Wall clock time and date at job start Mon Mar 30 2020 05:41:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 O 1.20759 * 120.00380 * 2 1 4 4 C 1.50700 * 119.99986 * 179.72101 * 2 1 3 5 5 H 1.08995 * 109.47348 * 155.27726 * 4 2 1 6 6 Cl 1.80299 * 109.47320 * 35.27336 * 4 2 1 7 7 C 1.50711 * 109.47119 * 275.27335 * 4 2 1 8 8 C 1.37643 * 120.12066 * 95.00209 * 7 4 2 9 9 C 1.38616 * 120.24077 * 179.97438 * 8 7 4 10 10 C 1.38660 * 120.50528 * 0.02562 * 9 8 7 11 11 C 1.37590 * 120.24548 * 0.02562 * 10 9 8 12 12 C 1.40690 * 120.12882 * 274.72805 * 7 4 2 13 13 C 1.41395 * 120.24598 * 359.97438 * 12 7 4 14 14 H 1.08007 * 119.99594 * 329.37747 * 13 12 7 15 15 C 1.39940 * 120.00345 * 149.38144 * 13 12 7 16 16 N 1.30825 * 120.00490 * 162.27816 * 15 13 12 17 17 Si 1.86804 * 119.99850 * 342.27725 * 15 13 12 18 18 H 1.48507 * 109.47057 * 95.38587 * 17 15 13 19 19 H 1.48500 * 109.47184 * 215.38478 * 17 15 13 20 20 H 1.48501 * 109.47071 * 335.39025 * 17 15 13 21 21 H 1.09003 * 109.46706 * 0.02562 * 1 2 3 22 22 H 1.08999 * 109.46835 * 120.00231 * 1 2 3 23 23 H 1.09005 * 109.46756 * 240.00274 * 1 2 3 24 24 H 1.07993 * 119.88201 * 359.97438 * 8 7 4 25 25 H 1.07999 * 119.74609 * 180.02562 * 9 8 7 26 26 H 1.07997 * 119.87396 * 180.02562 * 10 9 8 27 27 H 1.07999 * 120.12471 * 179.97438 * 11 10 9 28 28 H 0.96995 * 119.99938 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1109 1.0458 0.0000 4 6 2.2605 -1.3051 0.0064 5 1 3.2506 -1.1552 -0.4242 6 17 1.3592 -2.5243 -0.9693 7 6 2.3986 -1.7986 1.4237 8 6 1.4908 -2.6991 1.9331 9 6 1.6157 -3.1550 3.2361 10 6 2.6537 -2.7104 4.0409 11 6 3.5721 -1.8096 3.5529 12 6 3.4591 -1.3449 2.2292 13 6 4.4013 -0.4248 1.7146 14 1 4.6417 -0.4301 0.6616 15 6 5.0223 0.4927 2.5694 16 7 6.1198 1.0977 2.1938 17 14 4.2842 0.8538 4.2471 18 1 4.9436 0.0043 5.2712 19 1 4.4932 2.2853 4.5821 20 1 2.8290 0.5586 4.2215 21 1 -0.3633 1.0277 -0.0005 22 1 -0.3633 -0.5139 -0.8900 23 1 -0.3633 -0.5138 0.8901 24 1 0.6782 -3.0517 1.3153 25 1 0.8991 -3.8619 3.6275 26 1 2.7416 -3.0727 5.0545 27 1 4.3795 -1.4643 4.1815 28 1 6.5504 1.7333 2.7866 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307119995.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:41:59 Heat of formation + Delta-G solvation = -35.962395 kcal Electronic energy + Delta-G solvation = -14805.880081 eV Core-core repulsion = 12233.161080 eV Total energy + Delta-G solvation = -2572.719002 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 238.050 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -39.15538 -37.74183 -35.54911 -33.71393 -31.88329 -30.54142 -29.54993 -26.65617 -24.94830 -21.55430 -20.58301 -18.89320 -17.48389 -16.11628 -15.45620 -15.31626 -14.87298 -14.19390 -14.01182 -13.68697 -12.87071 -12.67622 -12.15958 -12.12727 -11.91808 -11.74238 -11.59919 -10.99130 -10.87505 -10.59810 -10.49095 -10.21929 -9.80549 -9.56329 -9.24863 -9.12576 -7.75843 -7.72085 -7.04003 -4.60575 2.03727 2.51385 2.60766 2.84218 3.04835 3.16183 3.25538 3.90473 4.35934 4.54690 5.19525 5.43631 5.47903 5.69994 5.78841 5.91773 6.00417 6.04142 6.27841 6.39392 6.57861 6.77594 7.05961 7.22945 7.47065 7.57612 7.71610 7.92378 7.97399 8.23405 8.47257 8.66551 9.97659 Molecular weight = 238.05amu Principal moments of inertia in cm(-1) A = 0.023670 B = 0.011761 C = 0.009420 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1182.636107 B = 2380.252360 C = 2971.693967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.363 3.637 3 O -0.430 6.430 4 C 0.034 3.966 5 H 0.125 0.875 6 Cl -0.187 7.187 7 C -0.216 4.216 8 C -0.053 4.053 9 C -0.248 4.248 10 C -0.069 4.069 11 C -0.234 4.234 12 C 0.107 3.893 13 C -0.436 4.436 14 H 0.094 0.906 15 C 0.089 3.911 16 N -0.796 5.796 17 Si 0.911 3.089 18 H -0.269 1.269 19 H -0.289 1.289 20 H -0.245 1.245 21 H 0.077 0.923 22 H 0.092 0.908 23 H 0.093 0.907 24 H 0.107 0.893 25 H 0.096 0.904 26 H 0.095 0.905 27 H 0.103 0.897 28 H 0.287 0.713 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.015 -3.199 -0.956 8.683 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.259 4.259 2 C 0.236 3.764 3 O -0.302 6.302 4 C -0.010 4.010 5 H 0.142 0.858 6 Cl -0.161 7.161 7 C -0.217 4.217 8 C -0.071 4.071 9 C -0.268 4.268 10 C -0.087 4.087 11 C -0.253 4.253 12 C 0.103 3.897 13 C -0.463 4.463 14 H 0.112 0.888 15 C -0.132 4.132 16 N -0.419 5.419 17 Si 0.737 3.263 18 H -0.195 1.195 19 H -0.216 1.216 20 H -0.168 1.168 21 H 0.096 0.904 22 H 0.111 0.889 23 H 0.112 0.888 24 H 0.125 0.875 25 H 0.114 0.886 26 H 0.114 0.886 27 H 0.121 0.879 28 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -7.513 -2.516 -1.056 7.993 hybrid contribution -0.125 0.021 0.746 0.756 sum -7.638 -2.496 -0.311 8.042 Atomic orbital electron populations 1.22284 0.94546 1.04292 1.04786 1.24488 0.91844 0.89343 0.70698 1.90462 1.71863 1.33480 1.34361 1.23380 0.97457 0.86907 0.93276 0.85766 1.98658 1.79706 1.62881 1.74851 1.18980 1.00528 1.08788 0.93441 1.20625 0.96778 0.94897 0.94782 1.20378 1.02591 1.08372 0.95410 1.20695 0.94396 0.96036 0.97618 1.21006 1.02411 1.04338 0.97528 1.17438 0.89689 0.91505 0.91048 1.19498 1.16453 1.12655 0.97743 0.88802 1.26127 0.92611 0.94330 1.00149 1.69669 1.13326 1.20739 1.38166 0.86324 0.82520 0.76684 0.80778 1.19527 1.21583 1.16776 0.90365 0.88913 0.88811 0.87504 0.88554 0.88648 0.87902 0.90231 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.95 9.59 36.01 0.35 -2.61 15 2 C 0.36 6.98 6.37 -29.03 -0.18 6.79 15 3 O -0.43 -9.81 17.81 6.00 0.11 -9.70 15 4 C 0.03 0.66 2.90 -29.03 -0.08 0.57 15 5 H 0.12 2.61 6.52 -51.93 -0.34 2.27 15 6 Cl -0.19 -3.06 25.31 -51.86 -1.31 -4.37 15 7 C -0.22 -4.68 5.06 -103.91 -0.53 -5.21 15 8 C -0.05 -1.04 9.15 -39.66 -0.36 -1.41 15 9 C -0.25 -4.89 10.05 -39.29 -0.39 -5.29 15 10 C -0.07 -1.44 10.02 -39.66 -0.40 -1.83 15 11 C -0.23 -5.46 7.16 -38.87 -0.28 -5.73 15 12 C 0.11 2.60 5.09 -106.83 -0.54 2.06 15 13 C -0.44 -11.46 8.89 -37.74 -0.34 -11.80 15 14 H 0.09 2.59 6.64 -52.48 -0.35 2.24 15 15 C 0.09 2.31 5.41 -17.34 -0.09 2.21 15 16 N -0.80 -21.10 13.93 55.55 0.77 -20.33 15 17 Si 0.91 20.82 24.52 -169.99 -4.17 16.65 15 18 H -0.27 -5.88 6.72 56.52 0.38 -5.50 15 19 H -0.29 -6.42 7.11 56.52 0.40 -6.02 15 20 H -0.24 -5.75 6.85 56.52 0.39 -5.36 15 21 H 0.08 1.06 8.12 -51.93 -0.42 0.63 15 22 H 0.09 1.16 7.36 -51.93 -0.38 0.78 15 23 H 0.09 1.32 8.14 -51.93 -0.42 0.89 15 24 H 0.11 1.87 6.62 -52.49 -0.35 1.52 15 25 H 0.10 1.64 8.06 -52.49 -0.42 1.22 15 26 H 0.10 1.71 8.06 -52.49 -0.42 1.29 15 27 H 0.10 2.40 4.77 -52.49 -0.25 2.15 15 28 H 0.29 6.90 8.30 -40.82 -0.34 6.56 15 LS Contribution 254.51 15.07 3.84 3.84 Total: -1.00 -27.30 254.51 -6.15 -33.44 By element: Atomic # 1 Polarization: 5.22 SS G_CDS: -2.53 Total: 2.69 kcal Atomic # 6 Polarization: -19.37 SS G_CDS: -2.86 Total: -22.23 kcal Atomic # 7 Polarization: -21.10 SS G_CDS: 0.77 Total: -20.33 kcal Atomic # 8 Polarization: -9.81 SS G_CDS: 0.11 Total: -9.70 kcal Atomic # 14 Polarization: 20.82 SS G_CDS: -4.17 Total: 16.65 kcal Atomic # 17 Polarization: -3.06 SS G_CDS: -1.31 Total: -4.37 kcal Total LS contribution 3.84 Total: 3.84 kcal Total: -27.30 -6.15 -33.44 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307119995.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.519 kcal (2) G-P(sol) polarization free energy of solvation -27.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.444 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds