Wall clock time and date at job start Mon Mar 30 2020 05:41:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 O 1.20757 * 120.00037 * 2 1 4 4 C 1.50704 * 119.99843 * 179.97438 * 2 1 3 5 5 C 1.50699 * 109.46866 * 180.02562 * 4 2 1 6 6 C 1.38679 * 119.79293 * 90.00402 * 5 4 2 7 7 C 1.38550 * 120.52354 * 179.97438 * 6 5 4 8 8 C 1.37853 * 120.10728 * 359.97438 * 7 6 5 9 9 Cl 1.73601 * 120.21093 * 179.97438 * 8 7 6 10 10 C 1.40866 * 119.58311 * 0.02562 * 8 7 6 11 11 C 1.41339 * 120.25620 * 179.97438 * 10 8 7 12 12 H 1.08003 * 119.99591 * 24.78452 * 11 10 8 13 13 C 1.39935 * 119.99898 * 205.05405 * 11 10 8 14 14 N 1.30831 * 120.00522 * 17.59037 * 13 11 10 15 15 Si 1.86804 * 119.99766 * 197.58386 * 13 11 10 16 16 H 1.48502 * 109.46879 * 60.00326 * 15 13 11 17 17 H 1.48499 * 109.47031 * 180.02562 * 15 13 11 18 18 H 1.48497 * 109.47296 * 300.00306 * 15 13 11 19 19 C 1.36580 * 119.79377 * 270.26288 * 5 4 2 20 20 H 1.09004 * 109.47500 * 270.00432 * 1 2 3 21 21 H 1.08999 * 109.46956 * 30.00727 * 1 2 3 22 22 H 1.09000 * 109.47336 * 150.00350 * 1 2 3 23 23 H 1.09002 * 109.46669 * 60.00792 * 4 2 1 24 24 H 1.08997 * 109.47412 * 300.00249 * 4 2 1 25 25 H 1.08004 * 119.73913 * 359.95575 * 6 5 4 26 26 H 1.08003 * 119.94588 * 179.97438 * 7 6 5 27 27 H 0.97001 * 120.00405 * 184.58394 * 14 13 11 28 28 H 1.08005 * 120.05342 * 0.04393 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0458 0.0000 4 6 2.2604 -1.3052 0.0006 5 6 3.7421 -1.0298 0.0011 6 6 4.4191 -0.9037 1.2048 7 6 5.7812 -0.6510 1.2230 8 6 6.4766 -0.5231 0.0396 9 17 8.1833 -0.2059 0.0592 10 6 5.7934 -0.6504 -1.1857 11 6 6.4922 -0.5213 -2.4075 12 1 7.5524 -0.7235 -2.4471 13 6 5.8115 -0.1261 -3.5645 14 7 4.6400 0.4487 -3.4702 15 14 6.5756 -0.4192 -5.2437 16 1 6.7995 -1.8743 -5.4385 17 1 5.6614 0.0871 -6.2987 18 1 7.8736 0.2971 -5.3288 19 6 4.4087 -0.9007 -1.1839 20 1 -0.3634 0.0001 1.0277 21 1 -0.3633 0.8899 -0.5139 22 1 -0.3634 -0.8900 -0.5138 23 1 1.9972 -1.8770 -0.8893 24 1 1.9971 -1.8764 0.8908 25 1 3.8802 -1.0029 2.1355 26 1 6.2991 -0.5541 2.1658 27 1 4.1386 0.6623 -4.2726 28 1 3.8748 -0.9951 -2.1180 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307057645.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:41:03 Heat of formation + Delta-G solvation = -41.008381 kcal Electronic energy + Delta-G solvation = -14368.512990 eV Core-core repulsion = 11795.575178 eV Total energy + Delta-G solvation = -2572.937812 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.05862 -37.45180 -34.98741 -33.85704 -31.80540 -29.89063 -29.60370 -26.17576 -25.22747 -21.23462 -20.38725 -18.92829 -17.18939 -15.58273 -15.23714 -14.96341 -14.82790 -14.57809 -13.79057 -13.43819 -12.66469 -12.27377 -12.12218 -12.01139 -11.92900 -11.48614 -11.33829 -11.14468 -10.86271 -10.55926 -10.16226 -10.04223 -9.80170 -9.25002 -9.22358 -9.02721 -7.50844 -7.26936 -6.79671 -4.40860 2.54087 2.64605 2.84383 3.05807 3.09256 3.18976 3.76036 3.91979 4.41350 4.74194 5.31771 5.48715 5.53494 5.56525 5.81013 5.84539 6.09482 6.25537 6.37025 6.45973 6.96831 7.10014 7.18814 7.40748 7.62230 7.82243 7.96361 8.11273 8.14270 8.49520 8.76410 8.81118 10.12271 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.018749 B = 0.010436 C = 0.007149 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1493.051563 B = 2682.439029 C = 3915.483623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.346 3.654 3 O -0.434 6.434 4 C -0.122 4.122 5 C -0.064 4.064 6 C -0.224 4.224 7 C -0.079 4.079 8 C -0.140 4.140 9 Cl -0.122 7.122 10 C 0.119 3.881 11 C -0.448 4.448 12 H 0.087 0.913 13 C 0.077 3.923 14 N -0.783 5.783 15 Si 0.907 3.093 16 H -0.263 1.263 17 H -0.278 1.278 18 H -0.263 1.263 19 C -0.138 4.138 20 H 0.087 0.913 21 H 0.079 0.921 22 H 0.080 0.920 23 H 0.094 0.906 24 H 0.091 0.909 25 H 0.092 0.908 26 H 0.097 0.903 27 H 0.282 0.718 28 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.986 -3.796 2.542 7.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.259 4.259 2 C 0.219 3.781 3 O -0.306 6.306 4 C -0.159 4.159 5 C -0.065 4.065 6 C -0.244 4.244 7 C -0.098 4.098 8 C -0.167 4.167 9 Cl -0.094 7.094 10 C 0.116 3.884 11 C -0.476 4.476 12 H 0.105 0.895 13 C -0.142 4.142 14 N -0.408 5.408 15 Si 0.731 3.269 16 H -0.187 1.187 17 H -0.203 1.203 18 H -0.188 1.188 19 C -0.157 4.157 20 H 0.106 0.894 21 H 0.097 0.903 22 H 0.099 0.901 23 H 0.113 0.887 24 H 0.109 0.891 25 H 0.110 0.890 26 H 0.116 0.884 27 H 0.093 0.907 28 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -5.672 -3.018 2.386 6.854 hybrid contribution 0.298 -0.088 -0.744 0.806 sum -5.374 -3.106 1.642 6.421 Atomic orbital electron populations 1.22299 0.95592 1.04196 1.03844 1.24560 0.90971 0.90900 0.71622 1.90463 1.71712 1.34829 1.33569 1.21051 0.94529 0.96866 1.03504 1.18815 0.92288 1.01177 0.94189 1.20031 0.93535 1.15152 0.95695 1.20337 0.93954 1.00274 0.95236 1.20770 0.82598 1.18441 0.94909 1.98195 1.17244 1.95041 1.98887 1.17372 0.91709 0.88353 0.90962 1.19635 0.97132 1.38738 0.92126 0.89544 1.25933 0.94835 0.91891 1.01569 1.69859 1.12289 1.26821 1.31828 0.86369 0.80034 0.79996 0.80452 1.18718 1.20323 1.18790 1.20813 0.94362 1.04311 0.96248 0.89402 0.90251 0.90143 0.88735 0.89057 0.88998 0.88436 0.90676 0.86014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.36 10.25 36.00 0.37 -1.99 15 2 C 0.35 5.97 7.26 -29.03 -0.21 5.76 15 3 O -0.43 -9.84 16.77 6.00 0.10 -9.74 15 4 C -0.12 -2.07 5.74 -29.03 -0.17 -2.23 15 5 C -0.06 -1.44 4.33 -105.06 -0.46 -1.89 15 6 C -0.22 -4.98 9.70 -39.30 -0.38 -5.36 15 7 C -0.08 -1.83 9.82 -39.61 -0.39 -2.22 15 8 C -0.14 -3.52 6.38 -38.73 -0.25 -3.77 15 9 Cl -0.12 -2.78 27.60 -51.86 -1.43 -4.21 15 10 C 0.12 3.19 5.57 -106.79 -0.60 2.60 15 11 C -0.45 -11.89 8.53 -37.77 -0.32 -12.21 15 12 H 0.09 2.26 7.12 -52.48 -0.37 1.88 15 13 C 0.08 1.92 5.14 -17.34 -0.09 1.83 15 14 N -0.78 -20.24 10.96 55.55 0.61 -19.63 15 15 Si 0.91 18.70 29.60 -169.99 -5.03 13.67 15 16 H -0.26 -5.32 7.11 56.52 0.40 -4.91 15 17 H -0.28 -5.55 7.11 56.52 0.40 -5.15 15 18 H -0.26 -5.44 7.11 56.52 0.40 -5.04 15 19 C -0.14 -3.49 8.27 -39.25 -0.32 -3.82 15 20 H 0.09 0.85 8.14 -51.93 -0.42 0.43 15 21 H 0.08 0.94 8.14 -51.93 -0.42 0.51 15 22 H 0.08 0.74 8.12 -51.93 -0.42 0.32 15 23 H 0.09 1.44 8.08 -51.93 -0.42 1.02 15 24 H 0.09 1.26 8.08 -51.93 -0.42 0.84 15 25 H 0.09 1.79 8.06 -52.48 -0.42 1.37 15 26 H 0.10 2.02 8.06 -52.48 -0.42 1.60 15 27 H 0.28 6.64 8.30 -40.82 -0.34 6.31 15 28 H 0.12 3.14 6.17 -52.48 -0.32 2.82 15 LS Contribution 265.52 15.07 4.00 4.00 Total: -1.00 -29.88 265.52 -7.35 -37.23 By element: Atomic # 1 Polarization: 4.76 SS G_CDS: -2.78 Total: 1.98 kcal Atomic # 6 Polarization: -20.49 SS G_CDS: -2.81 Total: -23.31 kcal Atomic # 7 Polarization: -20.24 SS G_CDS: 0.61 Total: -19.63 kcal Atomic # 8 Polarization: -9.84 SS G_CDS: 0.10 Total: -9.74 kcal Atomic # 14 Polarization: 18.70 SS G_CDS: -5.03 Total: 13.67 kcal Atomic # 17 Polarization: -2.78 SS G_CDS: -1.43 Total: -4.21 kcal Total LS contribution 4.00 Total: 4.00 kcal Total: -29.88 -7.35 -37.23 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307057645.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.776 kcal (2) G-P(sol) polarization free energy of solvation -29.885 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.661 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.233 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds