Wall clock time and date at job start Mon Mar 30 2020 05:40:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09008 * 109.47085 * 2 1 4 4 Cl 1.80299 * 109.47131 * 240.00074 * 2 1 3 5 5 C 1.50702 * 109.47333 * 119.99669 * 2 1 3 6 6 O 1.21309 * 119.99527 * 94.99725 * 5 2 1 7 7 C 1.46861 * 120.00034 * 275.00498 * 5 2 1 8 8 C 1.40317 * 119.91867 * 179.97438 * 7 5 2 9 9 C 1.36214 * 120.07496 * 179.97438 * 8 7 5 10 10 C 1.40956 * 119.92267 * 0.02562 * 9 8 7 11 11 C 1.40996 * 120.07791 * 179.97438 * 10 9 8 12 12 H 1.07997 * 119.99719 * 24.80138 * 11 10 9 13 13 C 1.40332 * 119.99975 * 204.79936 * 11 10 9 14 14 N 1.30581 * 120.00067 * 18.03255 * 13 11 10 15 15 Si 1.86800 * 119.99936 * 198.03337 * 13 11 10 16 16 H 1.48504 * 109.47046 * 0.02562 * 15 13 11 17 17 H 1.48498 * 109.46868 * 119.99824 * 15 13 11 18 18 H 1.48491 * 109.47099 * 239.99931 * 15 13 11 19 19 C 1.40966 * 119.84554 * 0.25044 * 10 9 8 20 20 C 1.36203 * 119.91977 * 359.48487 * 19 10 9 21 21 H 1.08995 * 109.47471 * 299.99676 * 1 2 3 22 22 H 1.09000 * 109.47165 * 60.00243 * 1 2 3 23 23 H 1.09008 * 109.47085 * 179.97438 * 1 2 3 24 24 H 1.07999 * 119.96521 * 0.02562 * 8 7 5 25 25 H 1.07996 * 120.03535 * 179.97438 * 9 8 7 26 26 H 0.97006 * 120.00215 * 179.97438 * 14 13 11 27 27 H 1.08005 * 120.03754 * 179.73099 * 19 10 9 28 28 H 1.08001 * 119.96210 * 180.25745 * 20 19 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 17 2.1310 -0.8499 -1.4721 5 6 2.0324 -0.7103 1.2305 6 8 2.3208 -1.8874 1.1760 7 6 2.1725 0.0223 2.4955 8 6 2.6400 -0.6409 3.6403 9 6 2.7717 0.0357 4.8152 10 6 2.4374 1.4035 4.8802 11 6 2.5719 2.1069 6.0947 12 1 3.2717 1.7641 6.8425 13 6 1.7967 3.2524 6.3318 14 7 0.7243 3.4737 5.6204 15 14 2.2987 4.4604 7.6652 16 1 3.5425 3.9840 8.3220 17 1 2.5394 5.7946 7.0592 18 1 1.2139 4.5633 8.6739 19 6 1.9625 2.0651 3.7295 20 6 1.8384 1.3837 2.5567 21 1 -0.3634 0.5137 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 2.8964 -1.6888 3.5897 25 1 3.1311 -0.4755 5.6960 26 1 0.1882 4.2653 5.7845 27 1 1.7013 3.1120 3.7769 28 1 1.4786 1.8910 1.6737 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000306537700.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:40:40 Heat of formation + Delta-G solvation = -46.216245 kcal Electronic energy + Delta-G solvation = -14120.603019 eV Core-core repulsion = 11547.439377 eV Total energy + Delta-G solvation = -2573.163642 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -38.94300 -37.13383 -35.61282 -34.04430 -32.42593 -30.10604 -29.56777 -26.36250 -24.14675 -21.68559 -20.98716 -18.84458 -17.67002 -16.32762 -15.57874 -15.06671 -14.32509 -14.11945 -13.94471 -13.25211 -12.92534 -12.33756 -12.25704 -12.15488 -11.98920 -11.61333 -11.37842 -11.33262 -11.04885 -10.74519 -10.49886 -10.19764 -10.13276 -9.67972 -9.45729 -8.74206 -7.85020 -7.68660 -7.19368 -4.74737 1.80559 2.42437 2.77870 2.87002 2.92588 2.95303 3.43789 3.63425 4.34535 4.59931 5.10550 5.20466 5.44959 5.71977 5.82425 5.95286 6.19417 6.19613 6.29342 6.64911 6.69581 6.91208 7.01363 7.31840 7.59145 7.70182 7.74478 7.93219 8.26017 8.44199 8.47723 8.61880 9.71343 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.050229 B = 0.005592 C = 0.005238 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 557.316738 B = 5006.214159 C = 5343.830369 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.044 4.044 3 H 0.118 0.882 4 Cl -0.175 7.175 5 C 0.395 3.605 6 O -0.485 6.485 7 C -0.313 4.313 8 C -0.018 4.018 9 C -0.241 4.241 10 C 0.131 3.869 11 C -0.431 4.431 12 H 0.088 0.912 13 C 0.073 3.927 14 N -0.762 5.762 15 Si 0.915 3.085 16 H -0.256 1.256 17 H -0.267 1.267 18 H -0.270 1.270 19 C -0.181 4.181 20 C -0.056 4.056 21 H 0.084 0.916 22 H 0.070 0.930 23 H 0.068 0.932 24 H 0.100 0.900 25 H 0.099 0.901 26 H 0.289 0.711 27 H 0.121 0.879 28 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.135 1.748 -4.116 4.613 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.089 4.089 3 H 0.136 0.864 4 Cl -0.149 7.149 5 C 0.279 3.721 6 O -0.365 6.365 7 C -0.315 4.315 8 C -0.036 4.036 9 C -0.260 4.260 10 C 0.127 3.873 11 C -0.458 4.458 12 H 0.106 0.894 13 C -0.150 4.150 14 N -0.384 5.384 15 Si 0.738 3.262 16 H -0.179 1.179 17 H -0.192 1.192 18 H -0.195 1.195 19 C -0.200 4.200 20 C -0.075 4.075 21 H 0.102 0.898 22 H 0.089 0.911 23 H 0.087 0.913 24 H 0.119 0.881 25 H 0.117 0.883 26 H 0.100 0.900 27 H 0.139 0.861 28 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.161 1.248 -4.287 4.614 hybrid contribution 0.040 0.731 0.463 0.866 sum -1.121 1.979 -3.824 4.450 Atomic orbital electron populations 1.21978 0.91047 1.03818 1.03681 1.24698 0.98414 0.99603 0.86174 0.86401 1.98696 1.90262 1.82116 1.43812 1.21985 0.74205 0.87923 0.88002 1.90454 1.42173 1.17403 1.86500 1.19220 1.22585 0.95567 0.94165 1.20489 0.93466 0.97775 0.91890 1.20721 1.13604 0.94693 0.96999 1.17852 0.86165 0.90516 0.92752 1.20000 1.17822 1.06492 1.01481 0.89379 1.26182 0.93306 0.98068 0.97437 1.69714 1.09405 1.24801 1.34491 0.86125 0.80247 0.79690 0.80111 1.17911 1.19202 1.19496 1.21000 1.07116 1.00215 0.91660 1.20637 0.96933 0.92862 0.97046 0.89762 0.91053 0.91296 0.88144 0.88291 0.89954 0.86110 0.88760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.06 9.30 37.16 0.35 -1.72 15 2 C -0.04 -0.73 3.02 -27.88 -0.08 -0.81 15 3 H 0.12 1.74 6.72 -51.92 -0.35 1.39 15 4 Cl -0.18 -2.90 28.00 -51.86 -1.45 -4.35 15 5 C 0.40 8.04 6.26 -30.82 -0.19 7.84 15 6 O -0.48 -11.05 16.24 5.53 0.09 -10.96 15 7 C -0.31 -6.84 5.89 -104.85 -0.62 -7.46 15 8 C -0.02 -0.40 9.53 -39.53 -0.38 -0.78 15 9 C -0.24 -5.62 9.73 -39.28 -0.38 -6.00 15 10 C 0.13 3.19 5.58 -106.79 -0.60 2.59 15 11 C -0.43 -10.25 9.04 -37.75 -0.34 -10.59 15 12 H 0.09 2.00 7.91 -52.49 -0.42 1.58 15 13 C 0.07 1.61 5.13 -17.30 -0.09 1.52 15 14 N -0.76 -17.31 10.95 55.57 0.61 -16.71 15 15 Si 0.92 16.40 29.60 -169.99 -5.03 11.36 15 16 H -0.26 -4.58 7.11 56.52 0.40 -4.17 15 17 H -0.27 -4.71 7.11 56.52 0.40 -4.31 15 18 H -0.27 -4.78 7.11 56.52 0.40 -4.38 15 19 C -0.18 -4.23 8.63 -39.28 -0.34 -4.57 15 20 C -0.06 -1.18 9.27 -39.53 -0.37 -1.55 15 21 H 0.08 1.18 8.12 -51.93 -0.42 0.76 15 22 H 0.07 0.82 8.14 -51.93 -0.42 0.40 15 23 H 0.07 0.99 8.14 -51.92 -0.42 0.56 15 24 H 0.10 2.20 7.63 -52.49 -0.40 1.80 15 25 H 0.10 2.15 8.06 -52.49 -0.42 1.73 15 26 H 0.29 5.85 8.29 -40.82 -0.34 5.51 15 27 H 0.12 2.86 6.15 -52.48 -0.32 2.53 15 28 H 0.09 1.69 6.44 -52.49 -0.34 1.35 15 LS Contribution 263.08 15.07 3.96 3.96 Total: -1.00 -25.93 263.08 -7.51 -33.44 By element: Atomic # 1 Polarization: 7.41 SS G_CDS: -2.65 Total: 4.76 kcal Atomic # 6 Polarization: -18.47 SS G_CDS: -3.04 Total: -21.51 kcal Atomic # 7 Polarization: -17.31 SS G_CDS: 0.61 Total: -16.71 kcal Atomic # 8 Polarization: -11.05 SS G_CDS: 0.09 Total: -10.96 kcal Atomic # 14 Polarization: 16.40 SS G_CDS: -5.03 Total: 11.36 kcal Atomic # 17 Polarization: -2.90 SS G_CDS: -1.45 Total: -4.35 kcal Total LS contribution 3.96 Total: 3.96 kcal Total: -25.93 -7.51 -33.44 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000306537700.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.779 kcal (2) G-P(sol) polarization free energy of solvation -25.929 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.708 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.508 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.437 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.216 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds