Wall clock time and date at job start Mon Mar 30 2020 05:37:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.50703 * 109.46710 * 2 1 4 4 O 1.21337 * 120.00225 * 359.97438 * 3 2 1 5 5 C 1.46574 * 119.99925 * 180.02562 * 3 2 1 6 6 C 1.39667 * 120.58434 * 354.56987 * 5 3 2 7 7 C 1.38065 * 120.06143 * 180.26129 * 6 5 3 8 8 C 1.38641 * 121.33061 * 359.77693 * 7 6 5 9 9 C 1.37699 * 121.21428 * 359.95571 * 8 7 6 10 10 Cl 1.73594 * 120.08868 * 179.97438 * 9 8 7 11 11 C 1.40987 * 119.82055 * 0.02562 * 9 8 7 12 12 C 1.40629 * 120.62649 * 179.97438 * 11 9 8 13 13 H 1.07997 * 119.99867 * 134.50409 * 12 11 9 14 14 C 1.40410 * 120.00265 * 314.49585 * 12 11 9 15 15 N 1.30558 * 120.00125 * 338.07067 * 14 12 11 16 16 Si 1.86803 * 119.99829 * 157.78314 * 14 12 11 17 17 H 1.48501 * 109.46710 * 180.28173 * 16 14 12 18 18 H 1.48503 * 109.47295 * 300.28105 * 16 14 12 19 19 H 1.48502 * 109.46957 * 60.28288 * 16 14 12 20 20 H 1.09000 * 109.47109 * 299.99858 * 1 2 3 21 21 H 1.08991 * 109.47671 * 60.00425 * 1 2 3 22 22 H 1.09007 * 109.46650 * 180.02562 * 1 2 3 23 23 H 1.08991 * 109.47336 * 239.99916 * 2 1 3 24 24 H 1.08998 * 109.47078 * 119.99295 * 2 1 3 25 25 H 1.08004 * 119.97139 * 0.02562 * 6 5 3 26 26 H 1.07994 * 119.33517 * 179.75663 * 7 6 5 27 27 H 1.08003 * 119.38800 * 179.97438 * 8 7 6 28 28 H 0.97000 * 119.99601 * 354.33059 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0322 1.4209 0.0000 4 8 1.2437 2.3431 -0.0005 5 6 3.4733 1.6888 -0.0006 6 6 4.3908 0.6419 0.1127 7 6 5.7457 0.9071 0.1164 8 6 6.2271 2.2024 0.0046 9 6 5.3708 3.2741 -0.1153 10 17 6.0053 4.8840 -0.2527 11 6 3.9772 3.0603 -0.1251 12 6 3.0873 4.1424 -0.2462 13 1 2.2524 4.0812 -0.9285 14 6 3.2840 5.3024 0.5201 15 7 3.9874 5.2476 1.6187 16 14 2.5461 6.9258 -0.0365 17 1 2.9022 7.9904 0.9356 18 1 3.0812 7.2794 -1.3759 19 1 1.0685 6.7980 -0.1116 20 1 -0.3633 0.5138 0.8900 21 1 -0.3634 0.5137 -0.8899 22 1 -0.3633 -1.0278 0.0005 23 1 1.8934 -0.5138 -0.8899 24 1 1.8933 -0.5137 0.8900 25 1 4.0400 -0.3758 0.2013 26 1 6.4447 0.0890 0.2085 27 1 7.2934 2.3740 0.0114 28 1 4.3046 4.3926 1.9493 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000306878072.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:37:11 Heat of formation + Delta-G solvation = -42.254704 kcal Electronic energy + Delta-G solvation = -14682.495935 eV Core-core repulsion = 12109.504078 eV Total energy + Delta-G solvation = -2572.991857 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -38.68584 -36.94923 -34.99535 -33.98639 -32.23873 -29.96562 -29.47236 -25.67240 -24.10195 -21.86203 -20.94456 -18.52873 -18.01775 -15.86753 -14.90845 -14.73319 -14.66030 -14.06204 -13.69969 -13.40243 -12.92926 -12.55246 -12.05152 -11.77211 -11.52176 -11.35527 -11.30760 -10.92135 -10.69837 -10.49495 -10.39113 -10.23231 -9.81642 -9.72217 -8.75691 -8.41613 -7.75255 -7.55460 -7.15945 -4.60337 1.84082 2.57521 3.18506 3.24948 3.37869 3.54164 3.55920 4.01968 4.52368 5.01459 5.12490 5.51473 5.56192 5.77713 5.82963 6.10573 6.11552 6.16645 6.33271 6.52679 6.61398 6.69255 7.04692 7.22252 7.39119 7.51072 7.65913 7.86411 8.00751 8.46693 8.63929 8.84839 9.96990 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.021441 B = 0.012228 C = 0.008182 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1305.618468 B = 2289.208100 C = 3421.302571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.167 4.167 3 C 0.386 3.614 4 O -0.464 6.464 5 C -0.281 4.281 6 C -0.031 4.031 7 C -0.256 4.256 8 C -0.056 4.056 9 C -0.120 4.120 10 Cl -0.092 7.092 11 C 0.116 3.884 12 C -0.449 4.449 13 H 0.095 0.905 14 C 0.042 3.958 15 N -0.760 5.760 16 Si 1.061 2.939 17 H -0.272 1.272 18 H -0.271 1.271 19 H -0.273 1.273 20 H 0.056 0.944 21 H 0.056 0.944 22 H 0.049 0.951 23 H 0.084 0.916 24 H 0.083 0.917 25 H 0.103 0.897 26 H 0.101 0.899 27 H 0.102 0.898 28 H 0.295 0.705 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.204 -5.114 -1.908 5.462 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.205 4.205 3 C 0.268 3.732 4 O -0.343 6.343 5 C -0.283 4.283 6 C -0.049 4.049 7 C -0.275 4.275 8 C -0.076 4.076 9 C -0.148 4.148 10 Cl -0.064 7.064 11 C 0.111 3.889 12 C -0.474 4.474 13 H 0.113 0.887 14 C -0.183 4.183 15 N -0.381 5.381 16 Si 0.884 3.116 17 H -0.197 1.197 18 H -0.197 1.197 19 H -0.198 1.198 20 H 0.075 0.925 21 H 0.075 0.925 22 H 0.068 0.932 23 H 0.102 0.898 24 H 0.101 0.899 25 H 0.121 0.879 26 H 0.119 0.881 27 H 0.120 0.880 28 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -0.621 -2.880 -1.488 3.301 hybrid contribution 0.502 -1.834 -0.310 1.926 sum -0.120 -4.714 -1.797 5.046 Atomic orbital electron populations 1.21534 0.94782 1.00422 1.02793 1.21941 0.97188 0.98223 1.03126 1.21771 0.88544 0.89432 0.73417 1.90477 1.58365 1.47066 1.38394 1.21065 0.93211 0.93519 1.20529 1.20991 0.93094 0.96733 0.94106 1.20113 0.94842 0.95063 1.17500 1.20587 0.97667 0.92061 0.97255 1.21103 0.93415 0.84176 1.16073 1.98255 1.86539 1.24875 1.96713 1.18386 0.89696 0.91760 0.89033 1.20733 1.10079 0.97269 1.19340 0.88675 1.27050 0.93988 1.03822 0.93437 1.70298 1.19401 1.32203 1.16163 0.83676 0.76989 0.73758 0.77214 1.19654 1.19665 1.19779 0.92450 0.92473 0.93184 0.89790 0.89874 0.87904 0.88099 0.88007 0.89186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.08 9.20 37.16 0.34 -1.74 15 2 C -0.17 -2.72 5.12 -27.88 -0.14 -2.87 15 3 C 0.39 8.48 7.08 -30.95 -0.22 8.26 15 4 O -0.46 -11.66 13.71 5.51 0.08 -11.59 15 5 C -0.28 -6.54 6.06 -102.61 -0.62 -7.16 15 6 C -0.03 -0.62 9.47 -39.11 -0.37 -0.99 15 7 C -0.26 -5.11 9.98 -39.50 -0.39 -5.50 15 8 C -0.06 -1.21 9.75 -39.63 -0.39 -1.60 15 9 C -0.12 -2.91 5.52 -38.74 -0.21 -3.12 15 10 Cl -0.09 -2.15 25.15 -51.86 -1.30 -3.45 15 11 C 0.12 2.99 4.95 -104.56 -0.52 2.47 15 12 C -0.45 -11.92 6.98 -37.86 -0.26 -12.18 15 13 H 0.10 2.62 6.83 -52.49 -0.36 2.26 15 14 C 0.04 1.07 3.73 -17.28 -0.06 1.00 15 15 N -0.76 -19.99 11.80 55.57 0.66 -19.33 15 16 Si 1.06 22.56 29.99 -169.99 -5.10 17.46 15 17 H -0.27 -5.66 7.11 56.52 0.40 -5.26 15 18 H -0.27 -5.54 7.11 56.52 0.40 -5.14 15 19 H -0.27 -5.62 7.11 56.52 0.40 -5.22 15 20 H 0.06 0.91 8.10 -51.93 -0.42 0.49 15 21 H 0.06 0.90 8.10 -51.93 -0.42 0.48 15 22 H 0.05 0.60 8.14 -51.93 -0.42 0.18 15 23 H 0.08 1.22 8.14 -51.93 -0.42 0.80 15 24 H 0.08 1.22 7.94 -51.93 -0.41 0.80 15 25 H 0.10 1.70 7.02 -52.48 -0.37 1.33 15 26 H 0.10 1.72 8.06 -52.49 -0.42 1.29 15 27 H 0.10 1.96 8.06 -52.48 -0.42 1.54 15 28 H 0.30 8.05 7.24 -40.82 -0.30 7.76 15 LS Contribution 257.43 15.07 3.88 3.88 Total: -1.00 -27.73 257.43 -7.41 -35.13 By element: Atomic # 1 Polarization: 4.08 SS G_CDS: -2.76 Total: 1.31 kcal Atomic # 6 Polarization: -20.56 SS G_CDS: -2.85 Total: -23.41 kcal Atomic # 7 Polarization: -19.99 SS G_CDS: 0.66 Total: -19.33 kcal Atomic # 8 Polarization: -11.66 SS G_CDS: 0.08 Total: -11.59 kcal Atomic # 14 Polarization: 22.56 SS G_CDS: -5.10 Total: 17.46 kcal Atomic # 17 Polarization: -2.15 SS G_CDS: -1.30 Total: -3.45 kcal Total LS contribution 3.88 Total: 3.88 kcal Total: -27.73 -7.41 -35.13 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000306878072.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.123 kcal (2) G-P(sol) polarization free energy of solvation -27.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.132 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.255 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds