Wall clock time and date at job start Mon Mar 30 2020 05:41:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 O 1.20758 * 119.99878 * 2 1 4 4 C 1.50699 * 119.99990 * 180.02562 * 2 1 3 5 5 C 1.50703 * 109.47059 * 179.97438 * 4 2 1 6 6 C 1.38635 * 119.87233 * 89.99376 * 5 4 2 7 7 C 1.38728 * 120.48820 * 179.97438 * 6 5 4 8 8 Cl 1.73598 * 119.88938 * 180.02562 * 7 6 5 9 9 C 1.37757 * 120.22131 * 0.02562 * 7 6 5 10 10 C 1.40669 * 119.73363 * 359.97438 * 9 7 6 11 11 C 1.41396 * 120.23870 * 179.97438 * 10 9 7 12 12 H 1.08001 * 120.00432 * 204.34972 * 11 10 9 13 13 C 1.39950 * 119.99966 * 24.35095 * 11 10 9 14 14 N 1.30819 * 119.99516 * 17.82036 * 13 11 10 15 15 Si 1.86794 * 120.00111 * 197.82007 * 13 11 10 16 16 H 1.48500 * 109.47346 * 59.99882 * 15 13 11 17 17 H 1.48493 * 109.47424 * 179.97438 * 15 13 11 18 18 H 1.48503 * 109.47082 * 300.00211 * 15 13 11 19 19 C 1.37602 * 119.86444 * 270.01543 * 5 4 2 20 20 H 1.09001 * 109.46774 * 239.99950 * 1 2 3 21 21 H 1.08996 * 109.47078 * 359.97438 * 1 2 3 22 22 H 1.09000 * 109.47188 * 120.00236 * 1 2 3 23 23 H 1.08997 * 109.47681 * 59.99775 * 4 2 1 24 24 H 1.09006 * 109.46958 * 299.99147 * 4 2 1 25 25 H 1.08002 * 119.75280 * 0.02562 * 6 5 4 26 26 H 1.08002 * 120.13507 * 179.72270 * 9 7 6 27 27 H 0.97005 * 119.99434 * 179.97438 * 14 13 11 28 28 H 1.07999 * 120.11655 * 359.97438 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0458 0.0000 4 6 2.2605 -1.3051 -0.0006 5 6 3.7422 -1.0297 -0.0011 6 6 4.4215 -0.9037 1.2008 7 6 5.7854 -0.6507 1.2153 8 17 6.6207 -0.4964 2.7293 9 6 6.4792 -0.5215 0.0322 10 6 5.7992 -0.6477 -1.1927 11 6 6.5007 -0.5165 -2.4134 12 1 5.9749 -0.2219 -3.3095 13 6 7.8766 -0.7686 -2.4604 14 7 8.4503 -1.4471 -1.5003 15 14 8.8936 -0.1361 -3.8938 16 1 8.7979 1.3446 -3.9535 17 1 10.3123 -0.5327 -3.7074 18 1 8.3790 -0.7167 -5.1601 19 6 4.4153 -0.9039 -1.1946 20 1 -0.3633 -0.5139 0.8900 21 1 -0.3633 1.0276 0.0005 22 1 -0.3633 -0.5139 -0.8900 23 1 1.9972 -1.8763 -0.8907 24 1 1.9973 -1.8770 0.8893 25 1 3.8850 -1.0040 2.1328 26 1 7.5402 -0.3201 0.0451 27 1 9.4039 -1.6222 -1.5330 28 1 3.8837 -1.0026 -2.1296 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307118166.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:41:19 Heat of formation + Delta-G solvation = -43.702492 kcal Electronic energy + Delta-G solvation = -14141.093241 eV Core-core repulsion = 11568.038603 eV Total energy + Delta-G solvation = -2573.054637 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.19125 -37.49318 -35.36072 -33.94868 -31.72979 -29.94554 -29.66506 -26.23471 -25.37832 -20.86169 -20.78055 -19.16943 -17.11831 -15.58097 -15.37938 -15.15280 -14.77375 -14.53633 -13.83630 -13.78900 -12.79807 -12.40243 -12.18993 -12.04188 -11.93688 -11.52485 -11.49020 -11.12028 -10.92880 -10.64423 -10.29274 -10.10287 -9.84980 -9.59575 -9.30150 -9.10524 -7.49248 -7.33442 -6.82609 -4.45236 2.36510 2.67086 2.74542 3.04813 3.06535 3.15159 3.35089 3.89038 4.35989 4.63669 5.21060 5.39525 5.40892 5.53348 5.70814 5.73296 6.04789 6.21207 6.35744 6.64613 6.91588 7.01423 7.18943 7.31339 7.68435 7.80181 7.90263 7.93087 8.09441 8.45538 8.78199 8.80376 10.11318 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.021063 B = 0.008303 C = 0.006311 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1329.021613 B = 3371.437715 C = 4435.672730 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C 0.347 3.653 3 O -0.441 6.441 4 C -0.123 4.123 5 C -0.046 4.046 6 C -0.225 4.225 7 C -0.001 4.001 8 Cl -0.126 7.126 9 C -0.155 4.155 10 C 0.119 3.881 11 C -0.459 4.459 12 H 0.081 0.919 13 C 0.076 3.924 14 N -0.788 5.788 15 Si 0.910 3.090 16 H -0.263 1.263 17 H -0.278 1.278 18 H -0.265 1.265 19 C -0.208 4.208 20 H 0.087 0.913 21 H 0.076 0.924 22 H 0.088 0.912 23 H 0.097 0.903 24 H 0.095 0.905 25 H 0.095 0.905 26 H 0.129 0.871 27 H 0.284 0.716 28 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.316 -0.962 1.513 8.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.260 4.260 2 C 0.221 3.779 3 O -0.313 6.313 4 C -0.161 4.161 5 C -0.046 4.046 6 C -0.245 4.245 7 C -0.028 4.028 8 Cl -0.098 7.098 9 C -0.175 4.175 10 C 0.116 3.884 11 C -0.488 4.488 12 H 0.099 0.901 13 C -0.143 4.143 14 N -0.412 5.412 15 Si 0.734 3.266 16 H -0.187 1.187 17 H -0.202 1.202 18 H -0.189 1.189 19 C -0.228 4.228 20 H 0.106 0.894 21 H 0.095 0.905 22 H 0.106 0.894 23 H 0.116 0.884 24 H 0.113 0.887 25 H 0.113 0.887 26 H 0.147 0.853 27 H 0.095 0.905 28 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -7.677 -0.491 1.715 7.881 hybrid contribution 0.537 0.061 -0.430 0.691 sum -7.140 -0.430 1.285 7.267 Atomic orbital electron populations 1.22335 0.95279 1.04365 1.04063 1.24625 0.91158 0.90814 0.71271 1.90444 1.71899 1.34897 1.34013 1.21046 0.94190 0.96847 1.03971 1.18723 0.91920 1.00579 0.93382 1.19940 0.92317 1.16004 0.96202 1.20633 0.92122 1.05366 0.84646 1.98249 1.79613 1.96837 1.35088 1.21257 1.00670 1.06032 0.89564 1.17426 0.90755 0.87647 0.92566 1.19527 0.92679 1.40880 0.95679 0.90101 1.25942 0.98488 0.92481 0.97391 1.69801 1.12902 1.26809 1.31704 0.86331 0.78355 0.80554 0.81335 1.18704 1.20244 1.18922 1.20852 0.95427 1.11352 0.95178 0.89435 0.90506 0.89360 0.88440 0.88706 0.88665 0.85307 0.90535 0.88653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.08 10.26 36.01 0.37 -1.72 15 2 C 0.35 5.44 7.26 -29.03 -0.21 5.23 15 3 O -0.44 -9.13 16.76 6.00 0.10 -9.03 15 4 C -0.12 -1.94 5.76 -29.03 -0.17 -2.11 15 5 C -0.05 -0.99 4.37 -104.71 -0.46 -1.45 15 6 C -0.22 -5.11 9.49 -39.25 -0.37 -5.48 15 7 C 0.00 -0.04 6.31 -39.58 -0.25 -0.29 15 8 Cl -0.13 -2.70 28.95 -51.86 -1.50 -4.20 15 9 C -0.16 -4.11 8.47 -38.84 -0.33 -4.44 15 10 C 0.12 3.17 5.58 -106.83 -0.60 2.57 15 11 C -0.46 -12.04 9.05 -37.74 -0.34 -12.38 15 12 H 0.08 2.03 7.91 -52.49 -0.41 1.61 15 13 C 0.08 1.88 5.14 -17.34 -0.09 1.80 15 14 N -0.79 -20.23 10.95 55.55 0.61 -19.62 15 15 Si 0.91 18.54 29.59 -169.99 -5.03 13.51 15 16 H -0.26 -5.36 7.11 56.52 0.40 -4.96 15 17 H -0.28 -5.50 7.11 56.52 0.40 -5.10 15 18 H -0.26 -5.28 7.11 56.52 0.40 -4.88 15 19 C -0.21 -5.02 9.44 -38.87 -0.37 -5.39 15 20 H 0.09 0.71 8.14 -51.93 -0.42 0.28 15 21 H 0.08 0.80 8.12 -51.93 -0.42 0.38 15 22 H 0.09 0.72 8.14 -51.93 -0.42 0.30 15 23 H 0.10 1.32 8.08 -51.93 -0.42 0.90 15 24 H 0.09 1.26 8.08 -51.93 -0.42 0.84 15 25 H 0.10 1.97 8.06 -52.49 -0.42 1.54 15 26 H 0.13 3.54 6.16 -52.49 -0.32 3.22 15 27 H 0.28 6.65 8.30 -40.82 -0.34 6.31 15 28 H 0.10 2.14 8.06 -52.49 -0.42 1.72 15 LS Contribution 267.72 15.07 4.03 4.03 Total: -1.00 -29.37 267.72 -7.42 -36.80 By element: Atomic # 1 Polarization: 4.99 SS G_CDS: -2.82 Total: 2.16 kcal Atomic # 6 Polarization: -20.85 SS G_CDS: -2.81 Total: -23.66 kcal Atomic # 7 Polarization: -20.23 SS G_CDS: 0.61 Total: -19.62 kcal Atomic # 8 Polarization: -9.13 SS G_CDS: 0.10 Total: -9.03 kcal Atomic # 14 Polarization: 18.54 SS G_CDS: -5.03 Total: 13.51 kcal Atomic # 17 Polarization: -2.70 SS G_CDS: -1.50 Total: -4.20 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -29.37 -7.42 -36.80 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307118166.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.906 kcal (2) G-P(sol) polarization free energy of solvation -29.374 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.280 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.797 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.702 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds