Wall clock time and date at job start Mon Mar 30 2020 05:39:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08995 * 110.80649 * 2 1 4 4 O 1.43774 * 110.74522 * 236.68746 * 2 1 3 5 5 C 1.36165 * 109.23001 * 269.42310 * 4 2 1 6 6 C 1.38871 * 111.23201 * 340.96767 * 5 4 2 7 7 C 1.37732 * 120.79579 * 180.64428 * 6 5 4 8 8 C 1.38381 * 119.99795 * 359.61469 * 7 6 5 9 9 C 1.38244 * 119.77695 * 359.97438 * 8 7 6 10 10 C 1.38062 * 120.33498 * 0.19788 * 9 8 7 11 11 Cl 1.73603 * 119.89083 * 180.02562 * 10 9 8 12 12 C 1.51646 * 107.04672 * 1.09010 * 6 5 4 13 13 H 1.08991 * 110.94102 * 133.53422 * 12 6 5 14 14 C 1.50704 * 110.93848 * 257.21924 * 12 6 5 15 15 H 1.07999 * 120.00277 * 118.54386 * 14 12 6 16 16 C 1.37882 * 119.99820 * 298.54027 * 14 12 6 17 17 N 1.31510 * 119.99899 * 0.02562 * 16 14 12 18 18 Si 1.86800 * 120.00015 * 180.02562 * 16 14 12 19 19 H 1.48500 * 109.46949 * 359.97438 * 18 16 14 20 20 H 1.48491 * 109.47172 * 120.00176 * 18 16 14 21 21 H 1.48501 * 109.47104 * 240.00278 * 18 16 14 22 22 H 1.08997 * 109.47383 * 181.86355 * 1 2 3 23 23 H 1.09000 * 109.46997 * 301.85828 * 1 2 3 24 24 H 1.09000 * 109.47696 * 61.85823 * 1 2 3 25 25 H 1.08000 * 120.00151 * 179.63703 * 7 6 5 26 26 H 1.08004 * 120.10841 * 180.02562 * 8 7 6 27 27 H 1.07995 * 119.83148 * 180.19178 * 9 8 7 28 28 H 0.97002 * 120.00049 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9172 1.0189 0.0000 4 8 2.0393 -0.7384 -1.1236 5 6 2.2102 -2.0406 -0.7642 6 6 2.2627 -2.1785 0.6167 7 6 2.4445 -3.4150 1.1955 8 6 2.5695 -4.5399 0.3993 9 6 2.5106 -4.4174 -0.9764 10 6 2.3320 -3.1786 -1.5591 11 17 2.2591 -3.0381 -3.2879 12 6 2.0781 -0.7947 1.2089 13 1 1.3542 -0.8130 2.0235 14 6 3.3948 -0.2278 1.6737 15 1 3.7773 0.6809 1.2328 16 6 4.1111 -0.8692 2.6620 17 7 3.6455 -1.9759 3.1986 18 14 5.7429 -0.1661 3.2386 19 1 6.0417 1.0761 2.4818 20 1 5.6634 0.1440 4.6886 21 1 6.8209 -1.1600 3.0033 22 1 -0.3634 -1.0271 0.0334 23 1 -0.3633 0.5424 0.8729 24 1 -0.3634 0.4847 -0.9061 25 1 2.4891 -3.5066 2.2706 26 1 2.7117 -5.5105 0.8513 27 1 2.6049 -5.2951 -1.5985 28 1 4.1496 -2.4273 3.8936 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260400058.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:39:55 Heat of formation + Delta-G solvation = -20.862326 kcal Electronic energy + Delta-G solvation = -14949.656487 eV Core-core repulsion = 12377.592274 eV Total energy + Delta-G solvation = -2572.064213 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -40.28619 -36.83100 -35.64910 -33.57377 -31.37115 -29.83801 -29.02481 -27.09115 -23.82506 -21.84718 -20.89962 -20.30836 -16.88818 -16.18730 -15.77302 -15.09174 -14.77304 -14.57924 -13.49937 -13.00031 -12.85124 -12.56053 -12.26747 -11.94541 -11.63376 -11.34805 -11.16883 -10.89445 -10.79262 -10.54675 -10.37262 -10.26555 -10.05812 -9.50336 -9.44353 -8.66172 -7.73598 -7.23957 -6.20443 -4.29985 2.11542 2.17814 2.84623 3.20183 3.28815 3.32655 4.09364 4.26989 4.58563 5.09216 5.51258 5.65576 5.73916 5.80208 5.85100 6.09651 6.15380 6.26569 6.35883 6.51269 6.62947 6.87750 6.96124 7.23392 7.29873 7.52921 7.71273 7.76154 7.99830 8.07067 8.70621 9.35493 10.82469 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.025635 B = 0.009842 C = 0.008626 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1092.004097 B = 2844.400663 C = 3245.181936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.071 3.929 3 H 0.106 0.894 4 O -0.298 6.298 5 C 0.100 3.900 6 C -0.092 4.092 7 C -0.046 4.046 8 C -0.159 4.159 9 C -0.108 4.108 10 C -0.070 4.070 11 Cl -0.098 7.098 12 C 0.061 3.939 13 H 0.054 0.946 14 C -0.510 4.510 15 H 0.066 0.934 16 C 0.067 3.933 17 N -0.881 5.881 18 Si 0.899 3.101 19 H -0.272 1.272 20 H -0.282 1.282 21 H -0.282 1.282 22 H 0.055 0.945 23 H 0.069 0.931 24 H 0.054 0.946 25 H 0.156 0.844 26 H 0.119 0.881 27 H 0.122 0.878 28 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.965 -2.289 -4.443 6.379 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C 0.015 3.985 3 H 0.124 0.876 4 O -0.213 6.213 5 C 0.054 3.946 6 C -0.094 4.094 7 C -0.064 4.064 8 C -0.178 4.178 9 C -0.127 4.127 10 C -0.097 4.097 11 Cl -0.069 7.069 12 C 0.043 3.957 13 H 0.072 0.928 14 C -0.548 4.548 15 H 0.084 0.916 16 C -0.136 4.136 17 N -0.518 5.518 18 Si 0.726 3.274 19 H -0.196 1.196 20 H -0.208 1.208 21 H -0.208 1.208 22 H 0.074 0.926 23 H 0.088 0.912 24 H 0.073 0.927 25 H 0.173 0.827 26 H 0.137 0.863 27 H 0.140 0.860 28 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -3.891 -2.270 -4.664 6.484 hybrid contribution 1.058 0.219 0.257 1.110 sum -2.833 -2.050 -4.407 5.626 Atomic orbital electron populations 1.22212 0.96049 1.02258 1.01723 1.23631 0.92583 0.96794 0.85461 0.87616 1.86804 1.79886 1.16028 1.38532 1.19350 0.97706 0.84618 0.92974 1.21341 0.99471 0.97268 0.91301 1.21125 0.93228 0.89732 1.02355 1.21006 1.05403 0.98922 0.92425 1.20467 1.02687 0.94276 0.95259 1.19933 1.15006 0.92435 0.82370 1.98287 1.97456 1.98461 1.12731 1.19132 0.97651 0.86440 0.92472 0.92822 1.21046 1.04390 1.09615 1.19705 0.91628 1.24953 0.98109 0.94685 0.95810 1.69802 1.38610 1.17090 1.26336 0.86407 0.83215 0.79272 0.78458 1.19601 1.20765 1.20823 0.92581 0.91174 0.92679 0.82695 0.86257 0.85973 0.92633 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.81 9.49 37.16 0.35 -2.45 15 2 C 0.07 1.47 3.85 -25.83 -0.10 1.37 15 3 H 0.11 2.09 7.77 -51.93 -0.40 1.69 15 4 O -0.30 -6.74 10.81 -20.26 -0.22 -6.96 15 5 C 0.10 2.26 6.74 -38.94 -0.26 2.00 15 6 C -0.09 -2.17 5.24 -104.11 -0.55 -2.72 15 7 C -0.05 -1.02 8.93 -39.71 -0.35 -1.38 15 8 C -0.16 -3.03 10.07 -39.53 -0.40 -3.43 15 9 C -0.11 -2.01 9.79 -39.64 -0.39 -2.39 15 10 C -0.07 -1.45 6.34 -39.23 -0.25 -1.69 15 11 Cl -0.10 -1.78 28.94 -51.86 -1.50 -3.28 15 12 C 0.06 1.46 2.60 -91.56 -0.24 1.22 15 13 H 0.05 1.31 7.92 -51.93 -0.41 0.90 15 14 C -0.51 -13.31 8.61 -34.44 -0.30 -13.61 15 15 H 0.07 1.71 7.60 -52.49 -0.40 1.31 15 16 C 0.07 1.75 5.33 -17.82 -0.10 1.65 15 17 N -0.88 -22.97 9.89 55.43 0.55 -22.42 15 18 Si 0.90 20.47 29.54 -169.99 -5.02 15.45 15 19 H -0.27 -6.17 7.11 56.52 0.40 -5.76 15 20 H -0.28 -6.31 7.11 56.52 0.40 -5.91 15 21 H -0.28 -6.50 7.11 56.52 0.40 -6.10 15 22 H 0.06 0.98 8.12 -51.93 -0.42 0.56 15 23 H 0.07 1.06 8.14 -51.93 -0.42 0.64 15 24 H 0.05 0.84 8.14 -51.93 -0.42 0.42 15 25 H 0.16 3.61 6.12 -52.49 -0.32 3.28 15 26 H 0.12 1.90 8.06 -52.48 -0.42 1.48 15 27 H 0.12 1.90 8.06 -52.49 -0.42 1.48 15 28 H 0.26 6.56 8.31 -40.82 -0.34 6.22 15 LS Contribution 255.72 15.07 3.85 3.85 Total: -1.00 -26.88 255.72 -7.70 -34.58 By element: Atomic # 1 Polarization: 2.98 SS G_CDS: -2.78 Total: 0.20 kcal Atomic # 6 Polarization: -18.85 SS G_CDS: -2.57 Total: -21.43 kcal Atomic # 7 Polarization: -22.97 SS G_CDS: 0.55 Total: -22.42 kcal Atomic # 8 Polarization: -6.74 SS G_CDS: -0.22 Total: -6.96 kcal Atomic # 14 Polarization: 20.47 SS G_CDS: -5.02 Total: 15.45 kcal Atomic # 17 Polarization: -1.78 SS G_CDS: -1.50 Total: -3.28 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -26.88 -7.70 -34.58 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260400058.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.718 kcal (2) G-P(sol) polarization free energy of solvation -26.885 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.580 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds