5 15 15 H 1.08004 * 120.00066 * 249.21983 * 14 12 6 16 16 C 1.37878 * 120.00273 * 69.21665 * 14 12 6 17 17 N 1.31518 * 119.99851 * 0.02562 * 16 14 12 18 18 Si 1.86796 * 120.00278 * 180.27728 * 16 14 12 19 19 H 1.48507 * 109.47192 * 269.72843 * 18 16 14 20 20 H 1.48504 * 109.46985 * 29.72263 * 18 16 14 21 21 H 1.48498 * 109.47587 * 149.72484 * 18 16 14 22 22 H 1.09002 * 109.47449 * 289.16785 * 1 2 3 23 23 H 1.09001 * 109.47258 * 49.16227 * 1 2 3 24 24 H 1.08999 * 109.47562 * 169.16285 * 1 2 3 25 25 H 1.08004 * 119.96682 * 180.34856 * 7 6 5 26 26 H 1.08000 * 120.10891 * 179.97438 * 8 7 6 27 27 H 1.08004 * 119.83028 * 179.80170 * 9 8 7 28 28 H 0.97006 * 120.00014 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9147 1.0198 0.0000 4 8 2.0429 -0.7378 -1.1221 5 6 3.1980 -1.3612 -0.7603 6 6 3.3100 -1.4522 0.6218 7 6 4.4009 -2.0595 1.2018 8 6 5.4065 -2.5814 0.4073 9 6 5.3110 -2.4910 -0.9688 10 6 4.2163 -1.8861 -1.5536 11 17 4.1080 -1.7796 -3.2829 12 6 2.0780 -0.7925 1.2104 13 1 2.3475 -0.1212 2.0258 14 6 1.0830 -1.8254 1.6731 15 1 0.1474 -1.9475 1.1475 16 6 1.3670 -2.6146 2.7675 17 7 2.5060 -2.4656 3.4078 18 14 0.1370 -3.9002 3.3364 19 1 -0.7862 -3.2963 4.3306 20 1 -0.6423 -4.3896 2.1708 21 1 0.8614 -5.0367 3.9600 22 1 -0.3634 0.3374 0.9707 23 1 -0.3634 0.6720 -0.7775 24 1 -0.3634 -1.0093 -0.1932 25 1 4.4717 -2.1280 2.2773 26 1 6.2631 -3.0578 0.8609 27 1 6.0970 -2.8952 -1.5896 28 1 2.7057 -3.0205 4.1780 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260400054.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:50 Heat of formation + Delta-G solvation = -18.013049 kcal Electronic energy + Delta-G solvation = -14919.276022 eV Core-core repulsion = 12347.335363 eV Total energy + Delta-G solvation = -2571.940660 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -40.25381 -36.88510 -35.68524 -33.68382 -31.35493 -30.10477 -29.06654 -26.32847 -24.45021 -21.68836 -20.84123 -20.22738 -17.13910 -16.21283 -15.92330 -15.07687 -14.60625 -14.41244 -13.61148 -13.22929 -12.75659 -12.52721 -12.12385 -12.01317 -11.51988 -11.38305 -11.00126 -10.88553 -10.79655 -10.47005 -10.43130 -10.37468 -9.99691 -9.45589 -9.31336 -8.63855 -7.79465 -7.25863 -6.21423 -4.27295 2.05232 2.12963 2.80721 3.20935 3.28537 3.32286 4.03540 4.27504 4.52758 5.09941 5.52589 5.66784 5.78261 5.86669 5.88520 6.03001 6.25806 6.29461 6.45408 6.54523 6.82044 6.89217 6.90995 7.21409 7.25975 7.47981 7.64920 7.75281 7.97690 8.09253 8.73959 9.37830 10.85192 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.026335 B = 0.009905 C = 0.008302 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1062.957308 B = 2826.116280 C = 3372.002459 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 C 0.073 3.927 3 H 0.063 0.937 4 O -0.301 6.301 5 C 0.100 3.900 6 C -0.095 4.095 7 C -0.054 4.054 8 C -0.155 4.155 9 C -0.108 4.108 10 C -0.068 4.068 11 Cl -0.096 7.096 12 C 0.059 3.941 13 H 0.057 0.943 14 C -0.511 4.511 15 H 0.074 0.926 16 C 0.067 3.933 17 N -0.882 5.882 18 Si 0.896 3.104 19 H -0.279 1.279 20 H -0.273 1.273 21 H -0.285 1.285 22 H 0.077 0.923 23 H 0.040 0.960 24 H 0.071 0.929 25 H 0.149 0.851 26 H 0.121 0.879 27 H 0.124 0.876 28 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.827 2.008 -4.871 5.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C 0.017 3.983 3 H 0.081 0.919 4 O -0.215 6.215 5 C 0.054 3.946 6 C -0.097 4.097 7 C -0.072 4.072 8 C -0.173 4.173 9 C -0.127 4.127 10 C -0.095 4.095 11 Cl -0.068 7.068 12 C 0.041 3.959 13 H 0.075 0.925 14 C -0.548 4.548 15 H 0.092 0.908 16 C -0.136 4.136 17 N -0.519 5.519 18 Si 0.724 3.276 19 H -0.205 1.205 20 H -0.198 1.198 21 H -0.211 1.211 22 H 0.096 0.904 23 H 0.059 0.941 24 H 0.090 0.910 25 H 0.166 0.834 26 H 0.139 0.861 27 H 0.142 0.858 28 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 2.777 1.956 -5.075 6.107 hybrid contribution -0.505 -0.890 0.312 1.070 sum 2.271 1.066 -4.763 5.383 Atomic orbital electron populations 1.21740 0.92933 1.02532 1.01377 1.23484 0.95596 0.93844 0.85377 0.91874 1.86761 1.34074 1.62227 1.38437 1.19354 0.86864 0.95482 0.92931 1.21516 0.96250 1.00456 0.91494 1.20909 0.90900 0.93502 1.01910 1.20976 1.00314 1.03586 0.92452 1.20468 0.96260 1.00793 0.95197 1.19948 0.96565 1.10477 0.82461 1.98291 1.98366 1.97571 1.12527 1.19140 0.89650 0.94542 0.92587 0.92464 1.21151 1.02417 1.18840 1.12402 0.90819 1.24984 0.95449 0.97065 0.96069 1.69854 1.22484 1.39675 1.19930 0.86507 0.81097 0.81071 0.78940 1.20453 1.19750 1.21071 0.90420 0.94096 0.90995 0.83372 0.86137 0.85833 0.92656 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.37 8.44 37.16 0.31 -2.05 15 2 C 0.07 1.51 4.16 -25.83 -0.11 1.40 15 3 H 0.06 1.19 8.14 -51.93 -0.42 0.77 15 4 O -0.30 -6.77 10.80 -20.23 -0.22 -6.99 15 5 C 0.10 2.26 6.83 -38.90 -0.27 1.99 15 6 C -0.10 -2.24 5.37 -104.10 -0.56 -2.80 15 7 C -0.05 -1.19 9.33 -39.74 -0.37 -1.56 15 8 C -0.15 -2.90 10.07 -39.53 -0.40 -3.30 15 9 C -0.11 -1.98 9.79 -39.64 -0.39 -2.37 15 10 C -0.07 -1.37 6.34 -39.23 -0.25 -1.62 15 11 Cl -0.10 -1.73 28.94 -51.86 -1.50 -3.23 15 12 C 0.06 1.41 2.83 -91.56 -0.26 1.15 15 13 H 0.06 1.42 8.14 -51.93 -0.42 1.00 15 14 C -0.51 -13.04 7.88 -34.44 -0.27 -13.31 15 15 H 0.07 1.85 5.36 -52.48 -0.28 1.57 15 16 C 0.07 1.74 5.38 -17.82 -0.10 1.64 15 17 N -0.88 -23.06 10.80 55.43 0.60 -22.46 15 18 Si 0.90 20.33 29.54 -169.99 -5.02 15.30 15 19 H -0.28 -6.21 7.11 56.52 0.40 -5.81 15 20 H -0.27 -6.23 7.11 56.52 0.40 -5.83 15 21 H -0.29 -6.49 7.11 56.52 0.40 -6.09 15 22 H 0.08 1.36 8.04 -51.93 -0.42 0.94 15 23 H 0.04 0.64 8.14 -51.93 -0.42 0.22 15 24 H 0.07 1.42 6.52 -51.93 -0.34 1.08 15 25 H 0.15 3.42 6.47 -52.48 -0.34 3.08 15 26 H 0.12 1.88 8.06 -52.49 -0.42 1.46 15 27 H 0.12 1.88 8.06 -52.48 -0.42 1.46 15 28 H 0.26 6.61 8.31 -40.82 -0.34 6.27 15 LS Contribution 253.04 15.07 3.81 3.81 Total: -1.00 -26.66 253.04 -7.60 -34.26 By element: Atomic # 1 Polarization: 2.74 SS G_CDS: -2.62 Total: 0.12 kcal Atomic # 6 Polarization: -18.16 SS G_CDS: -2.65 Total: -20.81 kcal Atomic # 7 Polarization: -23.06 SS G_CDS: 0.60 Total: -22.46 kcal Atomic # 8 Polarization: -6.77 SS G_CDS: -0.22 Total: -6.99 kcal Atomic # 14 Polarization: 20.33 SS G_CDS: -5.02 Total: 15.30 kcal Atomic # 17 Polarization: -1.73 SS G_CDS: -1.50 Total: -3.23 kcal Total LS contribution 3.81 Total: 3.81 kcal Total: -26.66 -7.60 -34.26 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260400054.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.247 kcal (2) G-P(sol) polarization free energy of solvation -26.657 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.013 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds