Wall clock time and date at job start Mon Mar 30 2020 05:39:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 H 1.09002 * 110.66503 * 2 1 4 4 O 1.43769 * 110.74858 * 123.21141 * 2 1 3 5 5 C 1.36160 * 109.22583 * 146.26636 * 4 2 1 6 6 C 1.38878 * 111.23775 * 340.94379 * 5 4 2 7 7 C 1.37725 * 120.79408 * 180.66786 * 6 5 4 8 8 C 1.38378 * 120.00522 * 359.60796 * 7 6 5 9 9 C 1.38253 * 119.77210 * 359.97438 * 8 7 6 10 10 C 1.38064 * 120.33639 * 0.19857 * 9 8 7 11 11 Cl 1.73602 * 119.89163 * 180.02562 * 10 9 8 12 12 C 1.52141 * 107.07105 * 1.09417 * 6 5 4 13 13 H 1.08997 * 111.09604 * 133.48254 * 12 6 5 14 14 C 1.50703 * 110.99141 * 257.31549 * 12 6 5 15 15 H 1.07998 * 120.00634 * 48.97382 * 14 12 6 16 16 C 1.37887 * 119.99814 * 228.96899 * 14 12 6 17 17 N 1.31505 * 119.99882 * 173.93445 * 16 14 12 18 18 Si 1.86801 * 119.99796 * 353.94004 * 16 14 12 19 19 H 1.48493 * 109.47081 * 84.82704 * 18 16 14 20 20 H 1.48503 * 109.46707 * 204.82516 * 18 16 14 21 21 H 1.48499 * 109.47273 * 324.82525 * 18 16 14 22 22 H 1.09006 * 109.47059 * 303.02906 * 1 2 3 23 23 H 1.08999 * 109.46861 * 63.02907 * 1 2 3 24 24 H 1.08994 * 109.46820 * 183.03064 * 1 2 3 25 25 H 1.08006 * 120.00121 * 179.58658 * 7 6 5 26 26 H 1.07995 * 120.12001 * 179.97438 * 8 7 6 27 27 H 1.07996 * 119.83074 * 180.18298 * 9 8 7 28 28 H 0.96998 * 119.99990 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.9147 1.0199 0.0000 4 8 2.0394 -0.7364 1.1248 5 6 3.1981 -1.3559 0.7677 6 6 3.3108 -1.4549 -0.6130 7 6 4.4043 -2.0620 -1.1895 8 6 5.4115 -2.5754 -0.3915 9 6 5.3156 -2.4757 0.9841 10 6 4.2187 -1.8707 1.5646 11 17 4.1104 -1.7512 3.2931 12 6 2.0782 -0.7925 -1.2103 13 1 2.3495 -0.1212 -2.0250 14 6 1.0823 -1.8241 -1.6741 15 1 0.7980 -2.6337 -1.0182 16 6 0.5338 -1.7343 -2.9360 17 7 -0.2420 -2.6962 -3.3857 18 14 0.8929 -0.2464 -4.0068 19 1 2.1736 -0.4539 -4.7292 20 1 -0.2061 -0.0668 -4.9892 21 1 0.9966 0.9643 -3.1532 22 1 -0.3633 0.5602 0.8616 23 1 -0.3633 0.4661 -0.9159 24 1 -0.3633 -1.0262 0.0543 25 1 4.4756 -2.1379 -2.2645 26 1 6.2696 -3.0522 -0.8415 27 1 6.1025 -2.8733 1.6078 28 1 -0.6276 -2.6333 -4.2735 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260400056.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:53 Heat of formation + Delta-G solvation = -19.156252 kcal Electronic energy + Delta-G solvation = -14808.663445 eV Core-core repulsion = 12236.673212 eV Total energy + Delta-G solvation = -2571.990233 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -40.48464 -37.14329 -35.90967 -33.69464 -31.58909 -30.38337 -29.38132 -26.74092 -24.31362 -22.00893 -21.08658 -20.05714 -17.55944 -16.64494 -15.98630 -15.53596 -14.62524 -14.32965 -13.97381 -13.41045 -13.03327 -12.80969 -12.32916 -12.10032 -11.84349 -11.47251 -11.08902 -11.02389 -10.86577 -10.76248 -10.60417 -10.10323 -10.05759 -9.86219 -9.48805 -8.75787 -8.16792 -7.49999 -6.29124 -4.28869 1.67877 1.81635 2.58459 3.12430 3.20547 3.22925 3.85652 4.13812 4.20848 4.92489 5.25988 5.36676 5.59501 5.67180 5.74101 5.79333 5.95198 6.10659 6.37566 6.47906 6.52900 6.60942 6.74262 6.80845 7.04953 7.12460 7.18466 7.42755 7.77471 8.28740 8.77460 9.29942 10.82783 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.032497 B = 0.008979 C = 0.007815 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 861.401794 B = 3117.718480 C = 3582.211944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C 0.068 3.932 3 H 0.062 0.938 4 O -0.294 6.294 5 C 0.114 3.886 6 C -0.119 4.119 7 C -0.072 4.072 8 C -0.145 4.145 9 C -0.100 4.100 10 C -0.062 4.062 11 Cl -0.085 7.085 12 C 0.027 3.973 13 H 0.062 0.938 14 C -0.497 4.497 15 H 0.080 0.920 16 C 0.079 3.921 17 N -0.885 5.885 18 Si 0.871 3.129 19 H -0.273 1.273 20 H -0.285 1.285 21 H -0.265 1.265 22 H 0.039 0.961 23 H 0.069 0.931 24 H 0.082 0.918 25 H 0.125 0.875 26 H 0.127 0.873 27 H 0.130 0.870 28 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.268 3.829 5.337 10.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.012 3.988 3 H 0.079 0.921 4 O -0.208 6.208 5 C 0.067 3.933 6 C -0.120 4.120 7 C -0.090 4.090 8 C -0.163 4.163 9 C -0.119 4.119 10 C -0.089 4.089 11 Cl -0.057 7.057 12 C 0.008 3.992 13 H 0.080 0.920 14 C -0.534 4.534 15 H 0.098 0.902 16 C -0.125 4.125 17 N -0.520 5.520 18 Si 0.698 3.302 19 H -0.198 1.198 20 H -0.210 1.210 21 H -0.189 1.189 22 H 0.058 0.942 23 H 0.088 0.912 24 H 0.101 0.899 25 H 0.143 0.857 26 H 0.145 0.855 27 H 0.148 0.852 28 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 7.973 3.778 5.526 10.410 hybrid contribution 0.133 0.653 -0.666 0.942 sum 8.106 4.430 4.860 10.438 Atomic orbital electron populations 1.21621 0.92026 1.04051 1.00190 1.23759 0.96387 0.93387 0.85238 0.92061 1.86828 1.33159 1.62132 1.38671 1.19242 0.87027 0.94627 0.92430 1.21597 0.96520 1.01046 0.92879 1.20403 0.92210 0.96135 1.00252 1.20864 0.99982 1.02975 0.92513 1.20544 0.96205 0.99955 0.95187 1.20040 0.96111 1.09569 0.83210 1.98314 1.98319 1.97356 1.11697 1.19675 0.90234 0.95090 0.94172 0.91990 1.20568 1.21988 1.10472 1.00392 0.90224 1.25061 0.94551 0.95755 0.97085 1.69877 1.32068 1.31719 1.18375 0.86947 0.78566 0.83953 0.80752 1.19836 1.21046 1.18942 0.94221 0.91227 0.89915 0.85704 0.85487 0.85214 0.92172 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.41 8.78 37.16 0.33 -2.08 15 2 C 0.07 1.41 4.15 -25.83 -0.11 1.31 15 3 H 0.06 1.14 8.14 -51.93 -0.42 0.72 15 4 O -0.29 -6.40 10.80 -20.25 -0.22 -6.62 15 5 C 0.11 2.38 6.83 -38.93 -0.27 2.12 15 6 C -0.12 -2.53 5.63 -103.86 -0.58 -3.11 15 7 C -0.07 -1.33 10.03 -39.72 -0.40 -1.73 15 8 C -0.14 -2.27 10.07 -39.52 -0.40 -2.66 15 9 C -0.10 -1.58 9.79 -39.64 -0.39 -1.97 15 10 C -0.06 -1.14 6.34 -39.23 -0.25 -1.39 15 11 Cl -0.09 -1.42 28.94 -51.86 -1.50 -2.92 15 12 C 0.03 0.62 2.87 -91.31 -0.26 0.36 15 13 H 0.06 1.36 5.07 -51.93 -0.26 1.10 15 14 C -0.50 -13.00 6.88 -34.44 -0.24 -13.24 15 15 H 0.08 2.36 7.99 -52.49 -0.42 1.94 15 16 C 0.08 2.11 5.47 -17.82 -0.10 2.01 15 17 N -0.88 -25.23 13.96 55.43 0.77 -24.46 15 18 Si 0.87 19.66 26.91 -169.99 -4.57 15.09 15 19 H -0.27 -6.06 7.11 56.52 0.40 -5.65 15 20 H -0.28 -6.44 7.11 56.52 0.40 -6.04 15 21 H -0.26 -5.64 6.89 56.52 0.39 -5.25 15 22 H 0.04 0.67 8.14 -51.93 -0.42 0.25 15 23 H 0.07 1.35 8.14 -51.93 -0.42 0.93 15 24 H 0.08 1.82 7.00 -51.93 -0.36 1.46 15 25 H 0.12 2.17 8.06 -52.48 -0.42 1.75 15 26 H 0.13 1.55 8.06 -52.49 -0.42 1.13 15 27 H 0.13 1.66 8.06 -52.49 -0.42 1.24 15 28 H 0.27 7.17 8.31 -40.82 -0.34 6.83 15 LS Contribution 255.50 15.07 3.85 3.85 Total: -1.00 -28.00 255.50 -7.06 -35.06 By element: Atomic # 1 Polarization: 3.13 SS G_CDS: -2.73 Total: 0.40 kcal Atomic # 6 Polarization: -17.74 SS G_CDS: -2.66 Total: -20.40 kcal Atomic # 7 Polarization: -25.23 SS G_CDS: 0.77 Total: -24.46 kcal Atomic # 8 Polarization: -6.40 SS G_CDS: -0.22 Total: -6.62 kcal Atomic # 14 Polarization: 19.66 SS G_CDS: -4.57 Total: 15.09 kcal Atomic # 17 Polarization: -1.42 SS G_CDS: -1.50 Total: -2.92 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -28.00 -7.06 -35.06 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260400056.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.901 kcal (2) G-P(sol) polarization free energy of solvation -27.997 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.096 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.060 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds